Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0222:0221
Extra
PDB:
ATOM 1 O3' U A 221 49.577 106.801 20.693 1.00 49.46 O
ATOM 2 P A A 222 49.352 106.923 19.107 1.00 51.21 P
ATOM 3 OP1 A A 222 48.345 107.999 18.926 1.00 48.42 O
ATOM 4 OP2 A A 222 49.119 105.591 18.499 1.00 50.24 O
ATOM 5 O5' A A 222 50.765 107.419 18.575 1.00 50.46 O
ATOM 6 C5' A A 222 51.382 108.582 19.140 1.00 50.12 C
ATOM 7 C4' A A 222 52.854 108.578 18.850 1.00 50.06 C
ATOM 8 O4' A A 222 53.497 107.503 19.579 1.00 47.77 O
ATOM 9 C3' A A 222 53.237 108.306 17.411 1.00 50.38 C
ATOM 10 O3' A A 222 53.056 109.456 16.593 1.00 53.88 O
ATOM 11 C2' A A 222 54.689 107.857 17.558 1.00 49.51 C
ATOM 12 O2' A A 222 55.600 108.913 17.798 1.00 48.51 O
ATOM 13 C1' A A 222 54.602 107.016 18.832 1.00 48.31 C
ATOM 14 N9 A A 222 54.387 105.599 18.551 1.00 46.71 N
ATOM 15 C8 A A 222 53.194 104.934 18.393 1.00 47.08 C
ATOM 16 N7 A A 222 53.335 103.654 18.145 1.00 45.87 N
ATOM 17 C5 A A 222 54.708 103.464 18.141 1.00 43.62 C
ATOM 18 C6 A A 222 55.496 102.326 17.939 1.00 44.06 C
ATOM 19 N6 A A 222 54.990 101.116 17.704 1.00 45.88 N
ATOM 20 N1 A A 222 56.839 102.470 17.989 1.00 45.45 N
ATOM 21 C2 A A 222 57.340 103.686 18.238 1.00 45.21 C
ATOM 22 N3 A A 222 56.697 104.836 18.452 1.00 45.60 N
ATOM 23 C4 A A 222 55.368 104.652 18.388 1.00 44.59 C
ATOM 24 P C A 223 53.254 109.336 15.001 1.00 56.33 P
ATOM 25 OP1 C A 223 53.221 110.721 14.460 1.00 59.35 O
ATOM 26 OP2 C A 223 52.344 108.303 14.438 1.00 55.92 O
ATOM 27 O5' C A 223 54.748 108.814 14.892 1.00 55.66 O
TER
ATOM 1 O3' A B 220 48.163 101.065 21.892 1.00 47.74 O
ATOM 2 P U B 221 48.390 101.815 20.494 1.00 47.83 P
ATOM 3 OP1 U B 221 47.052 102.206 19.990 1.00 45.80 O
ATOM 4 OP2 U B 221 49.302 100.980 19.653 1.00 41.80 O
ATOM 5 O5' U B 221 49.163 103.136 20.925 1.00 48.14 O
ATOM 6 C5' U B 221 48.565 104.057 21.853 1.00 46.78 C
ATOM 7 C4' U B 221 49.589 105.047 22.325 1.00 48.64 C
ATOM 8 O4' U B 221 50.618 104.374 23.099 1.00 49.02 O
ATOM 9 C3' U B 221 50.360 105.739 21.218 1.00 47.55 C
ATOM 10 O3' U B 221 49.577 106.801 20.693 1.00 49.46 O
ATOM 11 C2' U B 221 51.603 106.214 21.958 1.00 47.70 C
ATOM 12 O2' U B 221 51.340 107.358 22.743 1.00 50.46 O
ATOM 13 C1' U B 221 51.858 105.035 22.904 1.00 47.94 C
ATOM 14 N1 U B 221 52.829 104.058 22.394 1.00 47.37 N
ATOM 15 C2 U B 221 54.173 104.302 22.617 1.00 47.50 C
ATOM 16 O2 U B 221 54.580 105.291 23.196 1.00 51.49 O
ATOM 17 N3 U B 221 55.024 103.343 22.131 1.00 46.10 N
ATOM 18 C4 U B 221 54.678 102.199 21.445 1.00 45.44 C
ATOM 19 O4 U B 221 55.562 101.432 21.064 1.00 46.83 O
ATOM 20 C5 U B 221 53.277 102.023 21.244 1.00 44.94 C
ATOM 21 C6 U B 221 52.420 102.933 21.715 1.00 46.76 C
