Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11413:11452
Extra
PDB:
ATOM 1 O3' A A1412 49.575 54.515 90.465 1.00 70.80 O
ATOM 2 P C A1413 50.445 54.308 91.797 1.00 57.59 P
ATOM 3 OP1 C A1413 50.076 55.424 92.728 1.00 58.22 O
ATOM 4 OP2 C A1413 51.862 54.136 91.367 1.00 57.49 O
ATOM 5 O5' C A1413 49.878 52.941 92.368 1.00 57.14 O
ATOM 6 C5' C A1413 48.494 52.820 92.624 1.00 57.11 C
ATOM 7 C4' C A1413 48.143 51.451 93.084 1.00 56.66 C
ATOM 8 O4' C A1413 48.140 50.541 91.951 1.00 56.09 O
ATOM 9 C3' C A1413 49.093 50.869 94.101 1.00 56.67 C
ATOM 10 O3' C A1413 48.355 50.118 95.001 1.00 56.55 O
ATOM 11 C2' C A1413 49.955 49.925 93.298 1.00 56.17 C
ATOM 12 O2' C A1413 50.467 48.856 94.054 1.00 55.95 O
ATOM 13 C1' C A1413 48.982 49.437 92.228 1.00 55.75 C
ATOM 14 N1 C A1413 49.648 49.028 90.975 1.00 55.38 N
ATOM 15 C2 C A1413 49.407 47.808 90.362 1.00 54.81 C
ATOM 16 O2 C A1413 48.570 47.040 90.822 1.00 54.60 O
ATOM 17 N3 C A1413 50.071 47.477 89.242 1.00 54.51 N
ATOM 18 C4 C A1413 50.953 48.312 88.743 1.00 54.76 C
ATOM 19 N4 C A1413 51.596 47.947 87.651 1.00 54.46 N
ATOM 20 C5 C A1413 51.222 49.554 89.342 1.00 55.33 C
ATOM 21 C6 C A1413 50.561 49.870 90.444 1.00 55.62 C
ATOM 22 P U A1414 48.090 50.690 96.433 1.00 54.51 P
ATOM 23 OP1 U A1414 47.222 49.708 97.131 1.00 54.28 O
ATOM 24 OP2 U A1414 47.613 52.100 96.259 1.00 55.01 O
ATOM 25 O5' U A1414 49.552 50.676 97.067 1.00 54.69 O
TER
ATOM 1 O3' G B1451 50.361 36.455 86.269 1.00 53.56 O
ATOM 2 P C B1452 51.698 37.248 86.583 1.00 44.81 P
ATOM 3 OP1 C B1452 52.818 36.362 86.241 1.00 44.55 O
ATOM 4 OP2 C B1452 51.565 37.732 87.928 1.00 45.16 O
ATOM 5 O5' C B1452 51.650 38.475 85.571 1.00 45.02 O
ATOM 6 C5' C B1452 50.684 39.508 85.692 1.00 45.31 C
ATOM 7 C4' C B1452 51.203 40.811 85.111 1.00 45.65 C
ATOM 8 O4' C B1452 50.101 41.748 84.955 1.00 45.89 O
ATOM 9 C3' C B1452 52.216 41.564 85.982 1.00 46.06 C
ATOM 10 O3' C B1452 53.544 41.127 85.827 1.00 45.95 O
ATOM 11 C2' C B1452 51.997 43.021 85.613 1.00 46.46 C
ATOM 12 O2' C B1452 52.628 43.336 84.380 1.00 46.41 O
ATOM 13 C1' C B1452 50.486 43.037 85.409 1.00 46.38 C
ATOM 14 N1 C B1452 49.753 43.344 86.677 1.00 46.66 N
ATOM 15 C2 C B1452 49.907 44.621 87.238 1.00 47.18 C
ATOM 16 O2 C B1452 50.651 45.457 86.686 1.00 47.40 O
ATOM 17 N3 C B1452 49.223 44.930 88.379 1.00 47.45 N
ATOM 18 C4 C B1452 48.450 44.022 88.960 1.00 47.22 C
ATOM 19 N4 C B1452 47.854 44.400 90.076 1.00 47.53 N
ATOM 20 C5 C B1452 48.276 42.726 88.425 1.00 46.70 C
ATOM 21 C6 C B1452 48.928 42.447 87.300 1.00 46.44 C
