Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11818:11817
Extra
PDB:
ATOM 1 O3' U A1817 30.093 56.833 112.116 1.00 55.29 O
ATOM 2 P A A1818 31.547 56.727 111.455 1.00 59.60 P
ATOM 3 OP1 A A1818 32.510 57.141 112.521 1.00 60.07 O
ATOM 4 OP2 A A1818 31.517 57.501 110.176 1.00 59.55 O
ATOM 5 O5' A A1818 31.693 55.159 111.161 1.00 58.84 O
ATOM 6 C5' A A1818 32.220 54.312 112.164 1.00 58.77 C
ATOM 7 C4' A A1818 32.150 52.865 111.790 1.00 58.06 C
ATOM 8 O4' A A1818 30.815 52.533 111.354 1.00 57.85 O
ATOM 9 C3' A A1818 33.043 52.425 110.652 1.00 57.51 C
ATOM 10 O3' A A1818 34.349 52.152 111.091 1.00 57.50 O
ATOM 11 C2' A A1818 32.343 51.187 110.162 1.00 56.90 C
ATOM 12 O2' A A1818 32.624 50.123 111.056 1.00 56.74 O
ATOM 13 C1' A A1818 30.871 51.593 110.309 1.00 57.16 C
ATOM 14 N9 A A1818 30.346 52.249 109.091 1.00 57.09 N
ATOM 15 C8 A A1818 30.115 53.590 109.026 1.00 57.62 C
ATOM 16 N7 A A1818 29.659 54.009 107.899 1.00 57.50 N
ATOM 17 C5 A A1818 29.593 52.874 107.164 1.00 56.83 C
ATOM 18 C6 A A1818 29.196 52.716 105.866 1.00 56.44 C
ATOM 19 N6 A A1818 28.793 53.754 105.156 1.00 56.69 N
ATOM 20 N1 A A1818 29.215 51.472 105.345 1.00 55.80 N
ATOM 21 C2 A A1818 29.638 50.460 106.118 1.00 55.59 C
ATOM 22 N3 A A1818 30.061 50.505 107.382 1.00 55.93 N
ATOM 23 C4 A A1818 30.005 51.767 107.856 1.00 56.56 C
ATOM 24 P G A1819 35.608 52.428 110.148 1.00 56.30 P
ATOM 25 OP1 G A1819 36.798 52.047 110.930 1.00 56.36 O
ATOM 26 OP2 G A1819 35.493 53.813 109.638 1.00 56.72 O
ATOM 27 O5' G A1819 35.405 51.399 108.969 1.00 55.55 O
TER
ATOM 1 O3' C B1816 26.609 59.891 108.247 1.00 56.18 O
ATOM 2 P U B1817 28.143 59.394 108.251 1.00 55.37 P
ATOM 3 OP1 U B1817 28.976 60.558 108.658 1.00 55.97 O
ATOM 4 OP2 U B1817 28.401 58.770 106.930 1.00 54.71 O
ATOM 5 O5' U B1817 28.170 58.277 109.400 1.00 55.20 O
ATOM 6 C5' U B1817 27.792 58.589 110.736 1.00 55.76 C
ATOM 7 C4' U B1817 27.779 57.364 111.611 1.00 55.48 C
ATOM 8 O4' U B1817 26.605 56.552 111.338 1.00 55.12 O
ATOM 9 C3' U B1817 28.944 56.412 111.423 1.00 54.95 C
ATOM 10 O3' U B1817 30.093 56.833 112.116 1.00 55.29 O
ATOM 11 C2' U B1817 28.382 55.076 111.913 1.00 54.56 C
ATOM 12 O2' U B1817 28.406 54.982 113.323 1.00 54.96 O
ATOM 13 C1' U B1817 26.932 55.178 111.463 1.00 54.55 C
ATOM 14 N1 U B1817 26.714 54.509 110.157 1.00 53.90 N
ATOM 15 C2 U B1817 26.526 53.157 110.166 1.00 53.35 C
ATOM 16 O2 U B1817 26.530 52.501 111.196 1.00 53.39 O
ATOM 17 N3 U B1817 26.309 52.583 108.949 1.00 52.78 N
ATOM 18 C4 U B1817 26.264 53.213 107.749 1.00 52.70 C
ATOM 19 O4 U B1817 26.045 52.575 106.732 1.00 52.18 O
ATOM 20 C5 U B1817 26.485 54.607 107.816 1.00 53.28 C
ATOM 21 C6 U B1817 26.702 55.189 108.984 1.00 53.84 C
