Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1351:A1394
Extra
PDB:
ATOM 1 O3' G A1350 41.828 178.957 84.268 1.00 47.95 O
ATOM 2 P A A1351 42.958 179.784 85.051 1.00 47.70 P
ATOM 3 OP1 A A1351 42.855 179.379 86.467 1.00 46.25 O
ATOM 4 OP2 A A1351 42.790 181.205 84.688 1.00 49.46 O
ATOM 5 O5' A A1351 44.353 179.266 84.470 1.00 47.21 O
ATOM 6 C5' A A1351 44.714 177.872 84.531 1.00 44.31 C
ATOM 7 C4' A A1351 46.204 177.710 84.755 1.00 42.93 C
ATOM 8 O4' A A1351 46.941 178.044 83.556 1.00 41.33 O
ATOM 9 C3' A A1351 46.840 178.518 85.870 1.00 43.08 C
ATOM 10 O3' A A1351 47.782 177.705 86.491 1.00 46.63 O
ATOM 11 C2' A A1351 47.604 179.603 85.137 1.00 42.31 C
ATOM 12 O2' A A1351 48.748 179.979 85.863 1.00 42.99 O
ATOM 13 C1' A A1351 48.036 178.857 83.886 1.00 41.69 C
ATOM 14 N9 A A1351 48.344 179.694 82.725 1.00 41.17 N
ATOM 15 C8 A A1351 48.008 181.000 82.475 1.00 41.68 C
ATOM 16 N7 A A1351 48.452 181.448 81.326 1.00 40.67 N
ATOM 17 C5 A A1351 49.120 180.365 80.781 1.00 38.85 C
ATOM 18 C6 A A1351 49.821 180.194 79.583 1.00 37.30 C
ATOM 19 N6 A A1351 49.964 181.149 78.672 1.00 35.37 N
ATOM 20 N1 A A1351 50.384 178.989 79.350 1.00 37.43 N
ATOM 21 C2 A A1351 50.245 178.031 80.267 1.00 37.81 C
ATOM 22 N3 A A1351 49.611 178.071 81.428 1.00 39.70 N
ATOM 23 C4 A A1351 49.064 179.280 81.631 1.00 40.20 C
ATOM 24 P A A1352 47.416 177.030 87.886 1.00 51.68 P
ATOM 25 OP1 A A1352 46.799 175.713 87.562 1.00 51.85 O
ATOM 26 OP2 A A1352 46.642 178.022 88.687 1.00 49.93 O
ATOM 27 O5' A A1352 48.838 176.865 88.578 1.00 48.02 O
TER
ATOM 1 O3' A B1393 47.312 174.446 77.211 1.00 49.26 O
ATOM 2 P U B1394 47.186 174.337 75.627 1.00 49.29 P
ATOM 3 OP1 U B1394 45.747 174.460 75.287 1.00 49.04 O
ATOM 4 OP2 U B1394 47.948 173.134 75.217 1.00 49.86 O
ATOM 5 O5' U B1394 47.996 175.611 75.140 1.00 46.85 O
ATOM 6 C5' U B1394 47.751 176.230 73.882 1.00 44.92 C
ATOM 7 C4' U B1394 48.181 177.664 73.962 1.00 44.26 C
ATOM 8 O4' U B1394 47.349 178.362 74.941 1.00 44.63 O
ATOM 9 C3' U B1394 49.614 177.817 74.447 1.00 42.77 C
ATOM 10 O3' U B1394 50.210 178.938 73.837 1.00 41.17 O
ATOM 11 C2' U B1394 49.449 178.038 75.943 1.00 43.60 C
ATOM 12 O2' U B1394 50.570 178.705 76.481 1.00 44.47 O
ATOM 13 C1' U B1394 48.161 178.867 75.991 1.00 43.19 C
ATOM 14 N1 U B1394 47.405 178.754 77.254 1.00 42.00 N
ATOM 15 C2 U B1394 46.886 179.914 77.815 1.00 43.06 C
ATOM 16 O2 U B1394 47.023 181.029 77.308 1.00 45.21 O
ATOM 17 N3 U B1394 46.200 179.725 78.993 1.00 41.88 N
ATOM 18 C4 U B1394 45.980 178.537 79.650 1.00 40.53 C
ATOM 19 O4 U B1394 45.415 178.548 80.741 1.00 43.63 O
ATOM 20 C5 U B1394 46.533 177.396 79.010 1.00 41.28 C
ATOM 21 C6 U B1394 47.213 177.535 77.868 1.00 41.55 C
