Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01140:01139
Extra
PDB:
ATOM 1 O3' U A1139 77.562 68.386 174.245 1.00140.65 O
ATOM 2 P A A1140 76.095 68.084 173.650 1.00140.61 P
ATOM 3 OP1 A A1140 76.210 66.824 172.867 1.00140.79 O
ATOM 4 OP2 A A1140 75.577 69.311 172.988 1.00140.50 O
ATOM 5 O5' A A1140 75.185 67.809 174.934 1.00139.93 O
ATOM 6 C5' A A1140 75.341 66.602 175.717 1.00138.56 C
ATOM 7 C4' A A1140 74.901 66.832 177.150 1.00136.93 C
ATOM 8 O4' A A1140 75.547 68.039 177.643 1.00136.76 O
ATOM 9 C3' A A1140 73.421 67.093 177.395 1.00135.67 C
ATOM 10 O3' A A1140 72.644 65.898 177.472 1.00134.05 O
ATOM 11 C2' A A1140 73.457 67.834 178.724 1.00135.76 C
ATOM 12 O2' A A1140 73.708 66.983 179.827 1.00135.59 O
ATOM 13 C1' A A1140 74.668 68.737 178.512 1.00135.68 C
ATOM 14 N9 A A1140 74.301 70.005 177.875 1.00135.29 N
ATOM 15 C8 A A1140 74.406 70.351 176.546 1.00134.97 C
ATOM 16 N7 A A1140 73.974 71.559 176.278 1.00134.73 N
ATOM 17 C5 A A1140 73.558 72.045 177.510 1.00134.91 C
ATOM 18 C6 A A1140 72.994 73.273 177.902 1.00134.67 C
ATOM 19 N6 A A1140 72.730 74.273 177.057 1.00134.05 N
ATOM 20 N1 A A1140 72.702 73.438 179.210 1.00134.47 N
ATOM 21 C2 A A1140 72.955 72.431 180.057 1.00134.70 C
ATOM 22 N3 A A1140 73.473 71.232 179.811 1.00134.61 N
ATOM 23 C4 A A1140 73.758 71.100 178.503 1.00135.02 C
ATOM 24 P C A1141 71.075 65.939 177.098 1.00132.27 P
ATOM 25 OP1 C A1141 70.398 64.849 177.847 1.00132.28 O
ATOM 26 OP2 C A1141 70.936 66.009 175.619 1.00131.91 O
ATOM 27 O5' C A1141 70.566 67.325 177.695 1.00130.91 O
TER
ATOM 1 O3' C B1138 80.975 72.960 171.696 1.00143.27 O
ATOM 2 P U B1139 79.578 72.223 171.383 1.00143.63 P
ATOM 3 OP1 U B1139 79.844 71.128 170.408 1.00143.23 O
ATOM 4 OP2 U B1139 78.580 73.275 171.050 1.00143.63 O
ATOM 5 O5' U B1139 79.164 71.567 172.777 1.00142.61 O
ATOM 6 C5' U B1139 79.885 70.436 173.292 1.00141.89 C
ATOM 7 C4' U B1139 79.347 70.017 174.643 1.00141.50 C
ATOM 8 O4' U B1139 79.515 71.090 175.608 1.00141.19 O
ATOM 9 C3' U B1139 77.869 69.682 174.757 1.00141.00 C
ATOM 10 O3' U B1139 77.562 68.386 174.245 1.00140.65 O
ATOM 11 C2' U B1139 77.666 69.747 176.266 1.00140.84 C
ATOM 12 O2' U B1139 78.162 68.597 176.925 1.00140.48 O
ATOM 13 C1' U B1139 78.546 70.945 176.637 1.00140.72 C
ATOM 14 N1 U B1139 77.800 72.207 176.788 1.00140.51 N
ATOM 15 C2 U B1139 77.467 72.603 178.076 1.00140.56 C
ATOM 16 O2 U B1139 77.761 71.961 179.067 1.00141.45 O
ATOM 17 N3 U B1139 76.776 73.783 178.162 1.00140.11 N
ATOM 18 C4 U B1139 76.385 74.591 177.123 1.00140.10 C
ATOM 19 O4 U B1139 75.774 75.631 177.369 1.00140.29 O
ATOM 20 C5 U B1139 76.758 74.119 175.823 1.00139.96 C
ATOM 21 C6 U B1139 77.437 72.973 175.702 1.00140.19 C