ATOM 22 P A B1818 31.547 56.727 111.455 1.00 59.60 P
ATOM 23 OP1 A B1818 32.510 57.141 112.521 1.00 60.07 O
ATOM 24 OP2 A B1818 31.517 57.501 110.176 1.00 59.55 O
ATOM 25 O5' A B1818 31.693 55.159 111.161 1.00 58.84 O
TER
ATOM 2 P A A1818 31.547 56.727 111.455 1.00 59.60 P
ATOM 3 OP1 A A1818 32.510 57.141 112.521 1.00 60.07 O
ATOM 4 OP2 A A1818 31.517 57.501 110.176 1.00 59.55 O
ATOM 5 O5' A A1818 31.693 55.159 111.161 1.00 58.84 O
ATOM 6 C5' A A1818 32.220 54.312 112.164 1.00 58.77 C
ATOM 7 C4' A A1818 32.150 52.865 111.790 1.00 58.06 C
ATOM 8 O4' A A1818 30.815 52.533 111.354 1.00 57.85 O
ATOM 9 C3' A A1818 33.043 52.425 110.652 1.00 57.51 C
ATOM 10 O3' A A1818 34.349 52.152 111.091 1.00 57.50 O
ATOM 11 C2' A A1818 32.343 51.187 110.162 1.00 56.90 C
ATOM 12 O2' A A1818 32.624 50.123 111.056 1.00 56.74 O
ATOM 13 C1' A A1818 30.871 51.593 110.309 1.00 57.16 C
ATOM 14 N9 A A1818 30.346 52.249 109.091 1.00 57.09 N
ATOM 15 C8 A A1818 30.115 53.590 109.026 1.00 57.62 C
ATOM 16 N7 A A1818 29.659 54.009 107.899 1.00 57.50 N
ATOM 17 C5 A A1818 29.593 52.874 107.164 1.00 56.83 C
ATOM 18 C6 A A1818 29.196 52.716 105.866 1.00 56.44 C
ATOM 19 N6 A A1818 28.793 53.754 105.156 1.00 56.69 N
ATOM 20 N1 A A1818 29.215 51.472 105.345 1.00 55.80 N
ATOM 21 C2 A A1818 29.638 50.460 106.118 1.00 55.59 C
ATOM 22 N3 A A1818 30.061 50.505 107.382 1.00 55.93 N
ATOM 23 C4 A A1818 30.005 51.767 107.856 1.00 56.56 C
ATOM 24 P G A1819 35.608 52.428 110.148 1.00 56.30 P
ATOM 25 OP1 G A1819 36.798 52.047 110.930 1.00 56.36 O
ATOM 26 OP2 G A1819 35.493 53.813 109.638 1.00 56.72 O
ATOM 27 O5' G A1819 35.405 51.399 108.969 1.00 55.55 O
TER
ATOM 1 O3' C B1816 26.609 59.891 108.247 1.00 56.18 O
ATOM 2 P U B1817 28.143 59.394 108.251 1.00 55.37 P
ATOM 3 OP1 U B1817 28.976 60.558 108.658 1.00 55.97 O
ATOM 4 OP2 U B1817 28.401 58.770 106.930 1.00 54.71 O
ATOM 5 O5' U B1817 28.170 58.277 109.400 1.00 55.20 O
ATOM 6 C5' U B1817 27.792 58.589 110.736 1.00 55.76 C
ATOM 7 C4' U B1817 27.779 57.364 111.611 1.00 55.48 C
ATOM 8 O4' U B1817 26.605 56.552 111.338 1.00 55.12 O
ATOM 9 C3' U B1817 28.944 56.412 111.423 1.00 54.95 C
ATOM 10 O3' U B1817 30.093 56.833 112.116 1.00 55.29 O
ATOM 11 C2' U B1817 28.382 55.076 111.913 1.00 54.56 C
ATOM 12 O2' U B1817 28.406 54.982 113.323 1.00 54.96 O
ATOM 13 C1' U B1817 26.932 55.178 111.463 1.00 54.55 C
ATOM 14 N1 U B1817 26.714 54.509 110.157 1.00 53.90 N
ATOM 15 C2 U B1817 26.526 53.157 110.166 1.00 53.35 C
ATOM 16 O2 U B1817 26.530 52.501 111.196 1.00 53.39 O
ATOM 17 N3 U B1817 26.309 52.583 108.949 1.00 52.78 N
ATOM 18 C4 U B1817 26.264 53.213 107.749 1.00 52.70 C
ATOM 19 O4 U B1817 26.045 52.575 106.732 1.00 52.18 O
