Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A1971:A1712
Extra
PDB:
ATOM 1 O3' U A1970 -12.658 107.368 122.099 1.00 45.39 O
ATOM 2 P A A1971 -12.271 106.570 123.427 1.00 51.62 P
ATOM 3 OP1 A A1971 -12.795 105.190 123.241 1.00 49.53 O
ATOM 4 OP2 A A1971 -12.687 107.397 124.602 1.00 44.04 O
ATOM 5 O5' A A1971 -10.664 106.553 123.381 1.00 38.36 O
ATOM 6 C5' A A1971 -9.972 105.502 122.745 1.00 38.75 C
ATOM 7 C4' A A1971 -8.571 105.926 122.352 1.00 35.60 C
ATOM 8 O4' A A1971 -8.634 107.105 121.509 1.00 54.48 O
ATOM 9 C3' A A1971 -7.656 106.300 123.501 1.00 34.73 C
ATOM 10 O3' A A1971 -6.981 105.146 123.920 1.00 29.57 O
ATOM 11 C2' A A1971 -6.681 107.235 122.798 1.00 43.57 C
ATOM 12 O2' A A1971 -5.714 106.514 122.062 1.00 39.76 O
ATOM 13 C1' A A1971 -7.582 107.993 121.825 1.00 47.13 C
ATOM 14 N9 A A1971 -8.207 109.164 122.412 1.00 36.51 N
ATOM 15 C8 A A1971 -9.533 109.323 122.677 1.00 47.72 C
ATOM 16 N7 A A1971 -9.837 110.472 123.230 1.00 48.32 N
ATOM 17 C5 A A1971 -8.618 111.113 123.338 1.00 44.60 C
ATOM 18 C6 A A1971 -8.263 112.380 123.842 1.00 40.60 C
ATOM 19 N6 A A1971 -9.152 113.237 124.348 1.00 50.17 N
ATOM 20 N1 A A1971 -6.961 112.723 123.804 1.00 37.88 N
ATOM 21 C2 A A1971 -6.088 111.841 123.292 1.00 49.44 C
ATOM 22 N3 A A1971 -6.306 110.619 122.783 1.00 43.21 N
ATOM 23 C4 A A1971 -7.606 110.315 122.838 1.00 37.03 C
ATOM 24 P A A1972 -7.000 104.779 125.461 1.00 39.86 P
ATOM 25 OP1 A A1972 -6.392 103.444 125.615 1.00 49.55 O
ATOM 26 OP2 A A1972 -8.366 105.025 125.960 1.00 49.26 O
ATOM 27 O5' A A1972 -6.059 105.876 126.142 1.00 44.51 O
TER
ATOM 1 O3' U B1711 -7.933 106.858 116.752 1.00 45.71 O
ATOM 2 P U B1712 -7.677 107.413 115.280 1.00 48.52 P
ATOM 3 OP1 U B1712 -8.848 108.216 114.866 1.00 40.12 O
ATOM 4 OP2 U B1712 -7.200 106.326 114.412 1.00 30.03 O
ATOM 5 O5' U B1712 -6.473 108.415 115.520 1.00 31.93 O
ATOM 6 C5' U B1712 -6.186 109.326 114.480 1.00 39.53 C
ATOM 7 C4' U B1712 -5.287 110.422 115.005 1.00 35.34 C
ATOM 8 O4' U B1712 -6.056 111.287 115.870 1.00 30.25 O
ATOM 9 C3' U B1712 -4.131 109.918 115.853 1.00 45.43 C
ATOM 10 O3' U B1712 -3.055 110.816 115.740 1.00 48.10 O
ATOM 11 C2' U B1712 -4.721 109.940 117.244 1.00 42.97 C
ATOM 12 O2' U B1712 -3.703 110.031 118.212 1.00 49.07 O
ATOM 13 C1' U B1712 -5.497 111.242 117.156 1.00 40.24 C
ATOM 14 N1 U B1712 -6.596 111.299 118.124 1.00 42.00 N
ATOM 15 C2 U B1712 -6.626 112.349 119.011 1.00 46.49 C
ATOM 16 O2 U B1712 -5.791 113.229 119.008 1.00 53.05 O
ATOM 17 N3 U B1712 -7.668 112.339 119.900 1.00 49.40 N
ATOM 18 C4 U B1712 -8.661 111.388 119.977 1.00 49.35 C
ATOM 19 O4 U B1712 -9.534 111.504 120.821 1.00 47.43 O
ATOM 20 C5 U B1712 -8.562 110.320 119.018 1.00 52.91 C
ATOM 21 C6 U B1712 -7.552 110.310 118.140 1.00 45.52 C
