Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11350:11349
Extra
PDB:
ATOM 1 O3' U A1349 81.071 -4.005 53.186 1.00 36.36 O
ATOM 2 P A A1350 81.427 -3.233 54.509 1.00 32.69 P
ATOM 3 OP1 A A1350 81.069 -1.775 54.293 1.00 32.67 O
ATOM 4 OP2 A A1350 82.783 -3.584 54.849 1.00 32.90 O
ATOM 5 O5' A A1350 80.460 -3.879 55.555 1.00 32.48 O
ATOM 6 C5' A A1350 79.159 -3.387 55.729 1.00 32.27 C
ATOM 7 C4' A A1350 78.405 -4.286 56.626 1.00 32.12 C
ATOM 8 O4' A A1350 78.735 -5.652 56.307 1.00 32.17 O
ATOM 9 C3' A A1350 78.740 -4.142 58.065 1.00 32.14 C
ATOM 10 O3' A A1350 78.002 -3.106 58.649 1.00 32.03 O
ATOM 11 C2' A A1350 78.439 -5.525 58.641 1.00 32.07 C
ATOM 12 O2' A A1350 77.080 -5.648 58.970 1.00 31.85 O
ATOM 13 C1' A A1350 78.715 -6.440 57.454 1.00 32.13 C
ATOM 14 N9 A A1350 80.007 -7.154 57.525 1.00 32.34 N
ATOM 15 C8 A A1350 81.208 -6.672 57.076 1.00 32.55 C
ATOM 16 N7 A A1350 82.152 -7.545 57.175 1.00 32.72 N
ATOM 17 C5 A A1350 81.573 -8.682 57.691 1.00 32.62 C
ATOM 18 C6 A A1350 82.095 -9.926 58.012 1.00 32.73 C
ATOM 19 N6 A A1350 83.403 -10.281 57.823 1.00 32.97 N
ATOM 20 N1 A A1350 81.241 -10.830 58.498 1.00 32.60 N
ATOM 21 C2 A A1350 79.989 -10.508 58.650 1.00 32.37 C
ATOM 22 N3 A A1350 79.387 -9.352 58.394 1.00 32.25 N
ATOM 23 C4 A A1350 80.259 -8.464 57.908 1.00 32.39 C
ATOM 24 P A A1351 78.552 -2.300 59.917 1.00 32.07 P
ATOM 25 OP1 A A1351 77.753 -1.082 60.015 1.00 31.98 O
ATOM 26 OP2 A A1351 80.039 -2.163 59.774 1.00 32.31 O
ATOM 27 O5' A A1351 78.219 -3.271 61.118 1.00 31.99 O
TER
ATOM 1 O3' G B1348 86.075 -7.052 53.891 1.00 35.74 O
ATOM 2 P U B1349 85.646 -6.814 52.376 1.00 37.20 P
ATOM 3 OP1 U B1349 85.804 -8.116 51.671 1.00 37.28 O
ATOM 4 OP2 U B1349 86.379 -5.624 51.877 1.00 37.36 O
ATOM 5 O5' U B1349 84.108 -6.471 52.530 1.00 36.91 O
ATOM 6 C5' U B1349 83.468 -5.550 51.680 1.00 36.84 C
ATOM 7 C4' U B1349 81.993 -5.724 51.746 1.00 36.58 C
ATOM 8 O4' U B1349 81.666 -7.123 51.555 1.00 36.54 O
ATOM 9 C3' U B1349 81.325 -5.375 53.070 1.00 36.40 C
ATOM 10 O3' U B1349 81.071 -4.005 53.186 1.00 36.36 O
ATOM 11 C2' U B1349 80.045 -6.179 53.003 1.00 36.19 C
ATOM 12 O2' U B1349 79.097 -5.505 52.220 1.00 36.09 O
ATOM 13 C1' U B1349 80.477 -7.420 52.241 1.00 36.31 C
ATOM 14 N1 U B1349 80.731 -8.509 53.134 1.00 36.32 N
ATOM 15 C2 U B1349 79.589 -9.184 53.534 1.00 36.13 C
ATOM 16 O2 U B1349 78.486 -8.880 53.154 1.00 35.97 O
ATOM 17 N3 U B1349 79.810 -10.224 54.374 1.00 36.15 N
ATOM 18 C4 U B1349 81.081 -10.564 54.782 1.00 36.35 C
ATOM 19 O4 U B1349 81.163 -11.508 55.521 1.00 36.37 O
ATOM 20 C5 U B1349 82.199 -9.829 54.324 1.00 36.54 C
ATOM 21 C6 U B1349 81.999 -8.815 53.517 1.00 36.52 C
