Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0222:0221
Extra
PDB:
ATOM 1 O3' U A 221 49.587 106.920 20.704 1.00 45.12 O
ATOM 2 P A A 222 49.410 107.044 19.115 1.00 47.63 P
ATOM 3 OP1 A A 222 48.435 108.147 18.903 1.00 46.82 O
ATOM 4 OP2 A A 222 49.155 105.715 18.512 1.00 48.31 O
ATOM 5 O5' A A 222 50.851 107.507 18.630 1.00 47.23 O
ATOM 6 C5' A A 222 51.435 108.709 19.162 1.00 48.02 C
ATOM 7 C4' A A 222 52.909 108.738 18.889 1.00 46.83 C
ATOM 8 O4' A A 222 53.570 107.690 19.642 1.00 45.66 O
ATOM 9 C3' A A 222 53.302 108.448 17.457 1.00 48.21 C
ATOM 10 O3' A A 222 53.112 109.575 16.615 1.00 51.41 O
ATOM 11 C2' A A 222 54.755 108.019 17.611 1.00 47.34 C
ATOM 12 O2' A A 222 55.648 109.102 17.803 1.00 47.87 O
ATOM 13 C1' A A 222 54.677 107.199 18.900 1.00 45.70 C
ATOM 14 N9 A A 222 54.470 105.776 18.632 1.00 43.69 N
ATOM 15 C8 A A 222 53.287 105.092 18.484 1.00 42.60 C
ATOM 16 N7 A A 222 53.449 103.817 18.225 1.00 42.55 N
ATOM 17 C5 A A 222 54.824 103.649 18.203 1.00 40.43 C
ATOM 18 C6 A A 222 55.635 102.527 17.980 1.00 40.68 C
ATOM 19 N6 A A 222 55.160 101.314 17.718 1.00 43.72 N
ATOM 20 N1 A A 222 56.974 102.694 18.036 1.00 42.44 N
ATOM 21 C2 A A 222 57.453 103.916 18.298 1.00 43.55 C
ATOM 22 N3 A A 222 56.791 105.051 18.522 1.00 42.84 N
ATOM 23 C4 A A 222 55.465 104.845 18.460 1.00 42.04 C
ATOM 24 P C A 223 53.319 109.419 15.027 1.00 53.85 P
ATOM 25 OP1 C A 223 53.269 110.781 14.440 1.00 56.44 O
ATOM 26 OP2 C A 223 52.424 108.352 14.500 1.00 53.37 O
ATOM 27 O5' C A 223 54.821 108.918 14.940 1.00 53.06 O
TER
ATOM 1 O3' A B 220 48.287 101.149 21.972 1.00 44.71 O
ATOM 2 P U B 221 48.470 101.920 20.577 1.00 46.21 P
ATOM 3 OP1 U B 221 47.096 102.295 20.138 1.00 41.62 O
ATOM 4 OP2 U B 221 49.361 101.128 19.670 1.00 38.01 O
ATOM 5 O5' U B 221 49.242 103.244 21.006 1.00 45.21 O
ATOM 6 C5' U B 221 48.632 104.181 21.910 1.00 44.79 C
ATOM 7 C4' U B 221 49.643 105.197 22.361 1.00 45.95 C
ATOM 8 O4' U B 221 50.690 104.557 23.134 1.00 46.43 O
ATOM 9 C3' U B 221 50.393 105.887 21.242 1.00 44.94 C
ATOM 10 O3' U B 221 49.587 106.920 20.704 1.00 45.12 O
ATOM 11 C2' U B 221 51.632 106.396 21.963 1.00 44.17 C
ATOM 12 O2' U B 221 51.354 107.552 22.727 1.00 45.29 O
ATOM 13 C1' U B 221 51.915 105.235 22.921 1.00 44.38 C
ATOM 14 N1 U B 221 52.892 104.260 22.422 1.00 43.78 N
ATOM 15 C2 U B 221 54.231 104.476 22.705 1.00 45.27 C
ATOM 16 O2 U B 221 54.635 105.439 23.339 1.00 47.77 O
ATOM 17 N3 U B 221 55.085 103.525 22.210 1.00 44.14 N
ATOM 18 C4 U B 221 54.751 102.418 21.464 1.00 42.82 C
ATOM 19 O4 U B 221 55.640 101.668 21.067 1.00 44.48 O
ATOM 20 C5 U B 221 53.356 102.259 21.222 1.00 42.90 C
ATOM 21 C6 U B 221 52.493 103.159 21.701 1.00 44.06 C
