Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MHK:L5:S7
Extra
PDB:
ATOM 1 O3' C A 4 1.006 5.499 18.456 1.00 65.50 O
ATOM 2 P C A 5 1.841 4.886 17.225 1.00 64.63 P
ATOM 3 OP1 C A 5 2.651 6.017 16.701 1.00 63.23 O
ATOM 4 OP2 C A 5 0.921 4.148 16.320 1.00 64.57 O
ATOM 5 O5' C A 5 2.826 3.828 17.896 1.00 64.10 O
ATOM 6 C5' C A 5 3.833 4.256 18.808 1.00 64.53 C
ATOM 7 C4' C A 5 4.450 3.073 19.511 1.00 64.33 C
ATOM 8 O4' C A 5 3.410 2.331 20.194 1.00 63.59 O
ATOM 9 C3' C A 5 5.118 2.030 18.628 1.00 64.71 C
ATOM 10 O3' C A 5 6.445 2.435 18.298 1.00 65.16 O
ATOM 11 C2' C A 5 5.107 0.798 19.526 1.00 63.87 C
ATOM 12 O2' C A 5 6.149 0.801 20.475 1.00 66.01 O
ATOM 13 C1' C A 5 3.770 0.961 20.254 1.00 63.53 C
ATOM 14 N1 C A 5 2.697 0.168 19.646 1.00 63.59 N
ATOM 15 C2 C A 5 2.656 -1.195 19.915 1.00 63.88 C
ATOM 16 O2 C A 5 3.514 -1.676 20.673 1.00 62.62 O
ATOM 17 N3 C A 5 1.689 -1.954 19.343 1.00 64.29 N
ATOM 18 C4 C A 5 0.792 -1.389 18.531 1.00 64.15 C
ATOM 19 N4 C A 5 -0.132 -2.179 17.969 1.00 64.80 N
ATOM 20 C5 C A 5 0.805 0.009 18.252 1.00 62.63 C
ATOM 21 C6 C A 5 1.765 0.743 18.825 1.00 62.92 C
ATOM 22 P U A 6 7.288 1.605 17.210 1.00 65.76 P
ATOM 23 OP1 U A 6 8.426 2.460 16.792 1.00 65.79 O
ATOM 24 OP2 U A 6 6.355 1.071 16.184 1.00 65.93 O
ATOM 25 O5' U A 6 7.872 0.374 18.039 1.00 65.82 O
TER
ATOM 1 O3' G B 6 -0.558 -6.889 16.408 1.00 57.99 O
ATOM 2 P A B 7 -0.817 -6.677 17.990 1.00 61.97 P
ATOM 3 OP1 A B 7 -2.239 -7.033 18.255 1.00 60.30 O
ATOM 4 OP2 A B 7 -0.303 -5.343 18.420 1.00 59.67 O
ATOM 5 O5' A B 7 0.090 -7.809 18.655 1.00 63.95 O
ATOM 6 C5' A B 7 -0.327 -9.178 18.670 1.00 67.91 C
ATOM 7 C4' A B 7 0.199 -9.898 17.449 1.00 70.87 C
ATOM 8 O4' A B 7 1.382 -9.221 16.975 1.00 72.44 O
ATOM 9 C3' A B 7 0.581 -11.355 17.669 1.00 72.76 C
ATOM 10 O3' A B 7 -0.561 -12.223 17.505 1.00 74.56 O
ATOM 11 C2' A B 7 1.790 -11.579 16.759 1.00 73.03 C
ATOM 12 O2' A B 7 1.472 -12.078 15.481 1.00 73.99 O
ATOM 13 C1' A B 7 2.367 -10.163 16.619 1.00 73.17 C
ATOM 14 N9 A B 7 3.596 -9.804 17.328 1.00 73.97 N
ATOM 15 C8 A B 7 3.901 -8.534 17.763 1.00 74.19 C
ATOM 16 N7 A B 7 5.084 -8.426 18.312 1.00 73.90 N
ATOM 17 C5 A B 7 5.595 -9.714 18.255 1.00 74.59 C
ATOM 18 C6 A B 7 6.823 -10.255 18.666 1.00 73.78 C
ATOM 19 N6 A B 7 7.793 -9.529 19.228 1.00 73.41 N
ATOM 20 N1 A B 7 7.025 -11.578 18.471 1.00 73.72 N
ATOM 21 C2 A B 7 6.048 -12.299 17.894 1.00 74.89 C
ATOM 22 N3 A B 7 4.847 -11.903 17.456 1.00 75.37 N
ATOM 23 C4 A B 7 4.681 -10.582 17.666 1.00 75.28 C
