ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUT:R53:R52

Extra

PDB:
ATOM 1 O3' U A 52 -3.141 2.969 -21.064 1.00 61.21 O
ATOM 2 P A A 53 -2.886 4.057 -22.203 1.00 65.23 P
ATOM 3 OP1 A A 53 -1.415 4.149 -22.378 1.00 64.81 O
ATOM 4 OP2 A A 53 -3.684 5.262 -21.871 1.00 65.89 O
ATOM 5 O5' A A 53 -3.540 3.423 -23.516 1.00 68.27 O
ATOM 6 C5' A A 53 -2.830 2.460 -24.268 1.00 71.06 C
ATOM 7 C4' A A 53 -3.640 1.188 -24.352 1.00 74.74 C
ATOM 8 O4' A A 53 -4.805 1.307 -23.513 1.00 76.54 O
ATOM 9 C3' A A 53 -4.201 0.902 -25.730 1.00 79.77 C
ATOM 10 O3' A A 53 -3.328 -0.001 -26.374 1.00 82.24 O
ATOM 11 C2' A A 53 -5.576 0.280 -25.469 1.00 81.73 C
ATOM 12 O2' A A 53 -5.650 -1.075 -25.859 1.00 83.26 O
ATOM 13 C1' A A 53 -5.754 0.365 -23.956 1.00 80.38 C
ATOM 14 N9 A A 53 -7.098 0.779 -23.536 1.00 84.05 N
ATOM 15 C8 A A 53 -7.480 1.995 -23.027 1.00 84.57 C
ATOM 16 N7 A A 53 -8.759 2.083 -22.737 1.00 85.60 N
ATOM 17 C5 A A 53 -9.258 0.837 -23.080 1.00 86.25 C
ATOM 18 C6 A A 53 -10.554 0.276 -23.017 1.00 86.58 C
ATOM 19 N6 A A 53 -11.622 0.937 -22.565 1.00 86.89 N
ATOM 20 N1 A A 53 -10.711 -0.999 -23.437 1.00 87.51 N
ATOM 21 C2 A A 53 -9.645 -1.672 -23.894 1.00 87.50 C
ATOM 22 N3 A A 53 -8.382 -1.255 -24.000 1.00 86.60 N
ATOM 23 C4 A A 53 -8.251 0.018 -23.573 1.00 86.02 C
ATOM 24 P A A 54 -2.211 0.540 -27.380 1.00 84.09 P
ATOM 25 OP1 A A 54 -1.107 1.110 -26.570 1.00 81.42 O
ATOM 26 OP2 A A 54 -2.888 1.370 -28.406 1.00 86.42 O
ATOM 27 O5' A A 54 -1.721 -0.815 -28.080 1.00 81.67 O
TER

ATOM 1 O3' C B 51 -6.022 6.566 -16.870 1.00 62.58 O
ATOM 2 P U B 52 -6.083 6.604 -18.474 1.00 63.90 P
ATOM 3 OP1 U B 52 -5.061 7.572 -18.928 1.00 64.63 O
ATOM 4 OP2 U B 52 -7.492 6.783 -18.893 1.00 65.56 O
ATOM 5 O5' U B 52 -5.624 5.134 -18.900 1.00 60.92 O
ATOM 6 C5' U B 52 -4.312 4.681 -18.600 1.00 57.19 C
ATOM 7 C4' U B 52 -4.195 3.212 -18.928 1.00 55.94 C
ATOM 8 O4' U B 52 -5.263 2.494 -18.276 1.00 55.15 O
ATOM 9 C3' U B 52 -4.387 2.922 -20.400 1.00 59.08 C
ATOM 10 O3' U B 52 -3.141 2.969 -21.064 1.00 61.21 O
ATOM 11 C2' U B 52 -4.963 1.518 -20.413 1.00 59.24 C
ATOM 12 O2' U B 52 -3.977 0.533 -20.627 1.00 60.43 O
ATOM 13 C1' U B 52 -5.580 1.344 -19.032 1.00 56.68 C
ATOM 14 N1 U B 52 -7.062 1.159 -19.103 1.00 58.29 N
ATOM 15 C2 U B 52 -7.587 0.028 -19.705 1.00 59.34 C
ATOM 16 O2 U B 52 -6.923 -0.862 -20.200 1.00 60.65 O
ATOM 17 N3 U B 52 -8.954 -0.040 -19.712 1.00 61.02 N
ATOM 18 C4 U B 52 -9.839 0.881 -19.197 1.00 61.84 C
ATOM 19 O4 U B 52 -11.039 0.666 -19.289 1.00 64.38 O
ATOM 20 C5 U B 52 -9.228 2.036 -18.593 1.00 61.10 C
ATOM 21 C6 U B 52 -7.891 2.127 -18.566 1.00 59.74 C
ATOM 22 P A B 53 -2.886 4.057 -22.203 1.00 65.23 P
ATOM 23 OP1 A B 53 -1.415 4.149 -22.378 1.00 64.81 O
ATOM 24 OP2 A B 53 -3.684 5.262 -21.871 1.00 65.89 O
ATOM 25 O5' A B 53 -3.540 3.423 -23.516 1.00 68.27 O
TER

Atoms:
OP1: (-1.415,4.149,-22.378)
OP2: (-3.684,5.262,-21.871)
C3': (-4.201,0.902,-25.730)
C1': (-5.754,0.365,-23.956)
C5': (-2.830,2.460,-24.268)
O4': (-4.805,1.307,-23.513)
C8: (-7.480,1.995,-23.027)
O2': (-5.650,-1.075,-25.859)
C6: (-10.554,0.276,-23.017)
C5: (-9.258,0.837,-23.080)
C4: (-8.251,0.018,-23.573)
P: (-2.886,4.057,-22.203)
C4': (-3.640,1.188,-24.352)
C2': (-5.576,0.280,-25.469)
C2: (-9.645,-1.672,-23.894)
N1: (-10.711,-0.999,-23.437)
N3: (-8.382,-1.255,-24.000)
N6: (-11.622,0.937,-22.565)
N7: (-8.759,2.083,-22.737)
N9: (-7.098,0.779,-23.536)
O5': (-3.540,3.423,-23.516)
O3': (-3.328,-0.001,-26.374)
C4: (-9.839,0.881,-19.197)
N3: (-8.954,-0.040,-19.712)
OP1: (-5.061,7.572,-18.928)
OP2: (-7.492,6.783,-18.893)
C2: (-7.587,0.028,-19.705)
C1': (-5.580,1.344,-19.032)
C3': (-4.387,2.922,-20.400)
O5': (-5.624,5.134,-18.900)
O4': (-5.263,2.494,-18.276)
C5': (-4.312,4.681,-18.600)
P: (-6.083,6.604,-18.474)
C4': (-4.195,3.212,-18.928)
C2': (-4.963,1.518,-20.413)
O2': (-3.977,0.533,-20.627)
N1: (-7.062,1.159,-19.103)
O4: (-11.039,0.666,-19.289)
O2: (-6.923,-0.862,-20.200)
C6: (-7.891,2.127,-18.566)
C5: (-9.228,2.036,-18.593)
O3': (-3.141,2.969,-21.064)
Image (generated by PyMOL):
PyMOL image
show in jmol