ATOM 20 C5 U B1817 26.485 54.607 107.816 1.00 53.28 C
ATOM 21 C6 U B1817 26.702 55.189 108.984 1.00 53.84 C
ATOM 22 P A B1818 31.547 56.727 111.455 1.00 59.60 P
ATOM 23 OP1 A B1818 32.510 57.141 112.521 1.00 60.07 O
ATOM 24 OP2 A B1818 31.517 57.501 110.176 1.00 59.55 O
ATOM 25 O5' A B1818 31.693 55.159 111.161 1.00 58.84 O
TER
Atoms:
OP1: (32.510,57.141,112.521)
OP2: (31.517,57.501,110.176)
C3': (33.043,52.425,110.652)
C1': (30.871,51.593,110.309)
C5': (32.220,54.312,112.164)
O4': (30.815,52.533,111.354)
C8: (30.115,53.590,109.026)
O2': (32.624,50.123,111.056)
C6: (29.196,52.716,105.866)
C5: (29.593,52.874,107.164)
C4: (30.005,51.767,107.856)
P: (31.547,56.727,111.455)
C4': (32.150,52.865,111.790)
C2': (32.343,51.187,110.162)
C2: (29.638,50.460,106.118)
N1: (29.215,51.472,105.345)
N3: (30.061,50.505,107.382)
N6: (28.793,53.754,105.156)
N7: (29.659,54.009,107.899)
N9: (30.346,52.249,109.091)
O5': (31.693,55.159,111.161)
O3': (34.349,52.152,111.091)
OP2: (31.517,57.501,110.176)
C3': (33.043,52.425,110.652)
C1': (30.871,51.593,110.309)
C5': (32.220,54.312,112.164)
O4': (30.815,52.533,111.354)
C8: (30.115,53.590,109.026)
O2': (32.624,50.123,111.056)
C6: (29.196,52.716,105.866)
C5: (29.593,52.874,107.164)
C4: (30.005,51.767,107.856)
P: (31.547,56.727,111.455)
C4': (32.150,52.865,111.790)
C2': (32.343,51.187,110.162)
C2: (29.638,50.460,106.118)
N1: (29.215,51.472,105.345)
N3: (30.061,50.505,107.382)
N6: (28.793,53.754,105.156)
N7: (29.659,54.009,107.899)
N9: (30.346,52.249,109.091)
O5': (31.693,55.159,111.161)
O3': (34.349,52.152,111.091)
C4: (26.264,53.213,107.749)
N3: (26.309,52.583,108.949)
OP1: (28.976,60.558,108.658)
OP2: (28.401,58.770,106.930)
C2: (26.526,53.157,110.166)
C1': (26.932,55.178,111.463)
C3': (28.944,56.412,111.423)
O5': (28.170,58.277,109.400)
O4': (26.605,56.552,111.338)
C5': (27.792,58.589,110.736)
P: (28.143,59.394,108.251)
C4': (27.779,57.364,111.611)
C2': (28.382,55.076,111.913)
O2': (28.406,54.982,113.323)
N1: (26.714,54.509,110.157)
O4: (26.045,52.575,106.732)
O2: (26.530,52.501,111.196)
C6: (26.702,55.189,108.984)
C5: (26.485,54.607,107.816)
O3': (30.093,56.833,112.116)
N3: (26.309,52.583,108.949)
OP1: (28.976,60.558,108.658)
OP2: (28.401,58.770,106.930)
C2: (26.526,53.157,110.166)
C1': (26.932,55.178,111.463)
C3': (28.944,56.412,111.423)
O5': (28.170,58.277,109.400)
O4': (26.605,56.552,111.338)
C5': (27.792,58.589,110.736)
P: (28.143,59.394,108.251)
C4': (27.779,57.364,111.611)
C2': (28.382,55.076,111.913)
O2': (28.406,54.982,113.323)
N1: (26.714,54.509,110.157)
O4: (26.045,52.575,106.732)
O2: (26.530,52.501,111.196)
C6: (26.702,55.189,108.984)
C5: (26.485,54.607,107.816)
O3': (30.093,56.833,112.116)
Image (generated by PyMOL):