ATOM 24 P A B 8 -0.996 -12.774 16.040 1.00 74.93 P
ATOM 25 OP1 A B 8 -2.398 -13.248 16.162 1.00 74.74 O
ATOM 26 OP2 A B 8 0.025 -13.676 15.452 1.00 74.99 O
ATOM 27 O5' A B 8 -1.057 -11.473 15.134 1.00 75.02 O
TER
ATOM 2 P C A 5 1.841 4.886 17.225 1.00 64.63 P
ATOM 3 OP1 C A 5 2.651 6.017 16.701 1.00 63.23 O
ATOM 4 OP2 C A 5 0.921 4.148 16.320 1.00 64.57 O
ATOM 5 O5' C A 5 2.826 3.828 17.896 1.00 64.10 O
ATOM 6 C5' C A 5 3.833 4.256 18.808 1.00 64.53 C
ATOM 7 C4' C A 5 4.450 3.073 19.511 1.00 64.33 C
ATOM 8 O4' C A 5 3.410 2.331 20.194 1.00 63.59 O
ATOM 9 C3' C A 5 5.118 2.030 18.628 1.00 64.71 C
ATOM 10 O3' C A 5 6.445 2.435 18.298 1.00 65.16 O
ATOM 11 C2' C A 5 5.107 0.798 19.526 1.00 63.87 C
ATOM 12 O2' C A 5 6.149 0.801 20.475 1.00 66.01 O
ATOM 13 C1' C A 5 3.770 0.961 20.254 1.00 63.53 C
ATOM 14 N1 C A 5 2.697 0.168 19.646 1.00 63.59 N
ATOM 15 C2 C A 5 2.656 -1.195 19.915 1.00 63.88 C
ATOM 16 O2 C A 5 3.514 -1.676 20.673 1.00 62.62 O
ATOM 17 N3 C A 5 1.689 -1.954 19.343 1.00 64.29 N
ATOM 18 C4 C A 5 0.792 -1.389 18.531 1.00 64.15 C
ATOM 19 N4 C A 5 -0.132 -2.179 17.969 1.00 64.80 N
ATOM 20 C5 C A 5 0.805 0.009 18.252 1.00 62.63 C
ATOM 21 C6 C A 5 1.765 0.743 18.825 1.00 62.92 C
ATOM 22 P U A 6 7.288 1.605 17.210 1.00 65.76 P
ATOM 23 OP1 U A 6 8.426 2.460 16.792 1.00 65.79 O
ATOM 24 OP2 U A 6 6.355 1.071 16.184 1.00 65.93 O
ATOM 25 O5' U A 6 7.872 0.374 18.039 1.00 65.82 O
TER
ATOM 1 O3' G B 6 -0.558 -6.889 16.408 1.00 57.99 O
ATOM 2 P A B 7 -0.817 -6.677 17.990 1.00 61.97 P
ATOM 3 OP1 A B 7 -2.239 -7.033 18.255 1.00 60.30 O
ATOM 4 OP2 A B 7 -0.303 -5.343 18.420 1.00 59.67 O
ATOM 5 O5' A B 7 0.090 -7.809 18.655 1.00 63.95 O
ATOM 6 C5' A B 7 -0.327 -9.178 18.670 1.00 67.91 C
ATOM 7 C4' A B 7 0.199 -9.898 17.449 1.00 70.87 C
ATOM 8 O4' A B 7 1.382 -9.221 16.975 1.00 72.44 O
ATOM 9 C3' A B 7 0.581 -11.355 17.669 1.00 72.76 C
ATOM 10 O3' A B 7 -0.561 -12.223 17.505 1.00 74.56 O
ATOM 11 C2' A B 7 1.790 -11.579 16.759 1.00 73.03 C
ATOM 12 O2' A B 7 1.472 -12.078 15.481 1.00 73.99 O
ATOM 13 C1' A B 7 2.367 -10.163 16.619 1.00 73.17 C
ATOM 14 N9 A B 7 3.596 -9.804 17.328 1.00 73.97 N
ATOM 15 C8 A B 7 3.901 -8.534 17.763 1.00 74.19 C
ATOM 16 N7 A B 7 5.084 -8.426 18.312 1.00 73.90 N
ATOM 17 C5 A B 7 5.595 -9.714 18.255 1.00 74.59 C
ATOM 18 C6 A B 7 6.823 -10.255 18.666 1.00 73.78 C
ATOM 19 N6 A B 7 7.793 -9.529 19.228 1.00 73.41 N
ATOM 20 N1 A B 7 7.025 -11.578 18.471 1.00 73.72 N
ATOM 21 C2 A B 7 6.048 -12.299 17.894 1.00 74.89 C
ATOM 22 N3 A B 7 4.847 -11.903 17.456 1.00 75.37 N
