ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01964:01729

Extra

PDB:
ATOM 1 O3' U A1963 114.201 138.645 104.387 1.00 60.59 O
ATOM 2 P A A1964 112.862 139.449 104.786 1.00 58.30 P
ATOM 3 OP1 A A1964 112.714 139.415 106.267 1.00 57.01 O
ATOM 4 OP2 A A1964 111.745 138.974 103.933 1.00 60.95 O
ATOM 5 O5' A A1964 113.185 140.947 104.352 1.00 57.38 O
ATOM 6 C5' A A1964 114.252 141.684 104.971 1.00 53.71 C
ATOM 7 C4' A A1964 114.773 142.742 104.033 1.00 51.53 C
ATOM 8 O4' A A1964 115.413 142.121 102.888 1.00 50.99 O
ATOM 9 C3' A A1964 113.726 143.648 103.419 1.00 49.83 C
ATOM 10 O3' A A1964 113.361 144.677 104.316 1.00 49.81 O
ATOM 11 C2' A A1964 114.447 144.171 102.186 1.00 50.00 C
ATOM 12 O2' A A1964 115.393 145.170 102.512 1.00 48.49 O
ATOM 13 C1' A A1964 115.199 142.918 101.733 1.00 50.21 C
ATOM 14 N9 A A1964 114.453 142.113 100.769 1.00 51.65 N
ATOM 15 C8 A A1964 113.709 140.984 101.022 1.00 52.91 C
ATOM 16 N7 A A1964 113.160 140.462 99.956 1.00 53.34 N
ATOM 17 C5 A A1964 113.563 141.304 98.930 1.00 53.17 C
ATOM 18 C6 A A1964 113.317 141.290 97.547 1.00 54.12 C
ATOM 19 N6 A A1964 112.571 140.361 96.939 1.00 54.12 N
ATOM 20 N1 A A1964 113.870 142.272 96.800 1.00 53.53 N
ATOM 21 C2 A A1964 114.615 143.200 97.413 1.00 52.94 C
ATOM 22 N3 A A1964 114.918 143.318 98.706 1.00 53.78 N
ATOM 23 C4 A A1964 114.356 142.328 99.417 1.00 52.36 C
ATOM 24 P A A1965 111.898 145.323 104.224 1.00 52.26 P
ATOM 25 OP1 A A1965 111.898 146.573 105.032 1.00 52.91 O
ATOM 26 OP2 A A1965 110.911 144.258 104.537 1.00 52.57 O
ATOM 27 O5' A A1965 111.760 145.714 102.683 1.00 50.21 O
TER

ATOM 1 O3' U B1728 120.295 141.849 102.973 1.00 52.98 O
ATOM 2 P U B1729 121.780 141.853 102.364 1.00 53.84 P
ATOM 3 OP1 U B1729 122.112 140.468 101.933 1.00 51.94 O
ATOM 4 OP2 U B1729 122.673 142.559 103.311 1.00 55.99 O
ATOM 5 O5' U B1729 121.668 142.746 101.056 1.00 52.06 O
ATOM 6 C5' U B1729 122.723 142.737 100.100 1.00 53.72 C
ATOM 7 C4' U B1729 122.213 143.165 98.752 1.00 56.52 C
ATOM 8 O4' U B1729 121.229 142.207 98.272 1.00 57.05 O
ATOM 9 C3' U B1729 121.553 144.537 98.686 1.00 57.88 C
ATOM 10 O3' U B1729 121.908 145.140 97.449 1.00 59.19 O
ATOM 11 C2' U B1729 120.062 144.196 98.713 1.00 57.48 C
ATOM 12 O2' U B1729 119.256 145.146 98.050 1.00 57.06 O
ATOM 13 C1' U B1729 120.031 142.881 97.939 1.00 56.23 C
ATOM 14 N1 U B1729 118.901 142.004 98.285 1.00 55.21 N
ATOM 15 C2 U B1729 118.098 141.546 97.254 1.00 54.51 C
ATOM 16 O2 U B1729 118.254 141.880 96.085 1.00 53.69 O
ATOM 17 N3 U B1729 117.100 140.680 97.643 1.00 52.96 N
ATOM 18 C4 U B1729 116.825 140.242 98.924 1.00 52.54 C
ATOM 19 O4 U B1729 115.988 139.355 99.097 1.00 49.60 O
ATOM 20 C5 U B1729 117.672 140.794 99.931 1.00 54.01 C
ATOM 21 C6 U B1729 118.656 141.632 99.588 1.00 54.95 C
ATOM 22 P C B1730 123.333 145.859 97.303 1.00 58.22 P
ATOM 23 OP1 C B1730 123.451 146.297 95.896 1.00 57.34 O
ATOM 24 OP2 C B1730 124.334 144.929 97.866 1.00 58.70 O
ATOM 25 O5' C B1730 123.234 147.143 98.246 1.00 57.77 O
TER

Atoms:
OP1: (112.714,139.415,106.267)
OP2: (111.745,138.974,103.933)
C3': (113.726,143.648,103.419)
C1': (115.199,142.918,101.733)
C5': (114.252,141.684,104.971)
O4': (115.413,142.121,102.888)
C8: (113.709,140.984,101.022)
O2': (115.393,145.170,102.512)
C6: (113.317,141.290,97.547)
C5: (113.563,141.304,98.930)
C4: (114.356,142.328,99.417)
P: (112.862,139.449,104.786)
C4': (114.773,142.742,104.033)
C2': (114.447,144.171,102.186)
C2: (114.615,143.200,97.413)
N1: (113.870,142.272,96.800)
N3: (114.918,143.318,98.706)
N6: (112.571,140.361,96.939)
N7: (113.160,140.462,99.956)
N9: (114.453,142.113,100.769)
O5': (113.185,140.947,104.352)
O3': (113.361,144.677,104.316)
C4: (116.825,140.242,98.924)
N3: (117.100,140.680,97.643)
OP1: (122.112,140.468,101.933)
OP2: (122.673,142.559,103.311)
C2: (118.098,141.546,97.254)
C1': (120.031,142.881,97.939)
C3': (121.553,144.537,98.686)
O5': (121.668,142.746,101.056)
O4': (121.229,142.207,98.272)
C5': (122.723,142.737,100.100)
P: (121.780,141.853,102.364)
C4': (122.213,143.165,98.752)
C2': (120.062,144.196,98.713)
O2': (119.256,145.146,98.050)
N1: (118.901,142.004,98.285)
O4: (115.988,139.355,99.097)
O2: (118.254,141.880,96.085)
C6: (118.656,141.632,99.588)
C5: (117.672,140.794,99.931)
O3': (121.908,145.140,97.449)
Image (generated by PyMOL):
PyMOL image
show in jmol