Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0617:0607
Extra
PDB:
ATOM 1 P A A 617 39.418 112.810 95.355 1.00 33.47 P
ATOM 2 OP1 A A 617 39.170 111.663 96.247 1.00 33.26 O
ATOM 3 OP2 A A 617 38.761 112.853 94.031 1.00 34.10 O
ATOM 4 O5' A A 617 39.093 114.148 96.167 1.00 33.74 O
ATOM 5 C5' A A 617 38.583 115.337 95.514 1.00 34.27 C
ATOM 6 C4' A A 617 39.106 116.577 96.204 1.00 35.51 C
ATOM 7 O4' A A 617 38.780 116.485 97.613 1.00 37.83 O
ATOM 8 C3' A A 617 40.621 116.748 96.195 1.00 37.12 C
ATOM 9 O3' A A 617 41.078 117.423 95.034 1.00 36.09 O
ATOM 10 C2' A A 617 40.866 117.613 97.418 1.00 38.82 C
ATOM 11 O2' A A 617 40.605 118.980 97.167 1.00 43.32 O
ATOM 12 C1' A A 617 39.825 117.059 98.389 1.00 38.96 C
ATOM 13 N9 A A 617 40.372 116.043 99.295 1.00 39.18 N
ATOM 14 C8 A A 617 40.062 114.709 99.374 1.00 39.34 C
ATOM 15 N7 A A 617 40.727 114.065 100.301 1.00 39.18 N
ATOM 16 C5 A A 617 41.533 115.040 100.869 1.00 39.10 C
ATOM 17 C6 A A 617 42.479 114.996 101.902 1.00 39.15 C
ATOM 18 N6 A A 617 42.787 113.889 102.577 1.00 41.67 N
ATOM 19 N1 A A 617 43.109 116.141 102.223 1.00 38.14 N
ATOM 20 C2 A A 617 42.804 117.249 101.548 1.00 38.01 C
ATOM 21 N3 A A 617 41.936 117.419 100.562 1.00 39.39 N
ATOM 22 C4 A A 617 41.325 116.261 100.263 1.00 39.39 C
ATOM 23 P A A 618 42.397 116.913 94.283 1.00 36.55 P
ATOM 24 OP1 A A 618 42.522 117.771 93.082 1.00 36.77 O
ATOM 25 OP2 A A 618 42.305 115.449 94.124 1.00 39.09 O
ATOM 26 O5' A A 618 43.600 117.191 95.294 1.00 37.17 O
TER
ATOM 1 O3' G B 606 31.108 113.928 99.806 1.00 40.93 O
ATOM 2 P U B 607 32.264 114.241 100.865 1.00 42.30 P
ATOM 3 OP1 U B 607 33.050 112.997 101.010 1.00 41.85 O
ATOM 4 OP2 U B 607 31.659 114.880 102.069 1.00 43.01 O
ATOM 5 O5' U B 607 33.152 115.348 100.146 1.00 42.25 O
ATOM 6 C5' U B 607 32.648 116.680 99.940 1.00 41.48 C
ATOM 7 C4' U B 607 33.792 117.644 99.734 1.00 42.39 C
ATOM 8 O4' U B 607 34.595 117.696 100.937 1.00 44.00 O
ATOM 9 C3' U B 607 34.785 117.284 98.638 1.00 41.21 C
ATOM 10 O3' U B 607 34.320 117.733 97.375 1.00 37.96 O
ATOM 11 C2' U B 607 36.035 118.038 99.069 1.00 43.72 C
ATOM 12 O2' U B 607 35.987 119.418 98.770 1.00 44.64 O
ATOM 13 C1' U B 607 35.954 117.907 100.588 1.00 44.57 C
ATOM 14 N1 U B 607 36.772 116.827 101.157 1.00 43.65 N
ATOM 15 C2 U B 607 38.040 117.160 101.578 1.00 44.01 C
ATOM 16 O2 U B 607 38.512 118.278 101.438 1.00 44.10 O
ATOM 17 N3 U B 607 38.741 116.139 102.165 1.00 44.99 N
ATOM 18 C4 U B 607 38.318 114.845 102.361 1.00 45.21 C
ATOM 19 O4 U B 607 39.039 114.061 102.981 1.00 45.24 O
ATOM 20 C5 U B 607 37.007 114.568 101.864 1.00 44.97 C
ATOM 21 C6 U B 607 36.297 115.544 101.291 1.00 44.03 C
ATOM 22 P A B 608 33.961 116.668 96.238 1.00 37.57 P
