Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01016:01015
Extra
PDB:
ATOM 1 O3' U A1015 62.613 91.683 115.799 1.00 41.19 O
ATOM 2 P A A1016 61.706 91.441 114.502 1.00 40.04 P
ATOM 3 OP1 A A1016 60.720 90.383 114.825 1.00 41.04 O
ATOM 4 OP2 A A1016 62.647 91.258 113.380 1.00 40.96 O
ATOM 5 O5' A A1016 60.913 92.803 114.267 1.00 39.46 O
ATOM 6 C5' A A1016 59.897 93.227 115.193 1.00 40.08 C
ATOM 7 C4' A A1016 59.655 94.716 115.080 1.00 39.29 C
ATOM 8 O4' A A1016 60.928 95.400 115.057 1.00 40.34 O
ATOM 9 C3' A A1016 58.921 95.214 113.846 1.00 38.27 C
ATOM 10 O3' A A1016 57.518 95.144 114.110 1.00 40.71 O
ATOM 11 C2' A A1016 59.395 96.659 113.765 1.00 38.19 C
ATOM 12 O2' A A1016 58.760 97.464 114.735 1.00 35.91 O
ATOM 13 C1' A A1016 60.854 96.524 114.204 1.00 38.73 C
ATOM 14 N9 A A1016 61.833 96.331 113.134 1.00 37.37 N
ATOM 15 C8 A A1016 62.252 95.139 112.595 1.00 36.63 C
ATOM 16 N7 A A1016 63.179 95.271 111.681 1.00 35.91 N
ATOM 17 C5 A A1016 63.380 96.640 111.606 1.00 34.80 C
ATOM 18 C6 A A1016 64.241 97.424 110.826 1.00 33.69 C
ATOM 19 N6 A A1016 65.107 96.920 109.941 1.00 32.71 N
ATOM 20 N1 A A1016 64.187 98.759 110.987 1.00 33.18 N
ATOM 21 C2 A A1016 63.329 99.260 111.876 1.00 35.09 C
ATOM 22 N3 A A1016 62.474 98.628 112.673 1.00 35.17 N
ATOM 23 C4 A A1016 62.548 97.305 112.486 1.00 35.51 C
ATOM 24 P A A1017 56.469 94.884 112.918 1.00 40.26 P
ATOM 25 OP1 A A1017 55.137 94.741 113.558 1.00 37.86 O
ATOM 26 OP2 A A1017 56.972 93.802 112.027 1.00 38.42 O
ATOM 27 O5' A A1017 56.485 96.254 112.108 1.00 39.86 O
TER
ATOM 1 O3' G B1014 66.908 91.741 111.972 1.00 41.24 O
ATOM 2 P U B1015 67.197 91.102 113.423 1.00 40.62 P
ATOM 3 OP1 U B1015 68.581 91.430 113.806 1.00 41.67 O
ATOM 4 OP2 U B1015 66.782 89.681 113.376 1.00 40.58 O
ATOM 5 O5' U B1015 66.205 91.864 114.410 1.00 39.84 O
ATOM 6 C5' U B1015 65.829 91.257 115.663 1.00 42.78 C
ATOM 7 C4' U B1015 64.913 92.164 116.453 1.00 44.20 C
ATOM 8 O4' U B1015 65.610 93.385 116.811 1.00 46.06 O
ATOM 9 C3' U B1015 63.653 92.646 115.755 1.00 43.75 C
ATOM 10 O3' U B1015 62.613 91.683 115.799 1.00 41.19 O
ATOM 11 C2' U B1015 63.301 93.878 116.574 1.00 44.73 C
ATOM 12 O2' U B1015 62.730 93.522 117.818 1.00 42.28 O
ATOM 13 C1' U B1015 64.692 94.473 116.817 1.00 47.05 C
ATOM 14 N1 U B1015 65.111 95.455 115.796 1.00 48.49 N
ATOM 15 C2 U B1015 64.437 96.668 115.737 1.00 48.87 C
ATOM 16 O2 U B1015 63.498 96.948 116.460 1.00 50.09 O
ATOM 17 N3 U B1015 64.904 97.543 114.791 1.00 50.17 N
ATOM 18 C4 U B1015 65.942 97.344 113.909 1.00 50.07 C
ATOM 19 O4 U B1015 66.257 98.249 113.136 1.00 50.02 O
ATOM 20 C5 U B1015 66.575 96.067 114.012 1.00 50.09 C
ATOM 21 C6 U B1015 66.151 95.189 114.924 1.00 49.53 C