ATOM 22 P A B1140 76.095 68.084 173.650 1.00140.61 P
ATOM 23 OP1 A B1140 76.210 66.824 172.867 1.00140.79 O
ATOM 24 OP2 A B1140 75.577 69.311 172.988 1.00140.50 O
ATOM 25 O5' A B1140 75.185 67.809 174.934 1.00139.93 O
TER
ATOM 2 P A A1140 76.095 68.084 173.650 1.00140.61 P
ATOM 3 OP1 A A1140 76.210 66.824 172.867 1.00140.79 O
ATOM 4 OP2 A A1140 75.577 69.311 172.988 1.00140.50 O
ATOM 5 O5' A A1140 75.185 67.809 174.934 1.00139.93 O
ATOM 6 C5' A A1140 75.341 66.602 175.717 1.00138.56 C
ATOM 7 C4' A A1140 74.901 66.832 177.150 1.00136.93 C
ATOM 8 O4' A A1140 75.547 68.039 177.643 1.00136.76 O
ATOM 9 C3' A A1140 73.421 67.093 177.395 1.00135.67 C
ATOM 10 O3' A A1140 72.644 65.898 177.472 1.00134.05 O
ATOM 11 C2' A A1140 73.457 67.834 178.724 1.00135.76 C
ATOM 12 O2' A A1140 73.708 66.983 179.827 1.00135.59 O
ATOM 13 C1' A A1140 74.668 68.737 178.512 1.00135.68 C
ATOM 14 N9 A A1140 74.301 70.005 177.875 1.00135.29 N
ATOM 15 C8 A A1140 74.406 70.351 176.546 1.00134.97 C
ATOM 16 N7 A A1140 73.974 71.559 176.278 1.00134.73 N
ATOM 17 C5 A A1140 73.558 72.045 177.510 1.00134.91 C
ATOM 18 C6 A A1140 72.994 73.273 177.902 1.00134.67 C
ATOM 19 N6 A A1140 72.730 74.273 177.057 1.00134.05 N
ATOM 20 N1 A A1140 72.702 73.438 179.210 1.00134.47 N
ATOM 21 C2 A A1140 72.955 72.431 180.057 1.00134.70 C
ATOM 22 N3 A A1140 73.473 71.232 179.811 1.00134.61 N
ATOM 23 C4 A A1140 73.758 71.100 178.503 1.00135.02 C
ATOM 24 P C A1141 71.075 65.939 177.098 1.00132.27 P
ATOM 25 OP1 C A1141 70.398 64.849 177.847 1.00132.28 O
ATOM 26 OP2 C A1141 70.936 66.009 175.619 1.00131.91 O
ATOM 27 O5' C A1141 70.566 67.325 177.695 1.00130.91 O
TER
ATOM 1 O3' C B1138 80.975 72.960 171.696 1.00143.27 O
ATOM 2 P U B1139 79.578 72.223 171.383 1.00143.63 P
ATOM 3 OP1 U B1139 79.844 71.128 170.408 1.00143.23 O
ATOM 4 OP2 U B1139 78.580 73.275 171.050 1.00143.63 O
ATOM 5 O5' U B1139 79.164 71.567 172.777 1.00142.61 O
ATOM 6 C5' U B1139 79.885 70.436 173.292 1.00141.89 C
ATOM 7 C4' U B1139 79.347 70.017 174.643 1.00141.50 C
ATOM 8 O4' U B1139 79.515 71.090 175.608 1.00141.19 O
ATOM 9 C3' U B1139 77.869 69.682 174.757 1.00141.00 C
ATOM 10 O3' U B1139 77.562 68.386 174.245 1.00140.65 O
ATOM 11 C2' U B1139 77.666 69.747 176.266 1.00140.84 C
ATOM 12 O2' U B1139 78.162 68.597 176.925 1.00140.48 O
ATOM 13 C1' U B1139 78.546 70.945 176.637 1.00140.72 C
ATOM 14 N1 U B1139 77.800 72.207 176.788 1.00140.51 N
ATOM 15 C2 U B1139 77.467 72.603 178.076 1.00140.56 C
ATOM 16 O2 U B1139 77.761 71.961 179.067 1.00141.45 O
ATOM 17 N3 U B1139 76.776 73.783 178.162 1.00140.11 N
ATOM 18 C4 U B1139 76.385 74.591 177.123 1.00140.10 C
ATOM 19 O4 U B1139 75.774 75.631 177.369 1.00140.29 O