ATOM 22 P A B1350 81.427 -3.233 54.509 1.00 32.69 P
ATOM 23 OP1 A B1350 81.069 -1.775 54.293 1.00 32.67 O
ATOM 24 OP2 A B1350 82.783 -3.584 54.849 1.00 32.90 O
ATOM 25 O5' A B1350 80.460 -3.879 55.555 1.00 32.48 O
TER
ATOM 2 P A A1350 81.427 -3.233 54.509 1.00 32.69 P
ATOM 3 OP1 A A1350 81.069 -1.775 54.293 1.00 32.67 O
ATOM 4 OP2 A A1350 82.783 -3.584 54.849 1.00 32.90 O
ATOM 5 O5' A A1350 80.460 -3.879 55.555 1.00 32.48 O
ATOM 6 C5' A A1350 79.159 -3.387 55.729 1.00 32.27 C
ATOM 7 C4' A A1350 78.405 -4.286 56.626 1.00 32.12 C
ATOM 8 O4' A A1350 78.735 -5.652 56.307 1.00 32.17 O
ATOM 9 C3' A A1350 78.740 -4.142 58.065 1.00 32.14 C
ATOM 10 O3' A A1350 78.002 -3.106 58.649 1.00 32.03 O
ATOM 11 C2' A A1350 78.439 -5.525 58.641 1.00 32.07 C
ATOM 12 O2' A A1350 77.080 -5.648 58.970 1.00 31.85 O
ATOM 13 C1' A A1350 78.715 -6.440 57.454 1.00 32.13 C
ATOM 14 N9 A A1350 80.007 -7.154 57.525 1.00 32.34 N
ATOM 15 C8 A A1350 81.208 -6.672 57.076 1.00 32.55 C
ATOM 16 N7 A A1350 82.152 -7.545 57.175 1.00 32.72 N
ATOM 17 C5 A A1350 81.573 -8.682 57.691 1.00 32.62 C
ATOM 18 C6 A A1350 82.095 -9.926 58.012 1.00 32.73 C
ATOM 19 N6 A A1350 83.403 -10.281 57.823 1.00 32.97 N
ATOM 20 N1 A A1350 81.241 -10.830 58.498 1.00 32.60 N
ATOM 21 C2 A A1350 79.989 -10.508 58.650 1.00 32.37 C
ATOM 22 N3 A A1350 79.387 -9.352 58.394 1.00 32.25 N
ATOM 23 C4 A A1350 80.259 -8.464 57.908 1.00 32.39 C
ATOM 24 P A A1351 78.552 -2.300 59.917 1.00 32.07 P
ATOM 25 OP1 A A1351 77.753 -1.082 60.015 1.00 31.98 O
ATOM 26 OP2 A A1351 80.039 -2.163 59.774 1.00 32.31 O
ATOM 27 O5' A A1351 78.219 -3.271 61.118 1.00 31.99 O
TER
ATOM 1 O3' G B1348 86.075 -7.052 53.891 1.00 35.74 O
ATOM 2 P U B1349 85.646 -6.814 52.376 1.00 37.20 P
ATOM 3 OP1 U B1349 85.804 -8.116 51.671 1.00 37.28 O
ATOM 4 OP2 U B1349 86.379 -5.624 51.877 1.00 37.36 O
ATOM 5 O5' U B1349 84.108 -6.471 52.530 1.00 36.91 O
ATOM 6 C5' U B1349 83.468 -5.550 51.680 1.00 36.84 C
ATOM 7 C4' U B1349 81.993 -5.724 51.746 1.00 36.58 C
ATOM 8 O4' U B1349 81.666 -7.123 51.555 1.00 36.54 O
ATOM 9 C3' U B1349 81.325 -5.375 53.070 1.00 36.40 C
ATOM 10 O3' U B1349 81.071 -4.005 53.186 1.00 36.36 O
ATOM 11 C2' U B1349 80.045 -6.179 53.003 1.00 36.19 C
ATOM 12 O2' U B1349 79.097 -5.505 52.220 1.00 36.09 O
ATOM 13 C1' U B1349 80.477 -7.420 52.241 1.00 36.31 C
ATOM 14 N1 U B1349 80.731 -8.509 53.134 1.00 36.32 N
ATOM 15 C2 U B1349 79.589 -9.184 53.534 1.00 36.13 C
ATOM 16 O2 U B1349 78.486 -8.880 53.154 1.00 35.97 O
ATOM 17 N3 U B1349 79.810 -10.224 54.374 1.00 36.15 N
ATOM 18 C4 U B1349 81.081 -10.564 54.782 1.00 36.35 C
ATOM 19 O4 U B1349 81.163 -11.508 55.521 1.00 36.37 O