ATOM 22 P C B1713 -2.046 110.662 114.496 1.00 39.28 P
ATOM 23 OP1 C B1713 -1.043 111.730 114.632 1.00 39.62 O
ATOM 24 OP2 C B1713 -2.746 110.489 113.210 1.00 39.57 O
ATOM 25 O5' C B1713 -1.335 109.281 114.892 1.00 59.51 O
TER
ATOM 2 P A A1971 -12.271 106.570 123.427 1.00 51.62 P
ATOM 3 OP1 A A1971 -12.795 105.190 123.241 1.00 49.53 O
ATOM 4 OP2 A A1971 -12.687 107.397 124.602 1.00 44.04 O
ATOM 5 O5' A A1971 -10.664 106.553 123.381 1.00 38.36 O
ATOM 6 C5' A A1971 -9.972 105.502 122.745 1.00 38.75 C
ATOM 7 C4' A A1971 -8.571 105.926 122.352 1.00 35.60 C
ATOM 8 O4' A A1971 -8.634 107.105 121.509 1.00 54.48 O
ATOM 9 C3' A A1971 -7.656 106.300 123.501 1.00 34.73 C
ATOM 10 O3' A A1971 -6.981 105.146 123.920 1.00 29.57 O
ATOM 11 C2' A A1971 -6.681 107.235 122.798 1.00 43.57 C
ATOM 12 O2' A A1971 -5.714 106.514 122.062 1.00 39.76 O
ATOM 13 C1' A A1971 -7.582 107.993 121.825 1.00 47.13 C
ATOM 14 N9 A A1971 -8.207 109.164 122.412 1.00 36.51 N
ATOM 15 C8 A A1971 -9.533 109.323 122.677 1.00 47.72 C
ATOM 16 N7 A A1971 -9.837 110.472 123.230 1.00 48.32 N
ATOM 17 C5 A A1971 -8.618 111.113 123.338 1.00 44.60 C
ATOM 18 C6 A A1971 -8.263 112.380 123.842 1.00 40.60 C
ATOM 19 N6 A A1971 -9.152 113.237 124.348 1.00 50.17 N
ATOM 20 N1 A A1971 -6.961 112.723 123.804 1.00 37.88 N
ATOM 21 C2 A A1971 -6.088 111.841 123.292 1.00 49.44 C
ATOM 22 N3 A A1971 -6.306 110.619 122.783 1.00 43.21 N
ATOM 23 C4 A A1971 -7.606 110.315 122.838 1.00 37.03 C
ATOM 24 P A A1972 -7.000 104.779 125.461 1.00 39.86 P
ATOM 25 OP1 A A1972 -6.392 103.444 125.615 1.00 49.55 O
ATOM 26 OP2 A A1972 -8.366 105.025 125.960 1.00 49.26 O
ATOM 27 O5' A A1972 -6.059 105.876 126.142 1.00 44.51 O
TER
ATOM 1 O3' U B1711 -7.933 106.858 116.752 1.00 45.71 O
ATOM 2 P U B1712 -7.677 107.413 115.280 1.00 48.52 P
ATOM 3 OP1 U B1712 -8.848 108.216 114.866 1.00 40.12 O
ATOM 4 OP2 U B1712 -7.200 106.326 114.412 1.00 30.03 O
ATOM 5 O5' U B1712 -6.473 108.415 115.520 1.00 31.93 O
ATOM 6 C5' U B1712 -6.186 109.326 114.480 1.00 39.53 C
ATOM 7 C4' U B1712 -5.287 110.422 115.005 1.00 35.34 C
ATOM 8 O4' U B1712 -6.056 111.287 115.870 1.00 30.25 O
ATOM 9 C3' U B1712 -4.131 109.918 115.853 1.00 45.43 C
ATOM 10 O3' U B1712 -3.055 110.816 115.740 1.00 48.10 O
ATOM 11 C2' U B1712 -4.721 109.940 117.244 1.00 42.97 C
ATOM 12 O2' U B1712 -3.703 110.031 118.212 1.00 49.07 O
ATOM 13 C1' U B1712 -5.497 111.242 117.156 1.00 40.24 C
ATOM 14 N1 U B1712 -6.596 111.299 118.124 1.00 42.00 N
ATOM 15 C2 U B1712 -6.626 112.349 119.011 1.00 46.49 C
ATOM 16 O2 U B1712 -5.791 113.229 119.008 1.00 53.05 O
ATOM 17 N3 U B1712 -7.668 112.339 119.900 1.00 49.40 N
ATOM 18 C4 U B1712 -8.661 111.388 119.977 1.00 49.35 C
ATOM 19 O4 U B1712 -9.534 111.504 120.821 1.00 47.43 O
ATOM 20 C5 U B1712 -8.562 110.320 119.018 1.00 52.91 C