ATOM 22 P A B1453 54.415 40.802 87.120 1.00 50.32 P
ATOM 23 OP1 A B1453 55.727 40.335 86.648 1.00 50.17 O
ATOM 24 OP2 A B1453 53.616 39.904 87.959 1.00 50.14 O
ATOM 25 O5' A B1453 54.555 42.218 87.819 1.00 50.90 O
TER
ATOM 2 P C A1413 50.445 54.308 91.797 1.00 57.59 P
ATOM 3 OP1 C A1413 50.076 55.424 92.728 1.00 58.22 O
ATOM 4 OP2 C A1413 51.862 54.136 91.367 1.00 57.49 O
ATOM 5 O5' C A1413 49.878 52.941 92.368 1.00 57.14 O
ATOM 6 C5' C A1413 48.494 52.820 92.624 1.00 57.11 C
ATOM 7 C4' C A1413 48.143 51.451 93.084 1.00 56.66 C
ATOM 8 O4' C A1413 48.140 50.541 91.951 1.00 56.09 O
ATOM 9 C3' C A1413 49.093 50.869 94.101 1.00 56.67 C
ATOM 10 O3' C A1413 48.355 50.118 95.001 1.00 56.55 O
ATOM 11 C2' C A1413 49.955 49.925 93.298 1.00 56.17 C
ATOM 12 O2' C A1413 50.467 48.856 94.054 1.00 55.95 O
ATOM 13 C1' C A1413 48.982 49.437 92.228 1.00 55.75 C
ATOM 14 N1 C A1413 49.648 49.028 90.975 1.00 55.38 N
ATOM 15 C2 C A1413 49.407 47.808 90.362 1.00 54.81 C
ATOM 16 O2 C A1413 48.570 47.040 90.822 1.00 54.60 O
ATOM 17 N3 C A1413 50.071 47.477 89.242 1.00 54.51 N
ATOM 18 C4 C A1413 50.953 48.312 88.743 1.00 54.76 C
ATOM 19 N4 C A1413 51.596 47.947 87.651 1.00 54.46 N
ATOM 20 C5 C A1413 51.222 49.554 89.342 1.00 55.33 C
ATOM 21 C6 C A1413 50.561 49.870 90.444 1.00 55.62 C
ATOM 22 P U A1414 48.090 50.690 96.433 1.00 54.51 P
ATOM 23 OP1 U A1414 47.222 49.708 97.131 1.00 54.28 O
ATOM 24 OP2 U A1414 47.613 52.100 96.259 1.00 55.01 O
ATOM 25 O5' U A1414 49.552 50.676 97.067 1.00 54.69 O
TER
ATOM 1 O3' G B1451 50.361 36.455 86.269 1.00 53.56 O
ATOM 2 P C B1452 51.698 37.248 86.583 1.00 44.81 P
ATOM 3 OP1 C B1452 52.818 36.362 86.241 1.00 44.55 O
ATOM 4 OP2 C B1452 51.565 37.732 87.928 1.00 45.16 O
ATOM 5 O5' C B1452 51.650 38.475 85.571 1.00 45.02 O
ATOM 6 C5' C B1452 50.684 39.508 85.692 1.00 45.31 C
ATOM 7 C4' C B1452 51.203 40.811 85.111 1.00 45.65 C
ATOM 8 O4' C B1452 50.101 41.748 84.955 1.00 45.89 O
ATOM 9 C3' C B1452 52.216 41.564 85.982 1.00 46.06 C
ATOM 10 O3' C B1452 53.544 41.127 85.827 1.00 45.95 O
ATOM 11 C2' C B1452 51.997 43.021 85.613 1.00 46.46 C
ATOM 12 O2' C B1452 52.628 43.336 84.380 1.00 46.41 O
ATOM 13 C1' C B1452 50.486 43.037 85.409 1.00 46.38 C
ATOM 14 N1 C B1452 49.753 43.344 86.677 1.00 46.66 N
ATOM 15 C2 C B1452 49.907 44.621 87.238 1.00 47.18 C
ATOM 16 O2 C B1452 50.651 45.457 86.686 1.00 47.40 O
ATOM 17 N3 C B1452 49.223 44.930 88.379 1.00 47.45 N
ATOM 18 C4 C B1452 48.450 44.022 88.960 1.00 47.22 C
ATOM 19 N4 C B1452 47.854 44.400 90.076 1.00 47.53 N