ATOM 22 P A B 222 49.410 107.044 19.115 1.00 47.63 P
ATOM 23 OP1 A B 222 48.435 108.147 18.903 1.00 46.82 O
ATOM 24 OP2 A B 222 49.155 105.715 18.512 1.00 48.31 O
ATOM 25 O5' A B 222 50.851 107.507 18.630 1.00 47.23 O
TER
ATOM 2 P A A 222 49.410 107.044 19.115 1.00 47.63 P
ATOM 3 OP1 A A 222 48.435 108.147 18.903 1.00 46.82 O
ATOM 4 OP2 A A 222 49.155 105.715 18.512 1.00 48.31 O
ATOM 5 O5' A A 222 50.851 107.507 18.630 1.00 47.23 O
ATOM 6 C5' A A 222 51.435 108.709 19.162 1.00 48.02 C
ATOM 7 C4' A A 222 52.909 108.738 18.889 1.00 46.83 C
ATOM 8 O4' A A 222 53.570 107.690 19.642 1.00 45.66 O
ATOM 9 C3' A A 222 53.302 108.448 17.457 1.00 48.21 C
ATOM 10 O3' A A 222 53.112 109.575 16.615 1.00 51.41 O
ATOM 11 C2' A A 222 54.755 108.019 17.611 1.00 47.34 C
ATOM 12 O2' A A 222 55.648 109.102 17.803 1.00 47.87 O
ATOM 13 C1' A A 222 54.677 107.199 18.900 1.00 45.70 C
ATOM 14 N9 A A 222 54.470 105.776 18.632 1.00 43.69 N
ATOM 15 C8 A A 222 53.287 105.092 18.484 1.00 42.60 C
ATOM 16 N7 A A 222 53.449 103.817 18.225 1.00 42.55 N
ATOM 17 C5 A A 222 54.824 103.649 18.203 1.00 40.43 C
ATOM 18 C6 A A 222 55.635 102.527 17.980 1.00 40.68 C
ATOM 19 N6 A A 222 55.160 101.314 17.718 1.00 43.72 N
ATOM 20 N1 A A 222 56.974 102.694 18.036 1.00 42.44 N
ATOM 21 C2 A A 222 57.453 103.916 18.298 1.00 43.55 C
ATOM 22 N3 A A 222 56.791 105.051 18.522 1.00 42.84 N
ATOM 23 C4 A A 222 55.465 104.845 18.460 1.00 42.04 C
ATOM 24 P C A 223 53.319 109.419 15.027 1.00 53.85 P
ATOM 25 OP1 C A 223 53.269 110.781 14.440 1.00 56.44 O
ATOM 26 OP2 C A 223 52.424 108.352 14.500 1.00 53.37 O
ATOM 27 O5' C A 223 54.821 108.918 14.940 1.00 53.06 O
TER
ATOM 1 O3' A B 220 48.287 101.149 21.972 1.00 44.71 O
ATOM 2 P U B 221 48.470 101.920 20.577 1.00 46.21 P
ATOM 3 OP1 U B 221 47.096 102.295 20.138 1.00 41.62 O
ATOM 4 OP2 U B 221 49.361 101.128 19.670 1.00 38.01 O
ATOM 5 O5' U B 221 49.242 103.244 21.006 1.00 45.21 O
ATOM 6 C5' U B 221 48.632 104.181 21.910 1.00 44.79 C
ATOM 7 C4' U B 221 49.643 105.197 22.361 1.00 45.95 C
ATOM 8 O4' U B 221 50.690 104.557 23.134 1.00 46.43 O
ATOM 9 C3' U B 221 50.393 105.887 21.242 1.00 44.94 C
ATOM 10 O3' U B 221 49.587 106.920 20.704 1.00 45.12 O
ATOM 11 C2' U B 221 51.632 106.396 21.963 1.00 44.17 C
ATOM 12 O2' U B 221 51.354 107.552 22.727 1.00 45.29 O
ATOM 13 C1' U B 221 51.915 105.235 22.921 1.00 44.38 C
ATOM 14 N1 U B 221 52.892 104.260 22.422 1.00 43.78 N
ATOM 15 C2 U B 221 54.231 104.476 22.705 1.00 45.27 C
ATOM 16 O2 U B 221 54.635 105.439 23.339 1.00 47.77 O
ATOM 17 N3 U B 221 55.085 103.525 22.210 1.00 44.14 N
ATOM 18 C4 U B 221 54.751 102.418 21.464 1.00 42.82 C
ATOM 19 O4 U B 221 55.640 101.668 21.067 1.00 44.48 O