ATOM 21 C6 U B1712 -7.552 110.310 118.140 1.00 45.52 C
ATOM 22 P C B1713 -2.046 110.662 114.496 1.00 39.28 P
ATOM 23 OP1 C B1713 -1.043 111.730 114.632 1.00 39.62 O
ATOM 24 OP2 C B1713 -2.746 110.489 113.210 1.00 39.57 O
ATOM 25 O5' C B1713 -1.335 109.281 114.892 1.00 59.51 O
TER
Atoms:
OP1: (-12.795,105.190,123.241)
OP2: (-12.687,107.397,124.602)
C3': (-7.656,106.300,123.501)
C1': (-7.582,107.993,121.825)
C5': (-9.972,105.502,122.745)
O4': (-8.634,107.105,121.509)
C8: (-9.533,109.323,122.677)
O2': (-5.714,106.514,122.062)
C6: (-8.263,112.380,123.842)
C5: (-8.618,111.113,123.338)
C4: (-7.606,110.315,122.838)
P: (-12.271,106.570,123.427)
C4': (-8.571,105.926,122.352)
C2': (-6.681,107.235,122.798)
C2: (-6.088,111.841,123.292)
N1: (-6.961,112.723,123.804)
N3: (-6.306,110.619,122.783)
N6: (-9.152,113.237,124.348)
N7: (-9.837,110.472,123.230)
N9: (-8.207,109.164,122.412)
O5': (-10.664,106.553,123.381)
O3': (-6.981,105.146,123.920)
OP2: (-12.687,107.397,124.602)
C3': (-7.656,106.300,123.501)
C1': (-7.582,107.993,121.825)
C5': (-9.972,105.502,122.745)
O4': (-8.634,107.105,121.509)
C8: (-9.533,109.323,122.677)
O2': (-5.714,106.514,122.062)
C6: (-8.263,112.380,123.842)
C5: (-8.618,111.113,123.338)
C4: (-7.606,110.315,122.838)
P: (-12.271,106.570,123.427)
C4': (-8.571,105.926,122.352)
C2': (-6.681,107.235,122.798)
C2: (-6.088,111.841,123.292)
N1: (-6.961,112.723,123.804)
N3: (-6.306,110.619,122.783)
N6: (-9.152,113.237,124.348)
N7: (-9.837,110.472,123.230)
N9: (-8.207,109.164,122.412)
O5': (-10.664,106.553,123.381)
O3': (-6.981,105.146,123.920)
C4: (-8.661,111.388,119.977)
N3: (-7.668,112.339,119.900)
OP1: (-8.848,108.216,114.866)
OP2: (-7.200,106.326,114.412)
C2: (-6.626,112.349,119.011)
C1': (-5.497,111.242,117.156)
C3': (-4.131,109.918,115.853)
O5': (-6.473,108.415,115.520)
O4': (-6.056,111.287,115.870)
C5': (-6.186,109.326,114.480)
P: (-7.677,107.413,115.280)
C4': (-5.287,110.422,115.005)
C2': (-4.721,109.940,117.244)
O2': (-3.703,110.031,118.212)
N1: (-6.596,111.299,118.124)
O4: (-9.534,111.504,120.821)
O2: (-5.791,113.229,119.008)
C6: (-7.552,110.310,118.140)
C5: (-8.562,110.320,119.018)
O3': (-3.055,110.816,115.740)
N3: (-7.668,112.339,119.900)
OP1: (-8.848,108.216,114.866)
OP2: (-7.200,106.326,114.412)
C2: (-6.626,112.349,119.011)
C1': (-5.497,111.242,117.156)
C3': (-4.131,109.918,115.853)
O5': (-6.473,108.415,115.520)
O4': (-6.056,111.287,115.870)
C5': (-6.186,109.326,114.480)
P: (-7.677,107.413,115.280)
C4': (-5.287,110.422,115.005)
C2': (-4.721,109.940,117.244)
O2': (-3.703,110.031,118.212)
N1: (-6.596,111.299,118.124)
O4: (-9.534,111.504,120.821)
O2: (-5.791,113.229,119.008)
C6: (-7.552,110.310,118.140)
C5: (-8.562,110.320,119.018)
O3': (-3.055,110.816,115.740)
Image (generated by PyMOL):