Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12838:12809
Extra
PDB:
ATOM 1 O3' G A2837 15.794 64.907 65.418 1.00 57.97 O
ATOM 2 P A A2838 15.516 64.241 63.973 1.00 61.72 P
ATOM 3 OP1 A A2838 14.042 64.082 63.816 1.00 61.87 O
ATOM 4 OP2 A A2838 16.381 63.044 63.852 1.00 61.04 O
ATOM 5 O5' A A2838 16.032 65.379 62.997 1.00 62.18 O
ATOM 6 C5' A A2838 17.261 65.267 62.351 1.00 61.96 C
ATOM 7 C4' A A2838 18.249 66.258 62.872 1.00 62.28 C
ATOM 8 O4' A A2838 18.214 66.277 64.319 1.00 62.29 O
ATOM 9 C3' A A2838 19.671 65.905 62.556 1.00 61.92 C
ATOM 10 O3' A A2838 20.020 66.267 61.268 1.00 62.07 O
ATOM 11 C2' A A2838 20.470 66.582 63.655 1.00 62.13 C
ATOM 12 O2' A A2838 20.572 67.977 63.436 1.00 62.80 O
ATOM 13 C1' A A2838 19.544 66.354 64.835 1.00 62.15 C
ATOM 14 N9 A A2838 19.856 65.085 65.534 1.00 61.51 N
ATOM 15 C8 A A2838 18.912 64.169 65.885 1.00 61.21 C
ATOM 16 N7 A A2838 19.405 63.126 66.497 1.00 60.67 N
ATOM 17 C5 A A2838 20.772 63.359 66.556 1.00 60.60 C
ATOM 18 C6 A A2838 21.818 62.588 67.099 1.00 60.13 C
ATOM 19 N6 A A2838 21.631 61.399 67.685 1.00 59.63 N
ATOM 20 N1 A A2838 23.055 63.083 67.023 1.00 60.21 N
ATOM 21 C2 A A2838 23.185 64.268 66.438 1.00 60.73 C
ATOM 22 N3 A A2838 22.286 65.078 65.893 1.00 61.21 N
ATOM 23 C4 A A2838 21.062 64.568 65.977 1.00 61.12 C
ATOM 24 P A A2839 20.064 65.161 60.125 1.00 62.92 P
ATOM 25 OP1 A A2839 19.425 65.752 58.989 1.00 63.32 O
ATOM 26 OP2 A A2839 19.516 63.921 60.657 1.00 62.40 O
ATOM 27 O5' A A2839 21.632 64.988 59.889 1.00 62.64 O
TER
ATOM 1 O3' U B2808 23.247 58.931 72.457 1.00 54.83 O
ATOM 2 P U B2809 22.039 59.259 71.446 1.00 59.25 P
ATOM 3 OP1 U B2809 20.813 59.482 72.259 1.00 59.53 O
ATOM 4 OP2 U B2809 22.036 58.195 70.418 1.00 58.75 O
ATOM 5 O5' U B2809 22.499 60.622 70.797 1.00 59.77 O
ATOM 6 C5' U B2809 23.739 60.713 70.129 1.00 59.65 C
ATOM 7 C4' U B2809 24.493 61.927 70.552 1.00 60.13 C
ATOM 8 O4' U B2809 24.028 63.051 69.781 1.00 60.66 O
ATOM 9 C3' U B2809 24.347 62.297 72.022 1.00 60.38 C
ATOM 10 O3' U B2809 25.631 62.541 72.588 1.00 60.39 O
ATOM 11 C2' U B2809 23.529 63.581 72.003 1.00 61.06 C
ATOM 12 O2' U B2809 23.852 64.502 73.020 1.00 61.51 O
ATOM 13 C1' U B2809 23.804 64.150 70.613 1.00 61.22 C
ATOM 14 N1 U B2809 22.673 64.908 70.047 1.00 61.68 N
ATOM 15 C2 U B2809 21.463 64.231 69.982 1.00 61.50 C
ATOM 16 O2 U B2809 21.285 63.071 70.324 1.00 61.00 O
ATOM 17 N3 U B2809 20.373 64.877 69.504 1.00 61.92 N
ATOM 18 C4 U B2809 20.380 66.125 69.053 1.00 62.50 C
ATOM 19 O4 U B2809 19.293 66.491 68.652 1.00 62.80 O
ATOM 20 C5 U B2809 21.647 66.808 69.135 1.00 62.67 C
ATOM 21 C6 U B2809 22.737 66.194 69.617 1.00 62.27 C
