Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02373:02372
Extra
PDB:
ATOM 1 O3' U A2372 62.211 99.723 102.663 1.00 40.24 O
ATOM 2 P A A2373 62.493 99.942 101.097 1.00 40.81 P
ATOM 3 OP1 A A2373 62.003 98.718 100.402 1.00 41.35 O
ATOM 4 OP2 A A2373 63.896 100.386 100.906 1.00 39.79 O
ATOM 5 O5' A A2373 61.529 101.142 100.693 1.00 41.52 O
ATOM 6 C5' A A2373 60.143 101.146 101.092 1.00 39.94 C
ATOM 7 C4' A A2373 59.593 102.544 101.002 1.00 39.31 C
ATOM 8 O4' A A2373 60.482 103.430 101.744 1.00 39.31 O
ATOM 9 C3' A A2373 59.527 103.113 99.591 1.00 37.60 C
ATOM 10 O3' A A2373 58.444 104.057 99.528 1.00 36.81 O
ATOM 11 C2' A A2373 60.901 103.766 99.451 1.00 37.20 C
ATOM 12 O2' A A2373 60.970 104.748 98.441 1.00 34.75 O
ATOM 13 C1' A A2373 61.106 104.341 100.858 1.00 38.92 C
ATOM 14 N9 A A2373 62.503 104.490 101.280 1.00 39.52 N
ATOM 15 C8 A A2373 63.527 103.587 101.128 1.00 40.07 C
ATOM 16 N7 A A2373 64.676 104.004 101.600 1.00 39.00 N
ATOM 17 C5 A A2373 64.393 105.267 102.102 1.00 39.95 C
ATOM 18 C6 A A2373 65.200 106.242 102.738 1.00 40.95 C
ATOM 19 N6 A A2373 66.506 106.084 102.987 1.00 42.20 N
ATOM 20 N1 A A2373 64.611 107.397 103.112 1.00 39.28 N
ATOM 21 C2 A A2373 63.305 107.554 102.867 1.00 41.37 C
ATOM 22 N3 A A2373 62.444 106.717 102.281 1.00 42.39 N
ATOM 23 C4 A A2373 63.058 105.578 101.917 1.00 39.73 C
ATOM 24 P C A2374 57.344 103.939 98.361 1.00 38.73 P
ATOM 25 OP1 C A2374 57.610 102.669 97.628 1.00 39.59 O
ATOM 26 OP2 C A2374 57.304 105.228 97.620 1.00 37.20 O
ATOM 27 O5' C A2374 55.921 103.764 99.061 1.00 35.87 O
TER
ATOM 1 O3' C B2371 67.358 99.731 106.031 1.00 42.38 O
ATOM 2 P U B2372 67.033 100.110 104.505 1.00 41.85 P
ATOM 3 OP1 U B2372 67.305 98.881 103.714 1.00 41.88 O
ATOM 4 OP2 U B2372 67.728 101.377 104.161 1.00 40.85 O
ATOM 5 O5' U B2372 65.467 100.387 104.496 1.00 42.05 O
ATOM 6 C5' U B2372 64.519 99.352 104.818 1.00 39.75 C
ATOM 7 C4' U B2372 63.128 99.930 104.872 1.00 38.38 C
ATOM 8 O4' U B2372 63.084 100.962 105.885 1.00 39.91 O
ATOM 9 C3' U B2372 62.695 100.664 103.615 1.00 38.45 C
ATOM 10 O3' U B2372 62.211 99.723 102.663 1.00 40.24 O
ATOM 11 C2' U B2372 61.589 101.583 104.130 1.00 39.03 C
ATOM 12 O2' U B2372 60.328 100.951 104.229 1.00 39.95 O
ATOM 13 C1' U B2372 62.082 101.905 105.545 1.00 39.24 C
ATOM 14 N1 U B2372 62.591 103.269 105.770 1.00 38.04 N
ATOM 15 C2 U B2372 61.666 104.244 106.107 1.00 39.03 C
ATOM 16 O2 U B2372 60.472 104.018 106.217 1.00 41.70 O
ATOM 17 N3 U B2372 62.189 105.497 106.310 1.00 37.81 N
ATOM 18 C4 U B2372 63.509 105.873 106.209 1.00 36.64 C
ATOM 19 O4 U B2372 63.818 107.050 106.397 1.00 33.19 O
ATOM 20 C5 U B2372 64.404 104.812 105.856 1.00 36.63 C
ATOM 21 C6 U B2372 63.927 103.578 105.654 1.00 36.25 C