ATOM 22 P C B1395 51.261 178.707 72.666 1.00 42.86 P
ATOM 23 OP1 C B1395 51.828 180.013 72.277 1.00 43.69 O
ATOM 24 OP2 C B1395 50.599 177.854 71.643 1.00 43.72 O
ATOM 25 O5' C B1395 52.419 177.908 73.397 1.00 42.13 O
TER
ATOM 2 P A A1351 42.958 179.784 85.051 1.00 47.70 P
ATOM 3 OP1 A A1351 42.855 179.379 86.467 1.00 46.25 O
ATOM 4 OP2 A A1351 42.790 181.205 84.688 1.00 49.46 O
ATOM 5 O5' A A1351 44.353 179.266 84.470 1.00 47.21 O
ATOM 6 C5' A A1351 44.714 177.872 84.531 1.00 44.31 C
ATOM 7 C4' A A1351 46.204 177.710 84.755 1.00 42.93 C
ATOM 8 O4' A A1351 46.941 178.044 83.556 1.00 41.33 O
ATOM 9 C3' A A1351 46.840 178.518 85.870 1.00 43.08 C
ATOM 10 O3' A A1351 47.782 177.705 86.491 1.00 46.63 O
ATOM 11 C2' A A1351 47.604 179.603 85.137 1.00 42.31 C
ATOM 12 O2' A A1351 48.748 179.979 85.863 1.00 42.99 O
ATOM 13 C1' A A1351 48.036 178.857 83.886 1.00 41.69 C
ATOM 14 N9 A A1351 48.344 179.694 82.725 1.00 41.17 N
ATOM 15 C8 A A1351 48.008 181.000 82.475 1.00 41.68 C
ATOM 16 N7 A A1351 48.452 181.448 81.326 1.00 40.67 N
ATOM 17 C5 A A1351 49.120 180.365 80.781 1.00 38.85 C
ATOM 18 C6 A A1351 49.821 180.194 79.583 1.00 37.30 C
ATOM 19 N6 A A1351 49.964 181.149 78.672 1.00 35.37 N
ATOM 20 N1 A A1351 50.384 178.989 79.350 1.00 37.43 N
ATOM 21 C2 A A1351 50.245 178.031 80.267 1.00 37.81 C
ATOM 22 N3 A A1351 49.611 178.071 81.428 1.00 39.70 N
ATOM 23 C4 A A1351 49.064 179.280 81.631 1.00 40.20 C
ATOM 24 P A A1352 47.416 177.030 87.886 1.00 51.68 P
ATOM 25 OP1 A A1352 46.799 175.713 87.562 1.00 51.85 O
ATOM 26 OP2 A A1352 46.642 178.022 88.687 1.00 49.93 O
ATOM 27 O5' A A1352 48.838 176.865 88.578 1.00 48.02 O
TER
ATOM 1 O3' A B1393 47.312 174.446 77.211 1.00 49.26 O
ATOM 2 P U B1394 47.186 174.337 75.627 1.00 49.29 P
ATOM 3 OP1 U B1394 45.747 174.460 75.287 1.00 49.04 O
ATOM 4 OP2 U B1394 47.948 173.134 75.217 1.00 49.86 O
ATOM 5 O5' U B1394 47.996 175.611 75.140 1.00 46.85 O
ATOM 6 C5' U B1394 47.751 176.230 73.882 1.00 44.92 C
ATOM 7 C4' U B1394 48.181 177.664 73.962 1.00 44.26 C
ATOM 8 O4' U B1394 47.349 178.362 74.941 1.00 44.63 O
ATOM 9 C3' U B1394 49.614 177.817 74.447 1.00 42.77 C
ATOM 10 O3' U B1394 50.210 178.938 73.837 1.00 41.17 O
ATOM 11 C2' U B1394 49.449 178.038 75.943 1.00 43.60 C
ATOM 12 O2' U B1394 50.570 178.705 76.481 1.00 44.47 O
ATOM 13 C1' U B1394 48.161 178.867 75.991 1.00 43.19 C
ATOM 14 N1 U B1394 47.405 178.754 77.254 1.00 42.00 N
ATOM 15 C2 U B1394 46.886 179.914 77.815 1.00 43.06 C
ATOM 16 O2 U B1394 47.023 181.029 77.308 1.00 45.21 O
ATOM 17 N3 U B1394 46.200 179.725 78.993 1.00 41.88 N
ATOM 18 C4 U B1394 45.980 178.537 79.650 1.00 40.53 C
ATOM 19 O4 U B1394 45.415 178.548 80.741 1.00 43.63 O