ATOM 22 P A B 222 49.352 106.923 19.107 1.00 51.21 P
ATOM 23 OP1 A B 222 48.345 107.999 18.926 1.00 48.42 O
ATOM 24 OP2 A B 222 49.119 105.591 18.499 1.00 50.24 O
ATOM 25 O5' A B 222 50.765 107.419 18.575 1.00 50.46 O
TER
ATOM 2 P A A 222 49.352 106.923 19.107 1.00 51.21 P
ATOM 3 OP1 A A 222 48.345 107.999 18.926 1.00 48.42 O
ATOM 4 OP2 A A 222 49.119 105.591 18.499 1.00 50.24 O
ATOM 5 O5' A A 222 50.765 107.419 18.575 1.00 50.46 O
ATOM 6 C5' A A 222 51.382 108.582 19.140 1.00 50.12 C
ATOM 7 C4' A A 222 52.854 108.578 18.850 1.00 50.06 C
ATOM 8 O4' A A 222 53.497 107.503 19.579 1.00 47.77 O
ATOM 9 C3' A A 222 53.237 108.306 17.411 1.00 50.38 C
ATOM 10 O3' A A 222 53.056 109.456 16.593 1.00 53.88 O
ATOM 11 C2' A A 222 54.689 107.857 17.558 1.00 49.51 C
ATOM 12 O2' A A 222 55.600 108.913 17.798 1.00 48.51 O
ATOM 13 C1' A A 222 54.602 107.016 18.832 1.00 48.31 C
ATOM 14 N9 A A 222 54.387 105.599 18.551 1.00 46.71 N
ATOM 15 C8 A A 222 53.194 104.934 18.393 1.00 47.08 C
ATOM 16 N7 A A 222 53.335 103.654 18.145 1.00 45.87 N
ATOM 17 C5 A A 222 54.708 103.464 18.141 1.00 43.62 C
ATOM 18 C6 A A 222 55.496 102.326 17.939 1.00 44.06 C
ATOM 19 N6 A A 222 54.990 101.116 17.704 1.00 45.88 N
ATOM 20 N1 A A 222 56.839 102.470 17.989 1.00 45.45 N
ATOM 21 C2 A A 222 57.340 103.686 18.238 1.00 45.21 C
ATOM 22 N3 A A 222 56.697 104.836 18.452 1.00 45.60 N
ATOM 23 C4 A A 222 55.368 104.652 18.388 1.00 44.59 C
ATOM 24 P C A 223 53.254 109.336 15.001 1.00 56.33 P
ATOM 25 OP1 C A 223 53.221 110.721 14.460 1.00 59.35 O
ATOM 26 OP2 C A 223 52.344 108.303 14.438 1.00 55.92 O
ATOM 27 O5' C A 223 54.748 108.814 14.892 1.00 55.66 O
TER
ATOM 1 O3' A B 220 48.163 101.065 21.892 1.00 47.74 O
ATOM 2 P U B 221 48.390 101.815 20.494 1.00 47.83 P
ATOM 3 OP1 U B 221 47.052 102.206 19.990 1.00 45.80 O
ATOM 4 OP2 U B 221 49.302 100.980 19.653 1.00 41.80 O
ATOM 5 O5' U B 221 49.163 103.136 20.925 1.00 48.14 O
ATOM 6 C5' U B 221 48.565 104.057 21.853 1.00 46.78 C
ATOM 7 C4' U B 221 49.589 105.047 22.325 1.00 48.64 C
ATOM 8 O4' U B 221 50.618 104.374 23.099 1.00 49.02 O
ATOM 9 C3' U B 221 50.360 105.739 21.218 1.00 47.55 C
ATOM 10 O3' U B 221 49.577 106.801 20.693 1.00 49.46 O
ATOM 11 C2' U B 221 51.603 106.214 21.958 1.00 47.70 C
ATOM 12 O2' U B 221 51.340 107.358 22.743 1.00 50.46 O
ATOM 13 C1' U B 221 51.858 105.035 22.904 1.00 47.94 C
ATOM 14 N1 U B 221 52.829 104.058 22.394 1.00 47.37 N
ATOM 15 C2 U B 221 54.173 104.302 22.617 1.00 47.50 C
ATOM 16 O2 U B 221 54.580 105.291 23.196 1.00 51.49 O
ATOM 17 N3 U B 221 55.024 103.343 22.131 1.00 46.10 N
ATOM 18 C4 U B 221 54.678 102.199 21.445 1.00 45.44 C
ATOM 19 O4 U B 221 55.562 101.432 21.064 1.00 46.83 O