ATOM 22 P U B2810 26.472 61.318 73.208 1.00 58.36 P
ATOM 23 OP1 U B2810 27.736 61.890 73.747 1.00 58.53 O
ATOM 24 OP2 U B2810 26.537 60.262 72.158 1.00 57.82 O
ATOM 25 O5' U B2810 25.565 60.832 74.406 1.00 58.30 O
TER
ATOM 2 P A A2838 15.516 64.241 63.973 1.00 61.72 P
ATOM 3 OP1 A A2838 14.042 64.082 63.816 1.00 61.87 O
ATOM 4 OP2 A A2838 16.381 63.044 63.852 1.00 61.04 O
ATOM 5 O5' A A2838 16.032 65.379 62.997 1.00 62.18 O
ATOM 6 C5' A A2838 17.261 65.267 62.351 1.00 61.96 C
ATOM 7 C4' A A2838 18.249 66.258 62.872 1.00 62.28 C
ATOM 8 O4' A A2838 18.214 66.277 64.319 1.00 62.29 O
ATOM 9 C3' A A2838 19.671 65.905 62.556 1.00 61.92 C
ATOM 10 O3' A A2838 20.020 66.267 61.268 1.00 62.07 O
ATOM 11 C2' A A2838 20.470 66.582 63.655 1.00 62.13 C
ATOM 12 O2' A A2838 20.572 67.977 63.436 1.00 62.80 O
ATOM 13 C1' A A2838 19.544 66.354 64.835 1.00 62.15 C
ATOM 14 N9 A A2838 19.856 65.085 65.534 1.00 61.51 N
ATOM 15 C8 A A2838 18.912 64.169 65.885 1.00 61.21 C
ATOM 16 N7 A A2838 19.405 63.126 66.497 1.00 60.67 N
ATOM 17 C5 A A2838 20.772 63.359 66.556 1.00 60.60 C
ATOM 18 C6 A A2838 21.818 62.588 67.099 1.00 60.13 C
ATOM 19 N6 A A2838 21.631 61.399 67.685 1.00 59.63 N
ATOM 20 N1 A A2838 23.055 63.083 67.023 1.00 60.21 N
ATOM 21 C2 A A2838 23.185 64.268 66.438 1.00 60.73 C
ATOM 22 N3 A A2838 22.286 65.078 65.893 1.00 61.21 N
ATOM 23 C4 A A2838 21.062 64.568 65.977 1.00 61.12 C
ATOM 24 P A A2839 20.064 65.161 60.125 1.00 62.92 P
ATOM 25 OP1 A A2839 19.425 65.752 58.989 1.00 63.32 O
ATOM 26 OP2 A A2839 19.516 63.921 60.657 1.00 62.40 O
ATOM 27 O5' A A2839 21.632 64.988 59.889 1.00 62.64 O
TER
ATOM 1 O3' U B2808 23.247 58.931 72.457 1.00 54.83 O
ATOM 2 P U B2809 22.039 59.259 71.446 1.00 59.25 P
ATOM 3 OP1 U B2809 20.813 59.482 72.259 1.00 59.53 O
ATOM 4 OP2 U B2809 22.036 58.195 70.418 1.00 58.75 O
ATOM 5 O5' U B2809 22.499 60.622 70.797 1.00 59.77 O
ATOM 6 C5' U B2809 23.739 60.713 70.129 1.00 59.65 C
ATOM 7 C4' U B2809 24.493 61.927 70.552 1.00 60.13 C
ATOM 8 O4' U B2809 24.028 63.051 69.781 1.00 60.66 O
ATOM 9 C3' U B2809 24.347 62.297 72.022 1.00 60.38 C
ATOM 10 O3' U B2809 25.631 62.541 72.588 1.00 60.39 O
ATOM 11 C2' U B2809 23.529 63.581 72.003 1.00 61.06 C
ATOM 12 O2' U B2809 23.852 64.502 73.020 1.00 61.51 O
ATOM 13 C1' U B2809 23.804 64.150 70.613 1.00 61.22 C
ATOM 14 N1 U B2809 22.673 64.908 70.047 1.00 61.68 N
ATOM 15 C2 U B2809 21.463 64.231 69.982 1.00 61.50 C
ATOM 16 O2 U B2809 21.285 63.071 70.324 1.00 61.00 O
ATOM 17 N3 U B2809 20.373 64.877 69.504 1.00 61.92 N
ATOM 18 C4 U B2809 20.380 66.125 69.053 1.00 62.50 C
ATOM 19 O4 U B2809 19.293 66.491 68.652 1.00 62.80 O