ATOM 23 OP1 A B 608 32.723 117.112 95.558 1.00 36.67 O
ATOM 24 OP2 A B 608 34.026 115.308 96.823 1.00 38.26 O
ATOM 25 O5' A B 608 35.154 116.806 95.200 1.00 36.27 O
TER
ATOM 2 OP1 A A 617 39.170 111.663 96.247 1.00 33.26 O
ATOM 3 OP2 A A 617 38.761 112.853 94.031 1.00 34.10 O
ATOM 4 O5' A A 617 39.093 114.148 96.167 1.00 33.74 O
ATOM 5 C5' A A 617 38.583 115.337 95.514 1.00 34.27 C
ATOM 6 C4' A A 617 39.106 116.577 96.204 1.00 35.51 C
ATOM 7 O4' A A 617 38.780 116.485 97.613 1.00 37.83 O
ATOM 8 C3' A A 617 40.621 116.748 96.195 1.00 37.12 C
ATOM 9 O3' A A 617 41.078 117.423 95.034 1.00 36.09 O
ATOM 10 C2' A A 617 40.866 117.613 97.418 1.00 38.82 C
ATOM 11 O2' A A 617 40.605 118.980 97.167 1.00 43.32 O
ATOM 12 C1' A A 617 39.825 117.059 98.389 1.00 38.96 C
ATOM 13 N9 A A 617 40.372 116.043 99.295 1.00 39.18 N
ATOM 14 C8 A A 617 40.062 114.709 99.374 1.00 39.34 C
ATOM 15 N7 A A 617 40.727 114.065 100.301 1.00 39.18 N
ATOM 16 C5 A A 617 41.533 115.040 100.869 1.00 39.10 C
ATOM 17 C6 A A 617 42.479 114.996 101.902 1.00 39.15 C
ATOM 18 N6 A A 617 42.787 113.889 102.577 1.00 41.67 N
ATOM 19 N1 A A 617 43.109 116.141 102.223 1.00 38.14 N
ATOM 20 C2 A A 617 42.804 117.249 101.548 1.00 38.01 C
ATOM 21 N3 A A 617 41.936 117.419 100.562 1.00 39.39 N
ATOM 22 C4 A A 617 41.325 116.261 100.263 1.00 39.39 C
ATOM 23 P A A 618 42.397 116.913 94.283 1.00 36.55 P
ATOM 24 OP1 A A 618 42.522 117.771 93.082 1.00 36.77 O
ATOM 25 OP2 A A 618 42.305 115.449 94.124 1.00 39.09 O
ATOM 26 O5' A A 618 43.600 117.191 95.294 1.00 37.17 O
TER
ATOM 1 O3' G B 606 31.108 113.928 99.806 1.00 40.93 O
ATOM 2 P U B 607 32.264 114.241 100.865 1.00 42.30 P
ATOM 3 OP1 U B 607 33.050 112.997 101.010 1.00 41.85 O
ATOM 4 OP2 U B 607 31.659 114.880 102.069 1.00 43.01 O
ATOM 5 O5' U B 607 33.152 115.348 100.146 1.00 42.25 O
ATOM 6 C5' U B 607 32.648 116.680 99.940 1.00 41.48 C
ATOM 7 C4' U B 607 33.792 117.644 99.734 1.00 42.39 C
ATOM 8 O4' U B 607 34.595 117.696 100.937 1.00 44.00 O
ATOM 9 C3' U B 607 34.785 117.284 98.638 1.00 41.21 C
ATOM 10 O3' U B 607 34.320 117.733 97.375 1.00 37.96 O
ATOM 11 C2' U B 607 36.035 118.038 99.069 1.00 43.72 C
ATOM 12 O2' U B 607 35.987 119.418 98.770 1.00 44.64 O
ATOM 13 C1' U B 607 35.954 117.907 100.588 1.00 44.57 C
ATOM 14 N1 U B 607 36.772 116.827 101.157 1.00 43.65 N
ATOM 15 C2 U B 607 38.040 117.160 101.578 1.00 44.01 C
ATOM 16 O2 U B 607 38.512 118.278 101.438 1.00 44.10 O
ATOM 17 N3 U B 607 38.741 116.139 102.165 1.00 44.99 N
ATOM 18 C4 U B 607 38.318 114.845 102.361 1.00 45.21 C
ATOM 19 O4 U B 607 39.039 114.061 102.981 1.00 45.24 O
ATOM 20 C5 U B 607 37.007 114.568 101.864 1.00 44.97 C
