ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:01351:01394

Extra

PDB:
ATOM 1 O3' G A1350 41.663 178.904 84.264 1.00 49.41 O
ATOM 2 P A A1351 42.732 179.837 85.031 1.00 50.88 P
ATOM 3 OP1 A A1351 42.567 179.564 86.480 1.00 52.32 O
ATOM 4 OP2 A A1351 42.626 181.239 84.532 1.00 53.59 O
ATOM 5 O5' A A1351 44.147 179.258 84.586 1.00 51.09 O
ATOM 6 C5' A A1351 44.421 177.851 84.684 1.00 48.85 C
ATOM 7 C4' A A1351 45.904 177.608 84.786 1.00 46.70 C
ATOM 8 O4' A A1351 46.536 177.975 83.527 1.00 46.00 O
ATOM 9 C3' A A1351 46.640 178.388 85.874 1.00 45.63 C
ATOM 10 O3' A A1351 47.592 177.535 86.496 1.00 47.22 O
ATOM 11 C2' A A1351 47.365 179.475 85.080 1.00 44.84 C
ATOM 12 O2' A A1351 48.550 179.914 85.709 1.00 45.16 O
ATOM 13 C1' A A1351 47.700 178.721 83.798 1.00 44.37 C
ATOM 14 N9 A A1351 48.031 179.522 82.616 1.00 45.22 N
ATOM 15 C8 A A1351 47.743 180.838 82.347 1.00 44.12 C
ATOM 16 N7 A A1351 48.173 181.243 81.176 1.00 43.78 N
ATOM 17 C5 A A1351 48.790 180.123 80.640 1.00 43.52 C
ATOM 18 C6 A A1351 49.444 179.894 79.416 1.00 44.47 C
ATOM 19 N6 A A1351 49.582 180.814 78.462 1.00 43.18 N
ATOM 20 N1 A A1351 49.957 178.664 79.199 1.00 44.36 N
ATOM 21 C2 A A1351 49.813 177.738 80.142 1.00 42.71 C
ATOM 22 N3 A A1351 49.213 177.828 81.324 1.00 45.74 N
ATOM 23 C4 A A1351 48.716 179.060 81.516 1.00 44.39 C
ATOM 24 P A A1352 47.254 176.880 87.928 1.00 50.29 P
ATOM 25 OP1 A A1352 46.650 175.543 87.707 1.00 50.08 O
ATOM 26 OP2 A A1352 46.521 177.896 88.733 1.00 49.60 O
ATOM 27 O5' A A1352 48.679 176.669 88.597 1.00 49.61 O
TER

ATOM 1 O3' A B1393 46.716 173.908 77.287 1.00 44.08 O
ATOM 2 P U B1394 46.668 173.788 75.688 1.00 41.59 P
ATOM 3 OP1 U B1394 45.242 173.995 75.330 1.00 43.23 O
ATOM 4 OP2 U B1394 47.369 172.562 75.237 1.00 40.77 O
ATOM 5 O5' U B1394 47.504 175.056 75.215 1.00 44.24 O
ATOM 6 C5' U B1394 47.300 175.654 73.923 1.00 45.40 C
ATOM 7 C4' U B1394 47.786 177.082 73.936 1.00 45.42 C
ATOM 8 O4' U B1394 46.974 177.848 74.870 1.00 46.88 O
ATOM 9 C3' U B1394 49.229 177.265 74.391 1.00 46.90 C
ATOM 10 O3' U B1394 49.818 178.351 73.688 1.00 47.26 O
ATOM 11 C2' U B1394 49.079 177.577 75.877 1.00 46.29 C
ATOM 12 O2' U B1394 50.169 178.295 76.427 1.00 44.82 O
ATOM 13 C1' U B1394 47.790 178.396 75.885 1.00 45.65 C
ATOM 14 N1 U B1394 47.036 178.338 77.147 1.00 46.73 N
ATOM 15 C2 U B1394 46.493 179.520 77.632 1.00 46.65 C
ATOM 16 O2 U B1394 46.618 180.590 77.062 1.00 45.71 O
ATOM 17 N3 U B1394 45.796 179.399 78.813 1.00 44.49 N
ATOM 18 C4 U B1394 45.576 178.242 79.534 1.00 45.69 C
ATOM 19 O4 U B1394 44.913 178.292 80.572 1.00 46.09 O
ATOM 20 C5 U B1394 46.166 177.064 78.970 1.00 45.31 C
ATOM 21 C6 U B1394 46.859 177.149 77.829 1.00 46.75 C
ATOM 22 P C B1395 50.888 178.048 72.533 1.00 48.78 P
ATOM 23 OP1 C B1395 51.337 179.359 71.982 1.00 51.04 O
ATOM 24 OP2 C B1395 50.309 177.029 71.614 1.00 48.72 O
ATOM 25 O5' C B1395 52.099 177.366 73.312 1.00 46.50 O
TER

Atoms:
OP1: (42.567,179.564,86.480)
OP2: (42.626,181.239,84.532)
C3': (46.640,178.388,85.874)
C1': (47.700,178.721,83.798)
C5': (44.421,177.851,84.684)
O4': (46.536,177.975,83.527)
C8: (47.743,180.838,82.347)
O2': (48.550,179.914,85.709)
C6: (49.444,179.894,79.416)
C5: (48.790,180.123,80.640)
C4: (48.716,179.060,81.516)
P: (42.732,179.837,85.031)
C4': (45.904,177.608,84.786)
C2': (47.365,179.475,85.080)
C2: (49.813,177.738,80.142)
N1: (49.957,178.664,79.199)
N3: (49.213,177.828,81.324)
N6: (49.582,180.814,78.462)
N7: (48.173,181.243,81.176)
N9: (48.031,179.522,82.616)
O5': (44.147,179.258,84.586)
O3': (47.592,177.535,86.496)
C4: (45.576,178.242,79.534)
N3: (45.796,179.399,78.813)
OP1: (45.242,173.995,75.330)
OP2: (47.369,172.562,75.237)
C2: (46.493,179.520,77.632)
C1': (47.790,178.396,75.885)
C3': (49.229,177.265,74.391)
O5': (47.504,175.056,75.215)
O4': (46.974,177.848,74.870)
C5': (47.300,175.654,73.923)
P: (46.668,173.788,75.688)
C4': (47.786,177.082,73.936)
C2': (49.079,177.577,75.877)
O2': (50.169,178.295,76.427)
N1: (47.036,178.338,77.147)
O4: (44.913,178.292,80.572)
O2: (46.618,180.590,77.062)
C6: (46.859,177.149,77.829)
C5: (46.166,177.064,78.970)
O3': (49.818,178.351,73.688)
Image (generated by PyMOL):
PyMOL image
show in jmol