Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11581:11580
Extra
PDB:
ATOM 1 O3' U A1580 -8.505 35.531 163.259 1.00 80.76 O
ATOM 2 P A A1581 -6.991 35.277 162.822 1.00 78.18 P
ATOM 3 OP1 A A1581 -6.550 34.009 163.495 1.00 78.09 O
ATOM 4 OP2 A A1581 -6.244 36.521 163.097 1.00 78.63 O
ATOM 5 O5' A A1581 -7.120 35.064 161.238 1.00 77.20 O
ATOM 6 C5' A A1581 -8.037 34.117 160.697 1.00 76.73 C
ATOM 7 C4' A A1581 -8.382 34.424 159.257 1.00 76.07 C
ATOM 8 O4' A A1581 -8.979 35.725 159.157 1.00 76.54 O
ATOM 9 C3' A A1581 -7.225 34.487 158.304 1.00 75.34 C
ATOM 10 O3' A A1581 -6.838 33.220 157.872 1.00 74.63 O
ATOM 11 C2' A A1581 -7.733 35.371 157.176 1.00 75.08 C
ATOM 12 O2' A A1581 -8.466 34.598 156.256 1.00 74.45 O
ATOM 13 C1' A A1581 -8.710 36.283 157.896 1.00 75.96 C
ATOM 14 N9 A A1581 -8.235 37.659 158.107 1.00 76.46 N
ATOM 15 C8 A A1581 -7.487 38.099 159.161 1.00 77.07 C
ATOM 16 N7 A A1581 -7.316 39.395 159.183 1.00 77.51 N
ATOM 17 C5 A A1581 -8.048 39.867 158.105 1.00 77.19 C
ATOM 18 C6 A A1581 -8.294 41.172 157.602 1.00 77.42 C
ATOM 19 N6 A A1581 -7.808 42.306 158.113 1.00 78.04 N
ATOM 20 N1 A A1581 -9.074 41.271 156.507 1.00 76.99 N
ATOM 21 C2 A A1581 -9.566 40.147 155.974 1.00 76.38 C
ATOM 22 N3 A A1581 -9.416 38.879 156.364 1.00 76.12 N
ATOM 23 C4 A A1581 -8.636 38.798 157.448 1.00 76.55 C
ATOM 24 P A A1582 -5.322 32.969 157.510 1.00 74.98 P
ATOM 25 OP1 A A1582 -5.136 31.503 157.408 1.00 74.45 O
ATOM 26 OP2 A A1582 -4.518 33.732 158.497 1.00 75.65 O
ATOM 27 O5' A A1582 -5.205 33.636 156.071 1.00 74.37 O
TER
ATOM 1 O3' G B1579 -6.777 41.534 163.698 1.00 90.44 O
ATOM 2 P U B1580 -7.935 40.866 164.618 1.00 83.33 P
ATOM 3 OP1 U B1580 -9.197 41.621 164.375 1.00 83.68 O
ATOM 4 OP2 U B1580 -7.407 40.794 165.999 1.00 84.05 O
ATOM 5 O5' U B1580 -8.067 39.396 164.024 1.00 82.46 O
ATOM 6 C5' U B1580 -8.528 38.326 164.841 1.00 82.66 C
ATOM 7 C4' U B1580 -9.590 37.501 164.152 1.00 82.15 C
ATOM 8 O4' U B1580 -10.659 38.351 163.678 1.00 82.36 O
ATOM 9 C3' U B1580 -9.148 36.740 162.922 1.00 81.08 C
ATOM 10 O3' U B1580 -8.505 35.531 163.259 1.00 80.76 O
ATOM 11 C2' U B1580 -10.457 36.543 162.147 1.00 80.80 C
ATOM 12 O2' U B1580 -11.186 35.430 162.652 1.00 80.86 O
ATOM 13 C1' U B1580 -11.232 37.799 162.515 1.00 81.59 C
ATOM 14 N1 U B1580 -11.245 38.821 161.460 1.00 81.32 N
ATOM 15 C2 U B1580 -12.111 38.656 160.427 1.00 80.84 C
ATOM 16 O2 U B1580 -12.788 37.661 160.308 1.00 80.56 O
ATOM 17 N3 U B1580 -12.144 39.668 159.527 1.00 80.68 N
ATOM 18 C4 U B1580 -11.417 40.819 159.591 1.00 80.99 C
ATOM 19 O4 U B1580 -11.527 41.655 158.706 1.00 80.81 O
ATOM 20 C5 U B1580 -10.554 40.926 160.706 1.00 81.51 C
ATOM 21 C6 U B1580 -10.514 39.951 161.592 1.00 81.66 C