ATOM 20 C5 U B2809 21.647 66.808 69.135 1.00 62.67 C
ATOM 21 C6 U B2809 22.737 66.194 69.617 1.00 62.27 C
ATOM 22 P U B2810 26.472 61.318 73.208 1.00 58.36 P
ATOM 23 OP1 U B2810 27.736 61.890 73.747 1.00 58.53 O
ATOM 24 OP2 U B2810 26.537 60.262 72.158 1.00 57.82 O
ATOM 25 O5' U B2810 25.565 60.832 74.406 1.00 58.30 O
TER
Atoms:
OP1: (14.042,64.082,63.816)
OP2: (16.381,63.044,63.852)
C3': (19.671,65.905,62.556)
C1': (19.544,66.354,64.835)
C5': (17.261,65.267,62.351)
O4': (18.214,66.277,64.319)
C8: (18.912,64.169,65.885)
O2': (20.572,67.977,63.436)
C6: (21.818,62.588,67.099)
C5: (20.772,63.359,66.556)
C4: (21.062,64.568,65.977)
P: (15.516,64.241,63.973)
C4': (18.249,66.258,62.872)
C2': (20.470,66.582,63.655)
C2: (23.185,64.268,66.438)
N1: (23.055,63.083,67.023)
N3: (22.286,65.078,65.893)
N6: (21.631,61.399,67.685)
N7: (19.405,63.126,66.497)
N9: (19.856,65.085,65.534)
O5': (16.032,65.379,62.997)
O3': (20.020,66.267,61.268)
OP2: (16.381,63.044,63.852)
C3': (19.671,65.905,62.556)
C1': (19.544,66.354,64.835)
C5': (17.261,65.267,62.351)
O4': (18.214,66.277,64.319)
C8: (18.912,64.169,65.885)
O2': (20.572,67.977,63.436)
C6: (21.818,62.588,67.099)
C5: (20.772,63.359,66.556)
C4: (21.062,64.568,65.977)
P: (15.516,64.241,63.973)
C4': (18.249,66.258,62.872)
C2': (20.470,66.582,63.655)
C2: (23.185,64.268,66.438)
N1: (23.055,63.083,67.023)
N3: (22.286,65.078,65.893)
N6: (21.631,61.399,67.685)
N7: (19.405,63.126,66.497)
N9: (19.856,65.085,65.534)
O5': (16.032,65.379,62.997)
O3': (20.020,66.267,61.268)
C4: (20.380,66.125,69.053)
N3: (20.373,64.877,69.504)
OP1: (20.813,59.482,72.259)
OP2: (22.036,58.195,70.418)
C2: (21.463,64.231,69.982)
C1': (23.804,64.150,70.613)
C3': (24.347,62.297,72.022)
O5': (22.499,60.622,70.797)
O4': (24.028,63.051,69.781)
C5': (23.739,60.713,70.129)
P: (22.039,59.259,71.446)
C4': (24.493,61.927,70.552)
C2': (23.529,63.581,72.003)
O2': (23.852,64.502,73.020)
N1: (22.673,64.908,70.047)
O4: (19.293,66.491,68.652)
O2: (21.285,63.071,70.324)
C6: (22.737,66.194,69.617)
C5: (21.647,66.808,69.135)
O3': (25.631,62.541,72.588)
N3: (20.373,64.877,69.504)
OP1: (20.813,59.482,72.259)
OP2: (22.036,58.195,70.418)
C2: (21.463,64.231,69.982)
C1': (23.804,64.150,70.613)
C3': (24.347,62.297,72.022)
O5': (22.499,60.622,70.797)
O4': (24.028,63.051,69.781)
C5': (23.739,60.713,70.129)
P: (22.039,59.259,71.446)
C4': (24.493,61.927,70.552)
C2': (23.529,63.581,72.003)
O2': (23.852,64.502,73.020)
N1: (22.673,64.908,70.047)
O4: (19.293,66.491,68.652)
O2: (21.285,63.071,70.324)
C6: (22.737,66.194,69.617)
C5: (21.647,66.808,69.135)
O3': (25.631,62.541,72.588)
Image (generated by PyMOL):