ATOM 20 C5 C B1452 48.276 42.726 88.425 1.00 46.70 C
ATOM 21 C6 C B1452 48.928 42.447 87.300 1.00 46.44 C
ATOM 22 P A B1453 54.415 40.802 87.120 1.00 50.32 P
ATOM 23 OP1 A B1453 55.727 40.335 86.648 1.00 50.17 O
ATOM 24 OP2 A B1453 53.616 39.904 87.959 1.00 50.14 O
ATOM 25 O5' A B1453 54.555 42.218 87.819 1.00 50.90 O
TER
Atoms:
C2: (49.407,47.808,90.362)
OP1: (50.076,55.424,92.728)
OP2: (51.862,54.136,91.367)
C4: (50.953,48.312,88.743)
O5': (49.878,52.941,92.368)
C3': (49.093,50.869,94.101)
C1': (48.982,49.437,92.228)
O4': (48.140,50.541,91.951)
C5': (48.494,52.820,92.624)
P: (50.445,54.308,91.797)
O2: (48.570,47.040,90.822)
C4': (48.143,51.451,93.084)
C2': (49.955,49.925,93.298)
O2': (50.467,48.856,94.054)
N1: (49.648,49.028,90.975)
N3: (50.071,47.477,89.242)
N4: (51.596,47.947,87.651)
C6: (50.561,49.870,90.444)
C5: (51.222,49.554,89.342)
O3': (48.355,50.118,95.001)
OP1: (50.076,55.424,92.728)
OP2: (51.862,54.136,91.367)
C4: (50.953,48.312,88.743)
O5': (49.878,52.941,92.368)
C3': (49.093,50.869,94.101)
C1': (48.982,49.437,92.228)
O4': (48.140,50.541,91.951)
C5': (48.494,52.820,92.624)
P: (50.445,54.308,91.797)
O2: (48.570,47.040,90.822)
C4': (48.143,51.451,93.084)
C2': (49.955,49.925,93.298)
O2': (50.467,48.856,94.054)
N1: (49.648,49.028,90.975)
N3: (50.071,47.477,89.242)
N4: (51.596,47.947,87.651)
C6: (50.561,49.870,90.444)
C5: (51.222,49.554,89.342)
O3': (48.355,50.118,95.001)
C2: (49.907,44.621,87.238)
OP1: (52.818,36.362,86.241)
OP2: (51.565,37.732,87.928)
C4: (48.450,44.022,88.960)
O5': (51.650,38.475,85.571)
C3': (52.216,41.564,85.982)
C1': (50.486,43.037,85.409)
O4': (50.101,41.748,84.955)
C5': (50.684,39.508,85.692)
P: (51.698,37.248,86.583)
O2: (50.651,45.457,86.686)
C4': (51.203,40.811,85.111)
C2': (51.997,43.021,85.613)
O2': (52.628,43.336,84.380)
N1: (49.753,43.344,86.677)
N3: (49.223,44.930,88.379)
N4: (47.854,44.400,90.076)
C6: (48.928,42.447,87.300)
C5: (48.276,42.726,88.425)
O3': (53.544,41.127,85.827)
OP1: (52.818,36.362,86.241)
OP2: (51.565,37.732,87.928)
C4: (48.450,44.022,88.960)
O5': (51.650,38.475,85.571)
C3': (52.216,41.564,85.982)
C1': (50.486,43.037,85.409)
O4': (50.101,41.748,84.955)
C5': (50.684,39.508,85.692)
P: (51.698,37.248,86.583)
O2: (50.651,45.457,86.686)
C4': (51.203,40.811,85.111)
C2': (51.997,43.021,85.613)
O2': (52.628,43.336,84.380)
N1: (49.753,43.344,86.677)
N3: (49.223,44.930,88.379)
N4: (47.854,44.400,90.076)
C6: (48.928,42.447,87.300)
C5: (48.276,42.726,88.425)
O3': (53.544,41.127,85.827)
Image (generated by PyMOL):