ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02718:02717

Extra

PDB:
ATOM 1 O3' U A2717 105.619 210.637 112.533 1.00 85.81 O
ATOM 2 P A A2718 104.345 209.778 113.004 1.00 85.19 P
ATOM 3 OP1 A A2718 103.783 210.417 114.224 1.00 84.97 O
ATOM 4 OP2 A A2718 104.782 208.359 113.054 1.00 84.57 O
ATOM 5 O5' A A2718 103.294 209.964 111.818 1.00 84.31 O
ATOM 6 C5' A A2718 102.769 211.267 111.498 1.00 83.12 C
ATOM 7 C4' A A2718 102.242 211.295 110.082 1.00 83.52 C
ATOM 8 O4' A A2718 103.286 210.859 109.173 1.00 83.76 O
ATOM 9 C3' A A2718 101.085 210.363 109.758 1.00 84.06 C
ATOM 10 O3' A A2718 99.838 210.913 110.168 1.00 85.39 O
ATOM 11 C2' A A2718 101.186 210.246 108.240 1.00 83.83 C
ATOM 12 O2' A A2718 100.658 211.353 107.537 1.00 83.43 O
ATOM 13 C1' A A2718 102.701 210.229 108.043 1.00 82.80 C
ATOM 14 N9 A A2718 103.241 208.878 107.924 1.00 81.83 N
ATOM 15 C8 A A2718 103.843 208.102 108.885 1.00 81.80 C
ATOM 16 N7 A A2718 104.234 206.930 108.448 1.00 81.94 N
ATOM 17 C5 A A2718 103.863 206.932 107.109 1.00 81.95 C
ATOM 18 C6 A A2718 104.007 205.977 106.082 1.00 82.54 C
ATOM 19 N6 A A2718 104.595 204.789 106.249 1.00 82.80 N
ATOM 20 N1 A A2718 103.523 206.292 104.859 1.00 82.75 N
ATOM 21 C2 A A2718 102.940 207.489 104.689 1.00 83.18 C
ATOM 22 N3 A A2718 102.752 208.470 105.573 1.00 82.66 N
ATOM 23 C4 A A2718 103.243 208.123 106.777 1.00 81.91 C
ATOM 24 P A A2719 98.590 209.938 110.457 1.00 85.44 P
ATOM 25 OP1 A A2719 97.414 210.809 110.728 1.00 85.08 O
ATOM 26 OP2 A A2719 99.005 208.934 111.470 1.00 84.88 O
ATOM 27 O5' A A2719 98.352 209.187 109.070 1.00 83.51 O
TER

ATOM 1 O3' G B2716 108.368 205.557 110.476 1.00 76.85 O
ATOM 2 P U B2717 109.206 206.861 110.901 1.00 78.73 P
ATOM 3 OP1 U B2717 109.834 207.388 109.661 1.00 78.86 O
ATOM 4 OP2 U B2717 110.060 206.492 112.064 1.00 78.18 O
ATOM 5 O5' U B2717 108.095 207.902 111.383 1.00 79.96 O
ATOM 6 C5' U B2717 108.454 209.088 112.133 1.00 81.97 C
ATOM 7 C4' U B2717 107.819 210.320 111.514 1.00 83.18 C
ATOM 8 O4' U B2717 108.330 210.500 110.167 1.00 82.98 O
ATOM 9 C3' U B2717 106.309 210.278 111.335 1.00 84.82 C
ATOM 10 O3' U B2717 105.619 210.637 112.533 1.00 85.81 O
ATOM 11 C2' U B2717 106.082 211.281 110.209 1.00 83.89 C
ATOM 12 O2' U B2717 106.099 212.624 110.649 1.00 83.43 O
ATOM 13 C1' U B2717 107.311 211.032 109.334 1.00 82.75 C
ATOM 14 N1 U B2717 107.097 210.110 108.205 1.00 82.07 N
ATOM 15 C2 U B2717 106.496 210.614 107.056 1.00 82.42 C
ATOM 16 O2 U B2717 106.100 211.766 106.958 1.00 82.91 O
ATOM 17 N3 U B2717 106.374 209.714 106.026 1.00 81.73 N
ATOM 18 C4 U B2717 106.771 208.391 106.026 1.00 82.37 C
ATOM 19 O4 U B2717 106.619 207.714 105.008 1.00 83.67 O
ATOM 20 C5 U B2717 107.358 207.941 107.252 1.00 81.75 C
ATOM 21 C6 U B2717 107.495 208.792 108.273 1.00 81.45 C
ATOM 22 P A B2718 104.345 209.778 113.004 1.00 85.19 P
ATOM 23 OP1 A B2718 103.783 210.417 114.224 1.00 84.97 O
ATOM 24 OP2 A B2718 104.782 208.359 113.054 1.00 84.57 O
ATOM 25 O5' A B2718 103.294 209.964 111.818 1.00 84.31 O
TER

Atoms:
OP1: (103.783,210.417,114.224)
OP2: (104.782,208.359,113.054)
C3': (101.085,210.363,109.758)
C1': (102.701,210.229,108.043)
C5': (102.769,211.267,111.498)
O4': (103.286,210.859,109.173)
C8: (103.843,208.102,108.885)
O2': (100.658,211.353,107.537)
C6: (104.007,205.977,106.082)
C5: (103.863,206.932,107.109)
C4: (103.243,208.123,106.777)
P: (104.345,209.778,113.004)
C4': (102.242,211.295,110.082)
C2': (101.186,210.246,108.240)
C2: (102.940,207.489,104.689)
N1: (103.523,206.292,104.859)
N3: (102.752,208.470,105.573)
N6: (104.595,204.789,106.249)
N7: (104.234,206.930,108.448)
N9: (103.241,208.878,107.924)
O5': (103.294,209.964,111.818)
O3': (99.838,210.913,110.168)
C4: (106.771,208.391,106.026)
N3: (106.374,209.714,106.026)
OP1: (109.834,207.388,109.661)
OP2: (110.060,206.492,112.064)
C2: (106.496,210.614,107.056)
C1': (107.311,211.032,109.334)
C3': (106.309,210.278,111.335)
O5': (108.095,207.902,111.383)
O4': (108.330,210.500,110.167)
C5': (108.454,209.088,112.133)
P: (109.206,206.861,110.901)
C4': (107.819,210.320,111.514)
C2': (106.082,211.281,110.209)
O2': (106.099,212.624,110.649)
N1: (107.097,210.110,108.205)
O4: (106.619,207.714,105.008)
O2: (106.100,211.766,106.958)
C6: (107.495,208.792,108.273)
C5: (107.358,207.941,107.252)
O3': (105.619,210.637,112.533)
Image (generated by PyMOL):
PyMOL image
show in jmol