ATOM 21 C6 U B 607 36.297 115.544 101.291 1.00 44.03 C
ATOM 22 P A B 608 33.961 116.668 96.238 1.00 37.57 P
ATOM 23 OP1 A B 608 32.723 117.112 95.558 1.00 36.67 O
ATOM 24 OP2 A B 608 34.026 115.308 96.823 1.00 38.26 O
ATOM 25 O5' A B 608 35.154 116.806 95.200 1.00 36.27 O
TER
Atoms:
OP1: (39.170,111.663,96.247)
OP2: (38.761,112.853,94.031)
C3': (40.621,116.748,96.195)
C1': (39.825,117.059,98.389)
C5': (38.583,115.337,95.514)
O4': (38.780,116.485,97.613)
C8: (40.062,114.709,99.374)
O2': (40.605,118.980,97.167)
C6: (42.479,114.996,101.902)
C5: (41.533,115.040,100.869)
C4: (41.325,116.261,100.263)
P: (39.418,112.810,95.355)
C4': (39.106,116.577,96.204)
C2': (40.866,117.613,97.418)
C2: (42.804,117.249,101.548)
N1: (43.109,116.141,102.223)
N3: (41.936,117.419,100.562)
N6: (42.787,113.889,102.577)
N7: (40.727,114.065,100.301)
N9: (40.372,116.043,99.295)
O5': (39.093,114.148,96.167)
O3': (41.078,117.423,95.034)
OP2: (38.761,112.853,94.031)
C3': (40.621,116.748,96.195)
C1': (39.825,117.059,98.389)
C5': (38.583,115.337,95.514)
O4': (38.780,116.485,97.613)
C8: (40.062,114.709,99.374)
O2': (40.605,118.980,97.167)
C6: (42.479,114.996,101.902)
C5: (41.533,115.040,100.869)
C4: (41.325,116.261,100.263)
P: (39.418,112.810,95.355)
C4': (39.106,116.577,96.204)
C2': (40.866,117.613,97.418)
C2: (42.804,117.249,101.548)
N1: (43.109,116.141,102.223)
N3: (41.936,117.419,100.562)
N6: (42.787,113.889,102.577)
N7: (40.727,114.065,100.301)
N9: (40.372,116.043,99.295)
O5': (39.093,114.148,96.167)
O3': (41.078,117.423,95.034)
C4: (38.318,114.845,102.361)
N3: (38.741,116.139,102.165)
OP1: (33.050,112.997,101.010)
OP2: (31.659,114.880,102.069)
C2: (38.040,117.160,101.578)
C1': (35.954,117.907,100.588)
C3': (34.785,117.284,98.638)
O5': (33.152,115.348,100.146)
O4': (34.595,117.696,100.937)
C5': (32.648,116.680,99.940)
P: (32.264,114.241,100.865)
C4': (33.792,117.644,99.734)
C2': (36.035,118.038,99.069)
O2': (35.987,119.418,98.770)
N1: (36.772,116.827,101.157)
O4: (39.039,114.061,102.981)
O2: (38.512,118.278,101.438)
C6: (36.297,115.544,101.291)
C5: (37.007,114.568,101.864)
O3': (34.320,117.733,97.375)
N3: (38.741,116.139,102.165)
OP1: (33.050,112.997,101.010)
OP2: (31.659,114.880,102.069)
C2: (38.040,117.160,101.578)
C1': (35.954,117.907,100.588)
C3': (34.785,117.284,98.638)
O5': (33.152,115.348,100.146)
O4': (34.595,117.696,100.937)
C5': (32.648,116.680,99.940)
P: (32.264,114.241,100.865)
C4': (33.792,117.644,99.734)
C2': (36.035,118.038,99.069)
O2': (35.987,119.418,98.770)
N1: (36.772,116.827,101.157)
O4: (39.039,114.061,102.981)
O2: (38.512,118.278,101.438)
C6: (36.297,115.544,101.291)
C5: (37.007,114.568,101.864)
O3': (34.320,117.733,97.375)
Image (generated by PyMOL):