ATOM 22 P A B1016 61.706 91.441 114.502 1.00 40.04 P
ATOM 23 OP1 A B1016 60.720 90.383 114.825 1.00 41.04 O
ATOM 24 OP2 A B1016 62.647 91.258 113.380 1.00 40.96 O
ATOM 25 O5' A B1016 60.913 92.803 114.267 1.00 39.46 O
TER
ATOM 2 P A A1016 61.706 91.441 114.502 1.00 40.04 P
ATOM 3 OP1 A A1016 60.720 90.383 114.825 1.00 41.04 O
ATOM 4 OP2 A A1016 62.647 91.258 113.380 1.00 40.96 O
ATOM 5 O5' A A1016 60.913 92.803 114.267 1.00 39.46 O
ATOM 6 C5' A A1016 59.897 93.227 115.193 1.00 40.08 C
ATOM 7 C4' A A1016 59.655 94.716 115.080 1.00 39.29 C
ATOM 8 O4' A A1016 60.928 95.400 115.057 1.00 40.34 O
ATOM 9 C3' A A1016 58.921 95.214 113.846 1.00 38.27 C
ATOM 10 O3' A A1016 57.518 95.144 114.110 1.00 40.71 O
ATOM 11 C2' A A1016 59.395 96.659 113.765 1.00 38.19 C
ATOM 12 O2' A A1016 58.760 97.464 114.735 1.00 35.91 O
ATOM 13 C1' A A1016 60.854 96.524 114.204 1.00 38.73 C
ATOM 14 N9 A A1016 61.833 96.331 113.134 1.00 37.37 N
ATOM 15 C8 A A1016 62.252 95.139 112.595 1.00 36.63 C
ATOM 16 N7 A A1016 63.179 95.271 111.681 1.00 35.91 N
ATOM 17 C5 A A1016 63.380 96.640 111.606 1.00 34.80 C
ATOM 18 C6 A A1016 64.241 97.424 110.826 1.00 33.69 C
ATOM 19 N6 A A1016 65.107 96.920 109.941 1.00 32.71 N
ATOM 20 N1 A A1016 64.187 98.759 110.987 1.00 33.18 N
ATOM 21 C2 A A1016 63.329 99.260 111.876 1.00 35.09 C
ATOM 22 N3 A A1016 62.474 98.628 112.673 1.00 35.17 N
ATOM 23 C4 A A1016 62.548 97.305 112.486 1.00 35.51 C
ATOM 24 P A A1017 56.469 94.884 112.918 1.00 40.26 P
ATOM 25 OP1 A A1017 55.137 94.741 113.558 1.00 37.86 O
ATOM 26 OP2 A A1017 56.972 93.802 112.027 1.00 38.42 O
ATOM 27 O5' A A1017 56.485 96.254 112.108 1.00 39.86 O
TER
ATOM 1 O3' G B1014 66.908 91.741 111.972 1.00 41.24 O
ATOM 2 P U B1015 67.197 91.102 113.423 1.00 40.62 P
ATOM 3 OP1 U B1015 68.581 91.430 113.806 1.00 41.67 O
ATOM 4 OP2 U B1015 66.782 89.681 113.376 1.00 40.58 O
ATOM 5 O5' U B1015 66.205 91.864 114.410 1.00 39.84 O
ATOM 6 C5' U B1015 65.829 91.257 115.663 1.00 42.78 C
ATOM 7 C4' U B1015 64.913 92.164 116.453 1.00 44.20 C
ATOM 8 O4' U B1015 65.610 93.385 116.811 1.00 46.06 O
ATOM 9 C3' U B1015 63.653 92.646 115.755 1.00 43.75 C
ATOM 10 O3' U B1015 62.613 91.683 115.799 1.00 41.19 O
ATOM 11 C2' U B1015 63.301 93.878 116.574 1.00 44.73 C
ATOM 12 O2' U B1015 62.730 93.522 117.818 1.00 42.28 O
ATOM 13 C1' U B1015 64.692 94.473 116.817 1.00 47.05 C
ATOM 14 N1 U B1015 65.111 95.455 115.796 1.00 48.49 N
ATOM 15 C2 U B1015 64.437 96.668 115.737 1.00 48.87 C
ATOM 16 O2 U B1015 63.498 96.948 116.460 1.00 50.09 O
ATOM 17 N3 U B1015 64.904 97.543 114.791 1.00 50.17 N
ATOM 18 C4 U B1015 65.942 97.344 113.909 1.00 50.07 C
ATOM 19 O4 U B1015 66.257 98.249 113.136 1.00 50.02 O