ATOM 22 P A B2373 62.493 99.942 101.097 1.00 40.81 P
ATOM 23 OP1 A B2373 62.003 98.718 100.402 1.00 41.35 O
ATOM 24 OP2 A B2373 63.896 100.386 100.906 1.00 39.79 O
ATOM 25 O5' A B2373 61.529 101.142 100.693 1.00 41.52 O
TER
ATOM 2 P A A2373 62.493 99.942 101.097 1.00 40.81 P
ATOM 3 OP1 A A2373 62.003 98.718 100.402 1.00 41.35 O
ATOM 4 OP2 A A2373 63.896 100.386 100.906 1.00 39.79 O
ATOM 5 O5' A A2373 61.529 101.142 100.693 1.00 41.52 O
ATOM 6 C5' A A2373 60.143 101.146 101.092 1.00 39.94 C
ATOM 7 C4' A A2373 59.593 102.544 101.002 1.00 39.31 C
ATOM 8 O4' A A2373 60.482 103.430 101.744 1.00 39.31 O
ATOM 9 C3' A A2373 59.527 103.113 99.591 1.00 37.60 C
ATOM 10 O3' A A2373 58.444 104.057 99.528 1.00 36.81 O
ATOM 11 C2' A A2373 60.901 103.766 99.451 1.00 37.20 C
ATOM 12 O2' A A2373 60.970 104.748 98.441 1.00 34.75 O
ATOM 13 C1' A A2373 61.106 104.341 100.858 1.00 38.92 C
ATOM 14 N9 A A2373 62.503 104.490 101.280 1.00 39.52 N
ATOM 15 C8 A A2373 63.527 103.587 101.128 1.00 40.07 C
ATOM 16 N7 A A2373 64.676 104.004 101.600 1.00 39.00 N
ATOM 17 C5 A A2373 64.393 105.267 102.102 1.00 39.95 C
ATOM 18 C6 A A2373 65.200 106.242 102.738 1.00 40.95 C
ATOM 19 N6 A A2373 66.506 106.084 102.987 1.00 42.20 N
ATOM 20 N1 A A2373 64.611 107.397 103.112 1.00 39.28 N
ATOM 21 C2 A A2373 63.305 107.554 102.867 1.00 41.37 C
ATOM 22 N3 A A2373 62.444 106.717 102.281 1.00 42.39 N
ATOM 23 C4 A A2373 63.058 105.578 101.917 1.00 39.73 C
ATOM 24 P C A2374 57.344 103.939 98.361 1.00 38.73 P
ATOM 25 OP1 C A2374 57.610 102.669 97.628 1.00 39.59 O
ATOM 26 OP2 C A2374 57.304 105.228 97.620 1.00 37.20 O
ATOM 27 O5' C A2374 55.921 103.764 99.061 1.00 35.87 O
TER
ATOM 1 O3' C B2371 67.358 99.731 106.031 1.00 42.38 O
ATOM 2 P U B2372 67.033 100.110 104.505 1.00 41.85 P
ATOM 3 OP1 U B2372 67.305 98.881 103.714 1.00 41.88 O
ATOM 4 OP2 U B2372 67.728 101.377 104.161 1.00 40.85 O
ATOM 5 O5' U B2372 65.467 100.387 104.496 1.00 42.05 O
ATOM 6 C5' U B2372 64.519 99.352 104.818 1.00 39.75 C
ATOM 7 C4' U B2372 63.128 99.930 104.872 1.00 38.38 C
ATOM 8 O4' U B2372 63.084 100.962 105.885 1.00 39.91 O
ATOM 9 C3' U B2372 62.695 100.664 103.615 1.00 38.45 C
ATOM 10 O3' U B2372 62.211 99.723 102.663 1.00 40.24 O
ATOM 11 C2' U B2372 61.589 101.583 104.130 1.00 39.03 C
ATOM 12 O2' U B2372 60.328 100.951 104.229 1.00 39.95 O
ATOM 13 C1' U B2372 62.082 101.905 105.545 1.00 39.24 C
ATOM 14 N1 U B2372 62.591 103.269 105.770 1.00 38.04 N
ATOM 15 C2 U B2372 61.666 104.244 106.107 1.00 39.03 C
ATOM 16 O2 U B2372 60.472 104.018 106.217 1.00 41.70 O
ATOM 17 N3 U B2372 62.189 105.497 106.310 1.00 37.81 N
ATOM 18 C4 U B2372 63.509 105.873 106.209 1.00 36.64 C
ATOM 19 O4 U B2372 63.818 107.050 106.397 1.00 33.19 O
ATOM 20 C5 U B2372 64.404 104.812 105.856 1.00 36.63 C