ATOM 20 C5 U B1394 46.533 177.396 79.010 1.00 41.28 C
ATOM 21 C6 U B1394 47.213 177.535 77.868 1.00 41.55 C
ATOM 22 P C B1395 51.261 178.707 72.666 1.00 42.86 P
ATOM 23 OP1 C B1395 51.828 180.013 72.277 1.00 43.69 O
ATOM 24 OP2 C B1395 50.599 177.854 71.643 1.00 43.72 O
ATOM 25 O5' C B1395 52.419 177.908 73.397 1.00 42.13 O
TER
Atoms:
OP1: (42.855,179.379,86.467)
OP2: (42.790,181.205,84.688)
C3': (46.840,178.518,85.870)
C1': (48.036,178.857,83.886)
C5': (44.714,177.872,84.531)
O4': (46.941,178.044,83.556)
C8: (48.008,181.000,82.475)
O2': (48.748,179.979,85.863)
C6: (49.821,180.194,79.583)
C5: (49.120,180.365,80.781)
C4: (49.064,179.280,81.631)
P: (42.958,179.784,85.051)
C4': (46.204,177.710,84.755)
C2': (47.604,179.603,85.137)
C2: (50.245,178.031,80.267)
N1: (50.384,178.989,79.350)
N3: (49.611,178.071,81.428)
N6: (49.964,181.149,78.672)
N7: (48.452,181.448,81.326)
N9: (48.344,179.694,82.725)
O5': (44.353,179.266,84.470)
O3': (47.782,177.705,86.491)
OP2: (42.790,181.205,84.688)
C3': (46.840,178.518,85.870)
C1': (48.036,178.857,83.886)
C5': (44.714,177.872,84.531)
O4': (46.941,178.044,83.556)
C8: (48.008,181.000,82.475)
O2': (48.748,179.979,85.863)
C6: (49.821,180.194,79.583)
C5: (49.120,180.365,80.781)
C4: (49.064,179.280,81.631)
P: (42.958,179.784,85.051)
C4': (46.204,177.710,84.755)
C2': (47.604,179.603,85.137)
C2: (50.245,178.031,80.267)
N1: (50.384,178.989,79.350)
N3: (49.611,178.071,81.428)
N6: (49.964,181.149,78.672)
N7: (48.452,181.448,81.326)
N9: (48.344,179.694,82.725)
O5': (44.353,179.266,84.470)
O3': (47.782,177.705,86.491)
C4: (45.980,178.537,79.650)
N3: (46.200,179.725,78.993)
OP1: (45.747,174.460,75.287)
OP2: (47.948,173.134,75.217)
C2: (46.886,179.914,77.815)
C1': (48.161,178.867,75.991)
C3': (49.614,177.817,74.447)
O5': (47.996,175.611,75.140)
O4': (47.349,178.362,74.941)
C5': (47.751,176.230,73.882)
P: (47.186,174.337,75.627)
C4': (48.181,177.664,73.962)
C2': (49.449,178.038,75.943)
O2': (50.570,178.705,76.481)
N1: (47.405,178.754,77.254)
O4: (45.415,178.548,80.741)
O2: (47.023,181.029,77.308)
C6: (47.213,177.535,77.868)
C5: (46.533,177.396,79.010)
O3': (50.210,178.938,73.837)
N3: (46.200,179.725,78.993)
OP1: (45.747,174.460,75.287)
OP2: (47.948,173.134,75.217)
C2: (46.886,179.914,77.815)
C1': (48.161,178.867,75.991)
C3': (49.614,177.817,74.447)
O5': (47.996,175.611,75.140)
O4': (47.349,178.362,74.941)
C5': (47.751,176.230,73.882)
P: (47.186,174.337,75.627)
C4': (48.181,177.664,73.962)
C2': (49.449,178.038,75.943)
O2': (50.570,178.705,76.481)
N1: (47.405,178.754,77.254)
O4: (45.415,178.548,80.741)
O2: (47.023,181.029,77.308)
C6: (47.213,177.535,77.868)
C5: (46.533,177.396,79.010)
O3': (50.210,178.938,73.837)
Image (generated by PyMOL):