ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1706:A2491

Extra

PDB:
ATOM 1 O3' C A1705 60.677 -46.449 -11.069 1.00 46.75 O
ATOM 2 P C A1706 61.840 -45.349 -11.033 1.00 44.05 P
ATOM 3 OP1 C A1706 61.245 -44.036 -10.719 1.00 37.02 O
ATOM 4 OP2 C A1706 62.627 -45.525 -12.279 1.00 36.48 O
ATOM 5 O5' C A1706 62.766 -45.812 -9.820 1.00 35.30 O
ATOM 6 C5' C A1706 62.249 -46.521 -8.700 1.00 38.77 C
ATOM 7 C4' C A1706 63.184 -46.347 -7.532 1.00 41.76 C
ATOM 8 O4' C A1706 64.417 -47.097 -7.739 1.00 40.55 O
ATOM 9 C3' C A1706 63.613 -44.903 -7.400 1.00 35.92 C
ATOM 10 O3' C A1706 62.687 -44.286 -6.542 1.00 31.21 O
ATOM 11 C2' C A1706 64.994 -44.984 -6.764 1.00 39.39 C
ATOM 12 O2' C A1706 64.894 -45.074 -5.365 1.00 44.59 O
ATOM 13 C1' C A1706 65.524 -46.319 -7.303 1.00 36.80 C
ATOM 14 N1 C A1706 66.506 -46.207 -8.403 1.00 34.67 N
ATOM 15 C2 C A1706 67.851 -45.925 -8.108 1.00 33.72 C
ATOM 16 O2 C A1706 68.198 -45.768 -6.932 1.00 31.95 O
ATOM 17 N3 C A1706 68.734 -45.838 -9.119 1.00 32.30 N
ATOM 18 C4 C A1706 68.328 -46.010 -10.375 1.00 34.63 C
ATOM 19 N4 C A1706 69.232 -45.902 -11.350 1.00 34.76 N
ATOM 20 C5 C A1706 66.978 -46.295 -10.696 1.00 34.03 C
ATOM 21 C6 C A1706 66.111 -46.382 -9.693 1.00 34.44 C
ATOM 22 P A A1707 62.089 -42.862 -6.931 1.00 47.72 P
ATOM 23 OP1 A A1707 61.133 -42.478 -5.841 1.00 47.21 O
ATOM 24 OP2 A A1707 61.605 -43.002 -8.331 1.00 42.77 O
ATOM 25 O5' A A1707 63.362 -41.889 -6.917 1.00 44.12 O
TER

ATOM 1 O3' U B2490 77.428 -43.550 -5.968 1.00 63.25 O
ATOM 2 P C B2491 77.403 -42.617 -7.297 1.00 54.24 P
ATOM 3 OP1 C B2491 78.207 -41.377 -7.107 1.00 53.95 O
ATOM 4 OP2 C B2491 75.977 -42.500 -7.679 1.00 44.38 O
ATOM 5 O5' C B2491 78.042 -43.498 -8.462 1.00 40.84 O
ATOM 6 C5' C B2491 77.342 -44.629 -8.976 1.00 42.52 C
ATOM 7 C4' C B2491 77.100 -44.497 -10.473 1.00 42.98 C
ATOM 8 O4' C B2491 76.474 -45.738 -10.917 1.00 39.85 O
ATOM 9 C3' C B2491 76.137 -43.378 -10.895 1.00 42.14 C
ATOM 10 O3' C B2491 76.811 -42.203 -11.344 1.00 42.07 O
ATOM 11 C2' C B2491 75.366 -43.992 -12.050 1.00 38.32 C
ATOM 12 O2' C B2491 76.044 -43.849 -13.288 1.00 30.61 O
ATOM 13 C1' C B2491 75.266 -45.454 -11.604 1.00 41.45 C
ATOM 14 N1 C B2491 74.158 -45.642 -10.638 1.00 43.47 N
ATOM 15 C2 C B2491 72.823 -45.585 -11.076 1.00 39.34 C
ATOM 16 O2 C B2491 72.593 -45.483 -12.299 1.00 38.47 O
ATOM 17 N3 C B2491 71.824 -45.652 -10.146 1.00 36.86 N
ATOM 18 C4 C B2491 72.130 -45.779 -8.843 1.00 34.49 C
ATOM 19 N4 C B2491 71.142 -45.788 -7.941 1.00 28.74 N
ATOM 20 C5 C B2491 73.466 -45.894 -8.394 1.00 41.15 C
ATOM 21 C6 C B2491 74.437 -45.828 -9.312 1.00 43.66 C
ATOM 22 P A B2492 75.966 -40.844 -11.588 1.00 46.35 P
ATOM 23 OP1 A B2492 76.774 -39.861 -12.380 1.00 38.54 O
ATOM 24 OP2 A B2492 75.412 -40.447 -10.275 1.00 40.37 O
ATOM 25 O5' A B2492 74.714 -41.282 -12.461 1.00 48.89 O
TER

Atoms:
C2: (67.851,-45.925,-8.108)
OP1: (61.245,-44.036,-10.719)
OP2: (62.627,-45.525,-12.279)
C4: (68.328,-46.010,-10.375)
O5': (62.766,-45.812,-9.820)
C3': (63.613,-44.903,-7.400)
C1': (65.524,-46.319,-7.303)
O4': (64.417,-47.097,-7.739)
C5': (62.249,-46.521,-8.700)
P: (61.840,-45.349,-11.033)
O2: (68.198,-45.768,-6.932)
C4': (63.184,-46.347,-7.532)
C2': (64.994,-44.984,-6.764)
O2': (64.894,-45.074,-5.365)
N1: (66.506,-46.207,-8.403)
N3: (68.734,-45.838,-9.119)
N4: (69.232,-45.902,-11.350)
C6: (66.111,-46.382,-9.693)
C5: (66.978,-46.295,-10.696)
O3': (62.687,-44.286,-6.542)
C2: (72.823,-45.585,-11.076)
OP1: (78.207,-41.377,-7.107)
OP2: (75.977,-42.500,-7.679)
C4: (72.130,-45.779,-8.843)
O5': (78.042,-43.498,-8.462)
C3': (76.137,-43.378,-10.895)
C1': (75.266,-45.454,-11.604)
O4': (76.474,-45.738,-10.917)
C5': (77.342,-44.629,-8.976)
P: (77.403,-42.617,-7.297)
O2: (72.593,-45.483,-12.299)
C4': (77.100,-44.497,-10.473)
C2': (75.366,-43.992,-12.050)
O2': (76.044,-43.849,-13.288)
N1: (74.158,-45.642,-10.638)
N3: (71.824,-45.652,-10.146)
N4: (71.142,-45.788,-7.941)
C6: (74.437,-45.828,-9.312)
C5: (73.466,-45.894,-8.394)
O3': (76.811,-42.203,-11.344)
Image (generated by PyMOL):
PyMOL image
show in jmol