ATOM 20 C5 U B 221 53.277 102.023 21.244 1.00 44.94 C
ATOM 21 C6 U B 221 52.420 102.933 21.715 1.00 46.76 C
ATOM 22 P A B 222 49.352 106.923 19.107 1.00 51.21 P
ATOM 23 OP1 A B 222 48.345 107.999 18.926 1.00 48.42 O
ATOM 24 OP2 A B 222 49.119 105.591 18.499 1.00 50.24 O
ATOM 25 O5' A B 222 50.765 107.419 18.575 1.00 50.46 O
TER
Atoms:
OP1: (48.345,107.999,18.926)
OP2: (49.119,105.591,18.499)
C3': (53.237,108.306,17.411)
C1': (54.602,107.016,18.832)
C5': (51.382,108.582,19.140)
O4': (53.497,107.503,19.579)
C8: (53.194,104.934,18.393)
O2': (55.600,108.913,17.798)
C6: (55.496,102.326,17.939)
C5: (54.708,103.464,18.141)
C4: (55.368,104.652,18.388)
P: (49.352,106.923,19.107)
C4': (52.854,108.578,18.850)
C2': (54.689,107.857,17.558)
C2: (57.340,103.686,18.238)
N1: (56.839,102.470,17.989)
N3: (56.697,104.836,18.452)
N6: (54.990,101.116,17.704)
N7: (53.335,103.654,18.145)
N9: (54.387,105.599,18.551)
O5': (50.765,107.419,18.575)
O3': (53.056,109.456,16.593)
OP2: (49.119,105.591,18.499)
C3': (53.237,108.306,17.411)
C1': (54.602,107.016,18.832)
C5': (51.382,108.582,19.140)
O4': (53.497,107.503,19.579)
C8: (53.194,104.934,18.393)
O2': (55.600,108.913,17.798)
C6: (55.496,102.326,17.939)
C5: (54.708,103.464,18.141)
C4: (55.368,104.652,18.388)
P: (49.352,106.923,19.107)
C4': (52.854,108.578,18.850)
C2': (54.689,107.857,17.558)
C2: (57.340,103.686,18.238)
N1: (56.839,102.470,17.989)
N3: (56.697,104.836,18.452)
N6: (54.990,101.116,17.704)
N7: (53.335,103.654,18.145)
N9: (54.387,105.599,18.551)
O5': (50.765,107.419,18.575)
O3': (53.056,109.456,16.593)
C4: (54.678,102.199,21.445)
N3: (55.024,103.343,22.131)
OP1: (47.052,102.206,19.990)
OP2: (49.302,100.980,19.653)
C2: (54.173,104.302,22.617)
C1': (51.858,105.035,22.904)
C3': (50.360,105.739,21.218)
O5': (49.163,103.136,20.925)
O4': (50.618,104.374,23.099)
C5': (48.565,104.057,21.853)
P: (48.390,101.815,20.494)
C4': (49.589,105.047,22.325)
C2': (51.603,106.214,21.958)
O2': (51.340,107.358,22.743)
N1: (52.829,104.058,22.394)
O4: (55.562,101.432,21.064)
O2: (54.580,105.291,23.196)
C6: (52.420,102.933,21.715)
C5: (53.277,102.023,21.244)
O3': (49.577,106.801,20.693)
N3: (55.024,103.343,22.131)
OP1: (47.052,102.206,19.990)
OP2: (49.302,100.980,19.653)
C2: (54.173,104.302,22.617)
C1': (51.858,105.035,22.904)
C3': (50.360,105.739,21.218)
O5': (49.163,103.136,20.925)
O4': (50.618,104.374,23.099)
C5': (48.565,104.057,21.853)
P: (48.390,101.815,20.494)
C4': (49.589,105.047,22.325)
C2': (51.603,106.214,21.958)
O2': (51.340,107.358,22.743)
N1: (52.829,104.058,22.394)
O4: (55.562,101.432,21.064)
O2: (54.580,105.291,23.196)
C6: (52.420,102.933,21.715)
C5: (53.277,102.023,21.244)
O3': (49.577,106.801,20.693)
Image (generated by PyMOL):