ATOM 23 C4 A B 7 4.681 -10.582 17.666 1.00 75.28 C
ATOM 24 P A B 8 -0.996 -12.774 16.040 1.00 74.93 P
ATOM 25 OP1 A B 8 -2.398 -13.248 16.162 1.00 74.74 O
ATOM 26 OP2 A B 8 0.025 -13.676 15.452 1.00 74.99 O
ATOM 27 O5' A B 8 -1.057 -11.473 15.134 1.00 75.02 O
TER
Atoms:
C2: (2.656,-1.195,19.915)
OP1: (2.651,6.017,16.701)
OP2: (0.921,4.148,16.320)
C4: (0.792,-1.389,18.531)
O5': (2.826,3.828,17.896)
C3': (5.118,2.030,18.628)
C1': (3.770,0.961,20.254)
O4': (3.410,2.331,20.194)
C5': (3.833,4.256,18.808)
P: (1.841,4.886,17.225)
O2: (3.514,-1.676,20.673)
C4': (4.450,3.073,19.511)
C2': (5.107,0.798,19.526)
O2': (6.149,0.801,20.475)
N1: (2.697,0.168,19.646)
N3: (1.689,-1.954,19.343)
N4: (-0.132,-2.179,17.969)
C6: (1.765,0.743,18.825)
C5: (0.805,0.009,18.252)
O3': (6.445,2.435,18.298)
OP1: (2.651,6.017,16.701)
OP2: (0.921,4.148,16.320)
C4: (0.792,-1.389,18.531)
O5': (2.826,3.828,17.896)
C3': (5.118,2.030,18.628)
C1': (3.770,0.961,20.254)
O4': (3.410,2.331,20.194)
C5': (3.833,4.256,18.808)
P: (1.841,4.886,17.225)
O2: (3.514,-1.676,20.673)
C4': (4.450,3.073,19.511)
C2': (5.107,0.798,19.526)
O2': (6.149,0.801,20.475)
N1: (2.697,0.168,19.646)
N3: (1.689,-1.954,19.343)
N4: (-0.132,-2.179,17.969)
C6: (1.765,0.743,18.825)
C5: (0.805,0.009,18.252)
O3': (6.445,2.435,18.298)
OP1: (-2.239,-7.033,18.255)
OP2: (-0.303,-5.343,18.420)
C3': (0.581,-11.355,17.669)
C1': (2.367,-10.163,16.619)
C5': (-0.327,-9.178,18.670)
O4': (1.382,-9.221,16.975)
C8: (3.901,-8.534,17.763)
O2': (1.472,-12.078,15.481)
C6: (6.823,-10.255,18.666)
C5: (5.595,-9.714,18.255)
C4: (4.681,-10.582,17.666)
P: (-0.817,-6.677,17.990)
C4': (0.199,-9.898,17.449)
C2': (1.790,-11.579,16.759)
C2: (6.048,-12.299,17.894)
N1: (7.025,-11.578,18.471)
N3: (4.847,-11.903,17.456)
N6: (7.793,-9.529,19.228)
N7: (5.084,-8.426,18.312)
N9: (3.596,-9.804,17.328)
O5': (0.090,-7.809,18.655)
O3': (-0.561,-12.223,17.505)
OP2: (-0.303,-5.343,18.420)
C3': (0.581,-11.355,17.669)
C1': (2.367,-10.163,16.619)
C5': (-0.327,-9.178,18.670)
O4': (1.382,-9.221,16.975)
C8: (3.901,-8.534,17.763)
O2': (1.472,-12.078,15.481)
C6: (6.823,-10.255,18.666)
C5: (5.595,-9.714,18.255)
C4: (4.681,-10.582,17.666)
P: (-0.817,-6.677,17.990)
C4': (0.199,-9.898,17.449)
C2': (1.790,-11.579,16.759)
C2: (6.048,-12.299,17.894)
N1: (7.025,-11.578,18.471)
N3: (4.847,-11.903,17.456)
N6: (7.793,-9.529,19.228)
N7: (5.084,-8.426,18.312)
N9: (3.596,-9.804,17.328)
O5': (0.090,-7.809,18.655)
O3': (-0.561,-12.223,17.505)
Image (generated by PyMOL):