ATOM 21 C6 U B2372 63.927 103.578 105.654 1.00 36.25 C
ATOM 22 P A B2373 62.493 99.942 101.097 1.00 40.81 P
ATOM 23 OP1 A B2373 62.003 98.718 100.402 1.00 41.35 O
ATOM 24 OP2 A B2373 63.896 100.386 100.906 1.00 39.79 O
ATOM 25 O5' A B2373 61.529 101.142 100.693 1.00 41.52 O
TER
Atoms:
OP1: (62.003,98.718,100.402)
OP2: (63.896,100.386,100.906)
C3': (59.527,103.113,99.591)
C1': (61.106,104.341,100.858)
C5': (60.143,101.146,101.092)
O4': (60.482,103.430,101.744)
C8: (63.527,103.587,101.128)
O2': (60.970,104.748,98.441)
C6: (65.200,106.242,102.738)
C5: (64.393,105.267,102.102)
C4: (63.058,105.578,101.917)
P: (62.493,99.942,101.097)
C4': (59.593,102.544,101.002)
C2': (60.901,103.766,99.451)
C2: (63.305,107.554,102.867)
N1: (64.611,107.397,103.112)
N3: (62.444,106.717,102.281)
N6: (66.506,106.084,102.987)
N7: (64.676,104.004,101.600)
N9: (62.503,104.490,101.280)
O5': (61.529,101.142,100.693)
O3': (58.444,104.057,99.528)
OP2: (63.896,100.386,100.906)
C3': (59.527,103.113,99.591)
C1': (61.106,104.341,100.858)
C5': (60.143,101.146,101.092)
O4': (60.482,103.430,101.744)
C8: (63.527,103.587,101.128)
O2': (60.970,104.748,98.441)
C6: (65.200,106.242,102.738)
C5: (64.393,105.267,102.102)
C4: (63.058,105.578,101.917)
P: (62.493,99.942,101.097)
C4': (59.593,102.544,101.002)
C2': (60.901,103.766,99.451)
C2: (63.305,107.554,102.867)
N1: (64.611,107.397,103.112)
N3: (62.444,106.717,102.281)
N6: (66.506,106.084,102.987)
N7: (64.676,104.004,101.600)
N9: (62.503,104.490,101.280)
O5': (61.529,101.142,100.693)
O3': (58.444,104.057,99.528)
C4: (63.509,105.873,106.209)
N3: (62.189,105.497,106.310)
OP1: (67.305,98.881,103.714)
OP2: (67.728,101.377,104.161)
C2: (61.666,104.244,106.107)
C1': (62.082,101.905,105.545)
C3': (62.695,100.664,103.615)
O5': (65.467,100.387,104.496)
O4': (63.084,100.962,105.885)
C5': (64.519,99.352,104.818)
P: (67.033,100.110,104.505)
C4': (63.128,99.930,104.872)
C2': (61.589,101.583,104.130)
O2': (60.328,100.951,104.229)
N1: (62.591,103.269,105.770)
O4: (63.818,107.050,106.397)
O2: (60.472,104.018,106.217)
C6: (63.927,103.578,105.654)
C5: (64.404,104.812,105.856)
O3': (62.211,99.723,102.663)
N3: (62.189,105.497,106.310)
OP1: (67.305,98.881,103.714)
OP2: (67.728,101.377,104.161)
C2: (61.666,104.244,106.107)
C1': (62.082,101.905,105.545)
C3': (62.695,100.664,103.615)
O5': (65.467,100.387,104.496)
O4': (63.084,100.962,105.885)
C5': (64.519,99.352,104.818)
P: (67.033,100.110,104.505)
C4': (63.128,99.930,104.872)
C2': (61.589,101.583,104.130)
O2': (60.328,100.951,104.229)
N1: (62.591,103.269,105.770)
O4: (63.818,107.050,106.397)
O2: (60.472,104.018,106.217)
C6: (63.927,103.578,105.654)
C5: (64.404,104.812,105.856)
O3': (62.211,99.723,102.663)
Image (generated by PyMOL):