ATOM 20 C5 U B1349 82.199 -9.829 54.324 1.00 36.54 C
ATOM 21 C6 U B1349 81.999 -8.815 53.517 1.00 36.52 C
ATOM 22 P A B1350 81.427 -3.233 54.509 1.00 32.69 P
ATOM 23 OP1 A B1350 81.069 -1.775 54.293 1.00 32.67 O
ATOM 24 OP2 A B1350 82.783 -3.584 54.849 1.00 32.90 O
ATOM 25 O5' A B1350 80.460 -3.879 55.555 1.00 32.48 O
TER
Atoms:
OP1: (81.069,-1.775,54.293)
OP2: (82.783,-3.584,54.849)
C3': (78.740,-4.142,58.065)
C1': (78.715,-6.440,57.454)
C5': (79.159,-3.387,55.729)
O4': (78.735,-5.652,56.307)
C8: (81.208,-6.672,57.076)
O2': (77.080,-5.648,58.970)
C6: (82.095,-9.926,58.012)
C5: (81.573,-8.682,57.691)
C4: (80.259,-8.464,57.908)
P: (81.427,-3.233,54.509)
C4': (78.405,-4.286,56.626)
C2': (78.439,-5.525,58.641)
C2: (79.989,-10.508,58.650)
N1: (81.241,-10.830,58.498)
N3: (79.387,-9.352,58.394)
N6: (83.403,-10.281,57.823)
N7: (82.152,-7.545,57.175)
N9: (80.007,-7.154,57.525)
O5': (80.460,-3.879,55.555)
O3': (78.002,-3.106,58.649)
OP2: (82.783,-3.584,54.849)
C3': (78.740,-4.142,58.065)
C1': (78.715,-6.440,57.454)
C5': (79.159,-3.387,55.729)
O4': (78.735,-5.652,56.307)
C8: (81.208,-6.672,57.076)
O2': (77.080,-5.648,58.970)
C6: (82.095,-9.926,58.012)
C5: (81.573,-8.682,57.691)
C4: (80.259,-8.464,57.908)
P: (81.427,-3.233,54.509)
C4': (78.405,-4.286,56.626)
C2': (78.439,-5.525,58.641)
C2: (79.989,-10.508,58.650)
N1: (81.241,-10.830,58.498)
N3: (79.387,-9.352,58.394)
N6: (83.403,-10.281,57.823)
N7: (82.152,-7.545,57.175)
N9: (80.007,-7.154,57.525)
O5': (80.460,-3.879,55.555)
O3': (78.002,-3.106,58.649)
C4: (81.081,-10.564,54.782)
N3: (79.810,-10.224,54.374)
OP1: (85.804,-8.116,51.671)
OP2: (86.379,-5.624,51.877)
C2: (79.589,-9.184,53.534)
C1': (80.477,-7.420,52.241)
C3': (81.325,-5.375,53.070)
O5': (84.108,-6.471,52.530)
O4': (81.666,-7.123,51.555)
C5': (83.468,-5.550,51.680)
P: (85.646,-6.814,52.376)
C4': (81.993,-5.724,51.746)
C2': (80.045,-6.179,53.003)
O2': (79.097,-5.505,52.220)
N1: (80.731,-8.509,53.134)
O4: (81.163,-11.508,55.521)
O2: (78.486,-8.880,53.154)
C6: (81.999,-8.815,53.517)
C5: (82.199,-9.829,54.324)
O3': (81.071,-4.005,53.186)
N3: (79.810,-10.224,54.374)
OP1: (85.804,-8.116,51.671)
OP2: (86.379,-5.624,51.877)
C2: (79.589,-9.184,53.534)
C1': (80.477,-7.420,52.241)
C3': (81.325,-5.375,53.070)
O5': (84.108,-6.471,52.530)
O4': (81.666,-7.123,51.555)
C5': (83.468,-5.550,51.680)
P: (85.646,-6.814,52.376)
C4': (81.993,-5.724,51.746)
C2': (80.045,-6.179,53.003)
O2': (79.097,-5.505,52.220)
N1: (80.731,-8.509,53.134)
O4: (81.163,-11.508,55.521)
O2: (78.486,-8.880,53.154)
C6: (81.999,-8.815,53.517)
C5: (82.199,-9.829,54.324)
O3': (81.071,-4.005,53.186)
Image (generated by PyMOL):