ATOM 20 C5 U B1015 66.575 96.067 114.012 1.00 50.09 C
ATOM 21 C6 U B1015 66.151 95.189 114.924 1.00 49.53 C
ATOM 22 P A B1016 61.706 91.441 114.502 1.00 40.04 P
ATOM 23 OP1 A B1016 60.720 90.383 114.825 1.00 41.04 O
ATOM 24 OP2 A B1016 62.647 91.258 113.380 1.00 40.96 O
ATOM 25 O5' A B1016 60.913 92.803 114.267 1.00 39.46 O
TER
Atoms:
OP1: (60.720,90.383,114.825)
OP2: (62.647,91.258,113.380)
C3': (58.921,95.214,113.846)
C1': (60.854,96.524,114.204)
C5': (59.897,93.227,115.193)
O4': (60.928,95.400,115.057)
C8: (62.252,95.139,112.595)
O2': (58.760,97.464,114.735)
C6: (64.241,97.424,110.826)
C5: (63.380,96.640,111.606)
C4: (62.548,97.305,112.486)
P: (61.706,91.441,114.502)
C4': (59.655,94.716,115.080)
C2': (59.395,96.659,113.765)
C2: (63.329,99.260,111.876)
N1: (64.187,98.759,110.987)
N3: (62.474,98.628,112.673)
N6: (65.107,96.920,109.941)
N7: (63.179,95.271,111.681)
N9: (61.833,96.331,113.134)
O5': (60.913,92.803,114.267)
O3': (57.518,95.144,114.110)
OP2: (62.647,91.258,113.380)
C3': (58.921,95.214,113.846)
C1': (60.854,96.524,114.204)
C5': (59.897,93.227,115.193)
O4': (60.928,95.400,115.057)
C8: (62.252,95.139,112.595)
O2': (58.760,97.464,114.735)
C6: (64.241,97.424,110.826)
C5: (63.380,96.640,111.606)
C4: (62.548,97.305,112.486)
P: (61.706,91.441,114.502)
C4': (59.655,94.716,115.080)
C2': (59.395,96.659,113.765)
C2: (63.329,99.260,111.876)
N1: (64.187,98.759,110.987)
N3: (62.474,98.628,112.673)
N6: (65.107,96.920,109.941)
N7: (63.179,95.271,111.681)
N9: (61.833,96.331,113.134)
O5': (60.913,92.803,114.267)
O3': (57.518,95.144,114.110)
C4: (65.942,97.344,113.909)
N3: (64.904,97.543,114.791)
OP1: (68.581,91.430,113.806)
OP2: (66.782,89.681,113.376)
C2: (64.437,96.668,115.737)
C1': (64.692,94.473,116.817)
C3': (63.653,92.646,115.755)
O5': (66.205,91.864,114.410)
O4': (65.610,93.385,116.811)
C5': (65.829,91.257,115.663)
P: (67.197,91.102,113.423)
C4': (64.913,92.164,116.453)
C2': (63.301,93.878,116.574)
O2': (62.730,93.522,117.818)
N1: (65.111,95.455,115.796)
O4: (66.257,98.249,113.136)
O2: (63.498,96.948,116.460)
C6: (66.151,95.189,114.924)
C5: (66.575,96.067,114.012)
O3': (62.613,91.683,115.799)
N3: (64.904,97.543,114.791)
OP1: (68.581,91.430,113.806)
OP2: (66.782,89.681,113.376)
C2: (64.437,96.668,115.737)
C1': (64.692,94.473,116.817)
C3': (63.653,92.646,115.755)
O5': (66.205,91.864,114.410)
O4': (65.610,93.385,116.811)
C5': (65.829,91.257,115.663)
P: (67.197,91.102,113.423)
C4': (64.913,92.164,116.453)
C2': (63.301,93.878,116.574)
O2': (62.730,93.522,117.818)
N1: (65.111,95.455,115.796)
O4: (66.257,98.249,113.136)
O2: (63.498,96.948,116.460)
C6: (66.151,95.189,114.924)
C5: (66.575,96.067,114.012)
O3': (62.613,91.683,115.799)
Image (generated by PyMOL):