ATOM 20 C5 U B1139 76.758 74.119 175.823 1.00139.96 C
ATOM 21 C6 U B1139 77.437 72.973 175.702 1.00140.19 C
ATOM 22 P A B1140 76.095 68.084 173.650 1.00140.61 P
ATOM 23 OP1 A B1140 76.210 66.824 172.867 1.00140.79 O
ATOM 24 OP2 A B1140 75.577 69.311 172.988 1.00140.50 O
ATOM 25 O5' A B1140 75.185 67.809 174.934 1.00139.93 O
TER
Atoms:
OP1: (76.210,66.824,172.867)
OP2: (75.577,69.311,172.988)
C3': (73.421,67.093,177.395)
C1': (74.668,68.737,178.512)
C5': (75.341,66.602,175.717)
O4': (75.547,68.039,177.643)
C8: (74.406,70.351,176.546)
O2': (73.708,66.983,179.827)
C6: (72.994,73.273,177.902)
C5: (73.558,72.045,177.510)
C4: (73.758,71.100,178.503)
P: (76.095,68.084,173.650)
C4': (74.901,66.832,177.150)
C2': (73.457,67.834,178.724)
C2: (72.955,72.431,180.057)
N1: (72.702,73.438,179.210)
N3: (73.473,71.232,179.811)
N6: (72.730,74.273,177.057)
N7: (73.974,71.559,176.278)
N9: (74.301,70.005,177.875)
O5': (75.185,67.809,174.934)
O3': (72.644,65.898,177.472)
OP2: (75.577,69.311,172.988)
C3': (73.421,67.093,177.395)
C1': (74.668,68.737,178.512)
C5': (75.341,66.602,175.717)
O4': (75.547,68.039,177.643)
C8: (74.406,70.351,176.546)
O2': (73.708,66.983,179.827)
C6: (72.994,73.273,177.902)
C5: (73.558,72.045,177.510)
C4: (73.758,71.100,178.503)
P: (76.095,68.084,173.650)
C4': (74.901,66.832,177.150)
C2': (73.457,67.834,178.724)
C2: (72.955,72.431,180.057)
N1: (72.702,73.438,179.210)
N3: (73.473,71.232,179.811)
N6: (72.730,74.273,177.057)
N7: (73.974,71.559,176.278)
N9: (74.301,70.005,177.875)
O5': (75.185,67.809,174.934)
O3': (72.644,65.898,177.472)
C4: (76.385,74.591,177.123)
N3: (76.776,73.783,178.162)
OP1: (79.844,71.128,170.408)
OP2: (78.580,73.275,171.050)
C2: (77.467,72.603,178.076)
C1': (78.546,70.945,176.637)
C3': (77.869,69.682,174.757)
O5': (79.164,71.567,172.777)
O4': (79.515,71.090,175.608)
C5': (79.885,70.436,173.292)
P: (79.578,72.223,171.383)
C4': (79.347,70.017,174.643)
C2': (77.666,69.747,176.266)
O2': (78.162,68.597,176.925)
N1: (77.800,72.207,176.788)
O4: (75.774,75.631,177.369)
O2: (77.761,71.961,179.067)
C6: (77.437,72.973,175.702)
C5: (76.758,74.119,175.823)
O3': (77.562,68.386,174.245)
N3: (76.776,73.783,178.162)
OP1: (79.844,71.128,170.408)
OP2: (78.580,73.275,171.050)
C2: (77.467,72.603,178.076)
C1': (78.546,70.945,176.637)
C3': (77.869,69.682,174.757)
O5': (79.164,71.567,172.777)
O4': (79.515,71.090,175.608)
C5': (79.885,70.436,173.292)
P: (79.578,72.223,171.383)
C4': (79.347,70.017,174.643)
C2': (77.666,69.747,176.266)
O2': (78.162,68.597,176.925)
N1: (77.800,72.207,176.788)
O4: (75.774,75.631,177.369)
O2: (77.761,71.961,179.067)
C6: (77.437,72.973,175.702)
C5: (76.758,74.119,175.823)
O3': (77.562,68.386,174.245)
Image (generated by PyMOL):