ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCM:01166:01165

Extra

PDB:
ATOM 1 O3' U A1165 55.119 85.130 174.719 1.00113.43 O
ATOM 2 P A A1166 53.925 84.192 175.242 1.00110.73 P
ATOM 3 OP1 A A1166 52.699 85.024 175.300 1.00111.30 O
ATOM 4 OP2 A A1166 54.376 83.474 176.457 1.00111.09 O
ATOM 5 O5' A A1166 53.746 83.141 174.062 1.00108.99 O
ATOM 6 C5' A A1166 53.640 81.741 174.340 1.00107.02 C
ATOM 7 C4' A A1166 54.990 81.085 174.203 1.00105.33 C
ATOM 8 O4' A A1166 55.948 81.778 175.039 1.00104.85 O
ATOM 9 C3' A A1166 55.037 79.645 174.677 1.00104.31 C
ATOM 10 O3' A A1166 54.624 78.780 173.625 1.00102.65 O
ATOM 11 C2' A A1166 56.506 79.462 175.043 1.00104.08 C
ATOM 12 O2' A A1166 57.323 79.204 173.920 1.00105.16 O
ATOM 13 C1' A A1166 56.859 80.846 175.594 1.00103.83 C
ATOM 14 N9 A A1166 56.804 80.966 177.049 1.00102.63 N
ATOM 15 C8 A A1166 56.155 81.926 177.786 1.00102.12 C
ATOM 16 N7 A A1166 56.304 81.791 179.079 1.00101.71 N
ATOM 17 C5 A A1166 57.100 80.662 179.205 1.00101.83 C
ATOM 18 C6 A A1166 57.619 79.995 180.323 1.00101.63 C
ATOM 19 N6 A A1166 57.400 80.383 181.581 1.00101.27 N
ATOM 20 N1 A A1166 58.382 78.901 180.104 1.00101.89 N
ATOM 21 C2 A A1166 58.598 78.512 178.840 1.00101.83 C
ATOM 22 N3 A A1166 58.163 79.056 177.706 1.00101.57 N
ATOM 23 C4 A A1166 57.412 80.141 177.962 1.00102.07 C
ATOM 24 P C A1167 53.161 78.125 173.663 1.00100.74 P
ATOM 25 OP1 C A1167 52.992 77.305 172.435 1.00101.24 O
ATOM 26 OP2 C A1167 52.171 79.189 173.981 1.00100.10 O
ATOM 27 O5' C A1167 53.238 77.135 174.901 1.00 99.30 O
TER

ATOM 1 O3' U B1164 55.318 90.041 177.278 1.00122.39 O
ATOM 2 P U B1165 54.477 88.682 177.427 1.00121.33 P
ATOM 3 OP1 U B1165 53.096 88.952 176.954 1.00120.90 O
ATOM 4 OP2 U B1165 54.696 88.147 178.798 1.00121.35 O
ATOM 5 O5' U B1165 55.169 87.696 176.388 1.00119.97 O
ATOM 6 C5' U B1165 56.590 87.514 176.387 1.00118.14 C
ATOM 7 C4' U B1165 56.985 86.551 175.301 1.00117.00 C
ATOM 8 O4' U B1165 58.420 86.332 175.335 1.00117.73 O
ATOM 9 C3' U B1165 56.350 85.177 175.431 1.00115.89 C
ATOM 10 O3' U B1165 55.119 85.130 174.719 1.00113.43 O
ATOM 11 C2' U B1165 57.431 84.254 174.885 1.00116.61 C
ATOM 12 O2' U B1165 57.478 84.239 173.470 1.00116.20 O
ATOM 13 C1' U B1165 58.685 84.945 175.424 1.00117.00 C
ATOM 14 N1 U B1165 58.982 84.647 176.834 1.00117.01 N
ATOM 15 C2 U B1165 59.780 83.551 177.116 1.00117.12 C
ATOM 16 O2 U B1165 60.212 82.802 176.254 1.00117.04 O
ATOM 17 N3 U B1165 60.052 83.364 178.450 1.00117.22 N
ATOM 18 C4 U B1165 59.612 84.138 179.507 1.00116.81 C
ATOM 19 O4 U B1165 59.988 83.872 180.649 1.00116.23 O
ATOM 20 C5 U B1165 58.774 85.236 179.135 1.00116.41 C
ATOM 21 C6 U B1165 58.493 85.447 177.846 1.00116.59 C
ATOM 22 P A B1166 53.925 84.192 175.242 1.00110.73 P
ATOM 23 OP1 A B1166 52.699 85.024 175.300 1.00111.30 O
ATOM 24 OP2 A B1166 54.376 83.474 176.457 1.00111.09 O
ATOM 25 O5' A B1166 53.746 83.141 174.062 1.00108.99 O
TER

Atoms:
OP1: (52.699,85.024,175.300)
OP2: (54.376,83.474,176.457)
C3': (55.037,79.645,174.677)
C1': (56.859,80.846,175.594)
C5': (53.640,81.741,174.340)
O4': (55.948,81.778,175.039)
C8: (56.155,81.926,177.786)
O2': (57.323,79.204,173.920)
C6: (57.619,79.995,180.323)
C5: (57.100,80.662,179.205)
C4: (57.412,80.141,177.962)
P: (53.925,84.192,175.242)
C4': (54.990,81.085,174.203)
C2': (56.506,79.462,175.043)
C2: (58.598,78.512,178.840)
N1: (58.382,78.901,180.104)
N3: (58.163,79.056,177.706)
N6: (57.400,80.383,181.581)
N7: (56.304,81.791,179.079)
N9: (56.804,80.966,177.049)
O5': (53.746,83.141,174.062)
O3': (54.624,78.780,173.625)
C4: (59.612,84.138,179.507)
N3: (60.052,83.364,178.450)
OP1: (53.096,88.952,176.954)
OP2: (54.696,88.147,178.798)
C2: (59.780,83.551,177.116)
C1': (58.685,84.945,175.424)
C3': (56.350,85.177,175.431)
O5': (55.169,87.696,176.388)
O4': (58.420,86.332,175.335)
C5': (56.590,87.514,176.387)
P: (54.477,88.682,177.427)
C4': (56.985,86.551,175.301)
C2': (57.431,84.254,174.885)
O2': (57.478,84.239,173.470)
N1: (58.982,84.647,176.834)
O4: (59.988,83.872,180.649)
O2: (60.212,82.802,176.254)
C6: (58.493,85.447,177.846)
C5: (58.774,85.236,179.135)
O3': (55.119,85.130,174.719)
Image (generated by PyMOL):
PyMOL image
show in jmol