ATOM 22 P A B1581 -6.991 35.277 162.822 1.00 78.18 P
ATOM 23 OP1 A B1581 -6.550 34.009 163.495 1.00 78.09 O
ATOM 24 OP2 A B1581 -6.244 36.521 163.097 1.00 78.63 O
ATOM 25 O5' A B1581 -7.120 35.064 161.238 1.00 77.20 O
TER
ATOM 2 P A A1581 -6.991 35.277 162.822 1.00 78.18 P
ATOM 3 OP1 A A1581 -6.550 34.009 163.495 1.00 78.09 O
ATOM 4 OP2 A A1581 -6.244 36.521 163.097 1.00 78.63 O
ATOM 5 O5' A A1581 -7.120 35.064 161.238 1.00 77.20 O
ATOM 6 C5' A A1581 -8.037 34.117 160.697 1.00 76.73 C
ATOM 7 C4' A A1581 -8.382 34.424 159.257 1.00 76.07 C
ATOM 8 O4' A A1581 -8.979 35.725 159.157 1.00 76.54 O
ATOM 9 C3' A A1581 -7.225 34.487 158.304 1.00 75.34 C
ATOM 10 O3' A A1581 -6.838 33.220 157.872 1.00 74.63 O
ATOM 11 C2' A A1581 -7.733 35.371 157.176 1.00 75.08 C
ATOM 12 O2' A A1581 -8.466 34.598 156.256 1.00 74.45 O
ATOM 13 C1' A A1581 -8.710 36.283 157.896 1.00 75.96 C
ATOM 14 N9 A A1581 -8.235 37.659 158.107 1.00 76.46 N
ATOM 15 C8 A A1581 -7.487 38.099 159.161 1.00 77.07 C
ATOM 16 N7 A A1581 -7.316 39.395 159.183 1.00 77.51 N
ATOM 17 C5 A A1581 -8.048 39.867 158.105 1.00 77.19 C
ATOM 18 C6 A A1581 -8.294 41.172 157.602 1.00 77.42 C
ATOM 19 N6 A A1581 -7.808 42.306 158.113 1.00 78.04 N
ATOM 20 N1 A A1581 -9.074 41.271 156.507 1.00 76.99 N
ATOM 21 C2 A A1581 -9.566 40.147 155.974 1.00 76.38 C
ATOM 22 N3 A A1581 -9.416 38.879 156.364 1.00 76.12 N
ATOM 23 C4 A A1581 -8.636 38.798 157.448 1.00 76.55 C
ATOM 24 P A A1582 -5.322 32.969 157.510 1.00 74.98 P
ATOM 25 OP1 A A1582 -5.136 31.503 157.408 1.00 74.45 O
ATOM 26 OP2 A A1582 -4.518 33.732 158.497 1.00 75.65 O
ATOM 27 O5' A A1582 -5.205 33.636 156.071 1.00 74.37 O
TER
ATOM 1 O3' G B1579 -6.777 41.534 163.698 1.00 90.44 O
ATOM 2 P U B1580 -7.935 40.866 164.618 1.00 83.33 P
ATOM 3 OP1 U B1580 -9.197 41.621 164.375 1.00 83.68 O
ATOM 4 OP2 U B1580 -7.407 40.794 165.999 1.00 84.05 O
ATOM 5 O5' U B1580 -8.067 39.396 164.024 1.00 82.46 O
ATOM 6 C5' U B1580 -8.528 38.326 164.841 1.00 82.66 C
ATOM 7 C4' U B1580 -9.590 37.501 164.152 1.00 82.15 C
ATOM 8 O4' U B1580 -10.659 38.351 163.678 1.00 82.36 O
ATOM 9 C3' U B1580 -9.148 36.740 162.922 1.00 81.08 C
ATOM 10 O3' U B1580 -8.505 35.531 163.259 1.00 80.76 O
ATOM 11 C2' U B1580 -10.457 36.543 162.147 1.00 80.80 C
ATOM 12 O2' U B1580 -11.186 35.430 162.652 1.00 80.86 O
ATOM 13 C1' U B1580 -11.232 37.799 162.515 1.00 81.59 C
ATOM 14 N1 U B1580 -11.245 38.821 161.460 1.00 81.32 N
ATOM 15 C2 U B1580 -12.111 38.656 160.427 1.00 80.84 C
ATOM 16 O2 U B1580 -12.788 37.661 160.308 1.00 80.56 O
ATOM 17 N3 U B1580 -12.144 39.668 159.527 1.00 80.68 N
ATOM 18 C4 U B1580 -11.417 40.819 159.591 1.00 80.99 C
ATOM 19 O4 U B1580 -11.527 41.655 158.706 1.00 80.81 O
ATOM 20 C5 U B1580 -10.554 40.926 160.706 1.00 81.51 C