ATOM 20 C5 U B 221 53.356 102.259 21.222 1.00 42.90 C
ATOM 21 C6 U B 221 52.493 103.159 21.701 1.00 44.06 C
ATOM 22 P A B 222 49.410 107.044 19.115 1.00 47.63 P
ATOM 23 OP1 A B 222 48.435 108.147 18.903 1.00 46.82 O
ATOM 24 OP2 A B 222 49.155 105.715 18.512 1.00 48.31 O
ATOM 25 O5' A B 222 50.851 107.507 18.630 1.00 47.23 O
TER
Atoms:
OP1: (48.435,108.147,18.903)
OP2: (49.155,105.715,18.512)
C3': (53.302,108.448,17.457)
C1': (54.677,107.199,18.900)
C5': (51.435,108.709,19.162)
O4': (53.570,107.690,19.642)
C8: (53.287,105.092,18.484)
O2': (55.648,109.102,17.803)
C6: (55.635,102.527,17.980)
C5: (54.824,103.649,18.203)
C4: (55.465,104.845,18.460)
P: (49.410,107.044,19.115)
C4': (52.909,108.738,18.889)
C2': (54.755,108.019,17.611)
C2: (57.453,103.916,18.298)
N1: (56.974,102.694,18.036)
N3: (56.791,105.051,18.522)
N6: (55.160,101.314,17.718)
N7: (53.449,103.817,18.225)
N9: (54.470,105.776,18.632)
O5': (50.851,107.507,18.630)
O3': (53.112,109.575,16.615)
OP2: (49.155,105.715,18.512)
C3': (53.302,108.448,17.457)
C1': (54.677,107.199,18.900)
C5': (51.435,108.709,19.162)
O4': (53.570,107.690,19.642)
C8: (53.287,105.092,18.484)
O2': (55.648,109.102,17.803)
C6: (55.635,102.527,17.980)
C5: (54.824,103.649,18.203)
C4: (55.465,104.845,18.460)
P: (49.410,107.044,19.115)
C4': (52.909,108.738,18.889)
C2': (54.755,108.019,17.611)
C2: (57.453,103.916,18.298)
N1: (56.974,102.694,18.036)
N3: (56.791,105.051,18.522)
N6: (55.160,101.314,17.718)
N7: (53.449,103.817,18.225)
N9: (54.470,105.776,18.632)
O5': (50.851,107.507,18.630)
O3': (53.112,109.575,16.615)
C4: (54.751,102.418,21.464)
N3: (55.085,103.525,22.210)
OP1: (47.096,102.295,20.138)
OP2: (49.361,101.128,19.670)
C2: (54.231,104.476,22.705)
C1': (51.915,105.235,22.921)
C3': (50.393,105.887,21.242)
O5': (49.242,103.244,21.006)
O4': (50.690,104.557,23.134)
C5': (48.632,104.181,21.910)
P: (48.470,101.920,20.577)
C4': (49.643,105.197,22.361)
C2': (51.632,106.396,21.963)
O2': (51.354,107.552,22.727)
N1: (52.892,104.260,22.422)
O4: (55.640,101.668,21.067)
O2: (54.635,105.439,23.339)
C6: (52.493,103.159,21.701)
C5: (53.356,102.259,21.222)
O3': (49.587,106.920,20.704)
N3: (55.085,103.525,22.210)
OP1: (47.096,102.295,20.138)
OP2: (49.361,101.128,19.670)
C2: (54.231,104.476,22.705)
C1': (51.915,105.235,22.921)
C3': (50.393,105.887,21.242)
O5': (49.242,103.244,21.006)
O4': (50.690,104.557,23.134)
C5': (48.632,104.181,21.910)
P: (48.470,101.920,20.577)
C4': (49.643,105.197,22.361)
C2': (51.632,106.396,21.963)
O2': (51.354,107.552,22.727)
N1: (52.892,104.260,22.422)
O4: (55.640,101.668,21.067)
O2: (54.635,105.439,23.339)
C6: (52.493,103.159,21.701)
C5: (53.356,102.259,21.222)
O3': (49.587,106.920,20.704)
Image (generated by PyMOL):