ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1707:A2416

Extra

PDB:
ATOM 1 O3' C A1706 61.336 -46.453 -10.939 1.00 40.40 O
ATOM 2 P C A1707 62.464 -45.407 -10.458 1.00 31.52 P
ATOM 3 OP1 C A1707 61.787 -44.215 -9.919 1.00 20.37 O
ATOM 4 OP2 C A1707 63.434 -45.245 -11.594 1.00 43.01 O
ATOM 5 O5' C A1707 63.153 -46.203 -9.287 1.00 33.15 O
ATOM 6 C5' C A1707 62.555 -46.276 -8.012 1.00 31.11 C
ATOM 7 C4' C A1707 63.593 -46.166 -6.930 1.00 32.42 C
ATOM 8 O4' C A1707 64.746 -46.985 -7.268 1.00 28.64 O
ATOM 9 C3' C A1707 64.170 -44.784 -6.707 1.00 29.06 C
ATOM 10 O3' C A1707 63.334 -43.990 -5.876 1.00 32.44 O
ATOM 11 C2' C A1707 65.513 -45.090 -6.068 1.00 31.86 C
ATOM 12 O2' C A1707 65.349 -45.313 -4.681 1.00 34.82 O
ATOM 13 C1' C A1707 65.901 -46.421 -6.721 1.00 29.82 C
ATOM 14 N1 C A1707 66.884 -46.249 -7.785 1.00 30.40 N
ATOM 15 C2 C A1707 68.234 -46.133 -7.428 1.00 33.32 C
ATOM 16 O2 C A1707 68.474 -46.179 -6.202 1.00 27.70 O
ATOM 17 N3 C A1707 69.178 -45.969 -8.407 1.00 27.77 N
ATOM 18 C4 C A1707 68.774 -45.934 -9.686 1.00 29.40 C
ATOM 19 N4 C A1707 69.646 -45.773 -10.696 1.00 30.26 N
ATOM 20 C5 C A1707 67.391 -46.063 -10.025 1.00 31.44 C
ATOM 21 C6 C A1707 66.476 -46.216 -9.064 1.00 27.19 C
ATOM 22 P A A1708 62.863 -42.516 -6.331 1.00 34.92 P
ATOM 23 OP1 A A1708 61.987 -41.990 -5.256 1.00 41.83 O
ATOM 24 OP2 A A1708 62.303 -42.638 -7.704 1.00 36.00 O
ATOM 25 O5' A A1708 64.243 -41.700 -6.353 1.00 40.84 O
TER

ATOM 1 O3' U B2415 79.440 -44.361 -6.523 1.00 59.82 O
ATOM 2 P C B2416 78.013 -43.610 -6.604 1.00 58.41 P
ATOM 3 OP1 C B2416 78.263 -42.150 -6.604 1.00 47.69 O
ATOM 4 OP2 C B2416 77.135 -44.181 -5.548 1.00 56.40 O
ATOM 5 O5' C B2416 77.513 -44.070 -8.026 1.00 41.78 O
ATOM 6 C5' C B2416 78.444 -44.459 -9.010 1.00 35.12 C
ATOM 7 C4' C B2416 77.798 -44.519 -10.350 1.00 32.58 C
ATOM 8 O4' C B2416 77.058 -45.764 -10.462 1.00 41.85 O
ATOM 9 C3' C B2416 76.756 -43.446 -10.617 1.00 30.06 C
ATOM 10 O3' C B2416 77.317 -42.228 -11.051 1.00 33.09 O
ATOM 11 C2' C B2416 75.885 -44.115 -11.653 1.00 31.28 C
ATOM 12 O2' C B2416 76.575 -44.185 -12.889 1.00 39.00 O
ATOM 13 C1' C B2416 75.810 -45.522 -11.073 1.00 36.74 C
ATOM 14 N1 C B2416 74.770 -45.612 -10.031 1.00 32.67 N
ATOM 15 C2 C B2416 73.439 -45.533 -10.387 1.00 38.43 C
ATOM 16 O2 C B2416 73.215 -45.456 -11.608 1.00 42.64 O
ATOM 17 N3 C B2416 72.472 -45.564 -9.417 1.00 33.00 N
ATOM 18 C4 C B2416 72.823 -45.653 -8.140 1.00 28.74 C
ATOM 19 N4 C B2416 71.900 -45.689 -7.185 1.00 31.45 N
ATOM 20 C5 C B2416 74.175 -45.716 -7.767 1.00 28.40 C
ATOM 21 C6 C B2416 75.098 -45.688 -8.726 1.00 31.18 C
ATOM 22 P A B2417 76.577 -40.837 -10.729 1.00 28.44 P
ATOM 23 OP1 A B2417 77.460 -39.739 -11.192 1.00 34.88 O
ATOM 24 OP2 A B2417 76.181 -40.871 -9.315 1.00 38.64 O
ATOM 25 O5' A B2417 75.294 -40.904 -11.639 1.00 32.49 O
TER

Atoms:
C2: (68.234,-46.133,-7.428)
OP1: (61.787,-44.215,-9.919)
OP2: (63.434,-45.245,-11.594)
C4: (68.774,-45.934,-9.686)
O5': (63.153,-46.203,-9.287)
C3': (64.170,-44.784,-6.707)
C1': (65.901,-46.421,-6.721)
O4': (64.746,-46.985,-7.268)
C5': (62.555,-46.276,-8.012)
P: (62.464,-45.407,-10.458)
O2: (68.474,-46.179,-6.202)
C4': (63.593,-46.166,-6.930)
C2': (65.513,-45.090,-6.068)
O2': (65.349,-45.313,-4.681)
N1: (66.884,-46.249,-7.785)
N3: (69.178,-45.969,-8.407)
N4: (69.646,-45.773,-10.696)
C6: (66.476,-46.216,-9.064)
C5: (67.391,-46.063,-10.025)
O3': (63.334,-43.990,-5.876)
C2: (73.439,-45.533,-10.387)
OP1: (78.263,-42.150,-6.604)
OP2: (77.135,-44.181,-5.548)
C4: (72.823,-45.653,-8.140)
O5': (77.513,-44.070,-8.026)
C3': (76.756,-43.446,-10.617)
C1': (75.810,-45.522,-11.073)
O4': (77.058,-45.764,-10.462)
C5': (78.444,-44.459,-9.010)
P: (78.013,-43.610,-6.604)
O2: (73.215,-45.456,-11.608)
C4': (77.798,-44.519,-10.350)
C2': (75.885,-44.115,-11.653)
O2': (76.575,-44.185,-12.889)
N1: (74.770,-45.612,-10.031)
N3: (72.472,-45.564,-9.417)
N4: (71.900,-45.689,-7.185)
C6: (75.098,-45.688,-8.726)
C5: (74.175,-45.716,-7.767)
O3': (77.317,-42.228,-11.051)
Image (generated by PyMOL):
PyMOL image
show in jmol