ATOM 21 C6 U B1580 -10.514 39.951 161.592 1.00 81.66 C
ATOM 22 P A B1581 -6.991 35.277 162.822 1.00 78.18 P
ATOM 23 OP1 A B1581 -6.550 34.009 163.495 1.00 78.09 O
ATOM 24 OP2 A B1581 -6.244 36.521 163.097 1.00 78.63 O
ATOM 25 O5' A B1581 -7.120 35.064 161.238 1.00 77.20 O
TER
Atoms:
OP1: (-6.550,34.009,163.495)
OP2: (-6.244,36.521,163.097)
C3': (-7.225,34.487,158.304)
C1': (-8.710,36.283,157.896)
C5': (-8.037,34.117,160.697)
O4': (-8.979,35.725,159.157)
C8: (-7.487,38.099,159.161)
O2': (-8.466,34.598,156.256)
C6: (-8.294,41.172,157.602)
C5: (-8.048,39.867,158.105)
C4: (-8.636,38.798,157.448)
P: (-6.991,35.277,162.822)
C4': (-8.382,34.424,159.257)
C2': (-7.733,35.371,157.176)
C2: (-9.566,40.147,155.974)
N1: (-9.074,41.271,156.507)
N3: (-9.416,38.879,156.364)
N6: (-7.808,42.306,158.113)
N7: (-7.316,39.395,159.183)
N9: (-8.235,37.659,158.107)
O5': (-7.120,35.064,161.238)
O3': (-6.838,33.220,157.872)
OP2: (-6.244,36.521,163.097)
C3': (-7.225,34.487,158.304)
C1': (-8.710,36.283,157.896)
C5': (-8.037,34.117,160.697)
O4': (-8.979,35.725,159.157)
C8: (-7.487,38.099,159.161)
O2': (-8.466,34.598,156.256)
C6: (-8.294,41.172,157.602)
C5: (-8.048,39.867,158.105)
C4: (-8.636,38.798,157.448)
P: (-6.991,35.277,162.822)
C4': (-8.382,34.424,159.257)
C2': (-7.733,35.371,157.176)
C2: (-9.566,40.147,155.974)
N1: (-9.074,41.271,156.507)
N3: (-9.416,38.879,156.364)
N6: (-7.808,42.306,158.113)
N7: (-7.316,39.395,159.183)
N9: (-8.235,37.659,158.107)
O5': (-7.120,35.064,161.238)
O3': (-6.838,33.220,157.872)
C4: (-11.417,40.819,159.591)
N3: (-12.144,39.668,159.527)
OP1: (-9.197,41.621,164.375)
OP2: (-7.407,40.794,165.999)
C2: (-12.111,38.656,160.427)
C1': (-11.232,37.799,162.515)
C3': (-9.148,36.740,162.922)
O5': (-8.067,39.396,164.024)
O4': (-10.659,38.351,163.678)
C5': (-8.528,38.326,164.841)
P: (-7.935,40.866,164.618)
C4': (-9.590,37.501,164.152)
C2': (-10.457,36.543,162.147)
O2': (-11.186,35.430,162.652)
N1: (-11.245,38.821,161.460)
O4: (-11.527,41.655,158.706)
O2: (-12.788,37.661,160.308)
C6: (-10.514,39.951,161.592)
C5: (-10.554,40.926,160.706)
O3': (-8.505,35.531,163.259)
N3: (-12.144,39.668,159.527)
OP1: (-9.197,41.621,164.375)
OP2: (-7.407,40.794,165.999)
C2: (-12.111,38.656,160.427)
C1': (-11.232,37.799,162.515)
C3': (-9.148,36.740,162.922)
O5': (-8.067,39.396,164.024)
O4': (-10.659,38.351,163.678)
C5': (-8.528,38.326,164.841)
P: (-7.935,40.866,164.618)
C4': (-9.590,37.501,164.152)
C2': (-10.457,36.543,162.147)
O2': (-11.186,35.430,162.652)
N1: (-11.245,38.821,161.460)
O4: (-11.527,41.655,158.706)
O2: (-12.788,37.661,160.308)
C6: (-10.514,39.951,161.592)
C5: (-10.554,40.926,160.706)
O3': (-8.505,35.531,163.259)
Image (generated by PyMOL):