ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1B23:R15:R56

Extra

PDB:
ATOM 1 O3' G A 14 16.864 54.020 5.967 1.00 69.63 O
ATOM 2 P C A 15 16.294 53.458 7.352 1.00 65.37 P
ATOM 3 OP1 C A 15 16.484 54.523 8.367 1.00 68.60 O
ATOM 4 OP2 C A 15 16.897 52.117 7.568 1.00 65.49 O
ATOM 5 O5' C A 15 14.736 53.292 7.070 1.00 59.46 O
ATOM 6 C5' C A 15 13.944 54.433 6.711 1.00 54.89 C
ATOM 7 C4' C A 15 12.648 54.003 6.069 1.00 54.12 C
ATOM 8 O4' C A 15 12.919 53.267 4.848 1.00 50.80 O
ATOM 9 C3' C A 15 11.762 53.067 6.870 1.00 54.53 C
ATOM 10 O3' C A 15 10.966 53.752 7.821 1.00 63.40 O
ATOM 11 C2' C A 15 10.903 52.427 5.788 1.00 49.57 C
ATOM 12 O2' C A 15 9.830 53.264 5.404 1.00 41.03 O
ATOM 13 C1' C A 15 11.898 52.306 4.637 1.00 46.68 C
ATOM 14 N1 C A 15 12.510 50.970 4.579 1.00 46.90 N
ATOM 15 C2 C A 15 11.751 49.911 4.066 1.00 46.87 C
ATOM 16 O2 C A 15 10.602 50.141 3.655 1.00 46.08 O
ATOM 17 N3 C A 15 12.292 48.669 4.022 1.00 47.37 N
ATOM 18 C4 C A 15 13.536 48.467 4.469 1.00 47.99 C
ATOM 19 N4 C A 15 14.029 47.222 4.411 1.00 47.67 N
ATOM 20 C5 C A 15 14.334 49.531 4.991 1.00 47.36 C
ATOM 21 C6 C A 15 13.784 50.754 5.029 1.00 47.12 C
ATOM 22 P G A 16 10.295 52.924 9.024 1.00 67.14 P
ATOM 23 OP1 G A 16 9.562 53.897 9.878 1.00 63.78 O
ATOM 24 OP2 G A 16 11.353 52.057 9.622 1.00 59.90 O
ATOM 25 O5' G A 16 9.231 51.992 8.290 1.00 63.30 O
TER

ATOM 1 O3' A B 55 5.615 42.594 4.702 1.00 51.87 O
ATOM 2 P C B 56 5.846 42.398 3.128 1.00 46.35 P
ATOM 3 OP1 C B 56 5.523 43.687 2.465 1.00 46.18 O
ATOM 4 OP2 C B 56 5.140 41.159 2.719 1.00 43.51 O
ATOM 5 O5' C B 56 7.418 42.167 2.996 1.00 41.72 O
ATOM 6 C5' C B 56 8.017 40.898 3.327 1.00 39.08 C
ATOM 7 C4' C B 56 9.456 41.097 3.744 1.00 42.68 C
ATOM 8 O4' C B 56 10.148 41.797 2.679 1.00 44.26 O
ATOM 9 C3' C B 56 9.667 41.968 4.975 1.00 42.75 C
ATOM 10 O3' C B 56 9.619 41.210 6.173 1.00 44.16 O
ATOM 11 C2' C B 56 11.053 42.544 4.738 1.00 44.09 C
ATOM 12 O2' C B 56 12.077 41.626 5.057 1.00 45.84 O
ATOM 13 C1' C B 56 11.032 42.759 3.228 1.00 44.13 C
ATOM 14 N1 C B 56 10.486 44.085 2.918 1.00 44.68 N
ATOM 15 C2 C B 56 11.313 45.211 3.036 1.00 44.87 C
ATOM 16 O2 C B 56 12.496 45.061 3.387 1.00 44.41 O
ATOM 17 N3 C B 56 10.798 46.434 2.775 1.00 44.21 N
ATOM 18 C4 C B 56 9.520 46.553 2.405 1.00 44.65 C
ATOM 19 N4 C B 56 9.049 47.779 2.169 1.00 45.35 N
ATOM 20 C5 C B 56 8.664 45.422 2.265 1.00 44.66 C
ATOM 21 C6 C B 56 9.184 44.221 2.525 1.00 43.74 C
ATOM 22 P U B 57 8.876 41.809 7.462 1.00 43.30 P
ATOM 23 OP1 U B 57 9.013 40.795 8.538 1.00 44.51 O
ATOM 24 OP2 U B 57 7.527 42.270 7.052 1.00 37.26 O
ATOM 25 O5' U B 57 9.730 43.096 7.848 1.00 45.32 O
TER

Atoms:
C2: (11.751,49.911,4.066)
OP1: (16.484,54.523,8.367)
OP2: (16.897,52.117,7.568)
C4: (13.536,48.467,4.469)
O5': (14.736,53.292,7.070)
C3': (11.762,53.067,6.870)
C1': (11.898,52.306,4.637)
O4': (12.919,53.267,4.848)
C5': (13.944,54.433,6.711)
P: (16.294,53.458,7.352)
O2: (10.602,50.141,3.655)
C4': (12.648,54.003,6.069)
C2': (10.903,52.427,5.788)
O2': (9.830,53.264,5.404)
N1: (12.510,50.970,4.579)
N3: (12.292,48.669,4.022)
N4: (14.029,47.222,4.411)
C6: (13.784,50.754,5.029)
C5: (14.334,49.531,4.991)
O3': (10.966,53.752,7.821)
C2: (11.313,45.211,3.036)
OP1: (5.523,43.687,2.465)
OP2: (5.140,41.159,2.719)
C4: (9.520,46.553,2.405)
O5': (7.418,42.167,2.996)
C3': (9.667,41.968,4.975)
C1': (11.032,42.759,3.228)
O4': (10.148,41.797,2.679)
C5': (8.017,40.898,3.327)
P: (5.846,42.398,3.128)
O2: (12.496,45.061,3.387)
C4': (9.456,41.097,3.744)
C2': (11.053,42.544,4.738)
O2': (12.077,41.626,5.057)
N1: (10.486,44.085,2.918)
N3: (10.798,46.434,2.775)
N4: (9.049,47.779,2.169)
C6: (9.184,44.221,2.525)
C5: (8.664,45.422,2.265)
O3': (9.619,41.210,6.173)
Image (generated by PyMOL):
PyMOL image
show in jmol