Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12066:12065
Extra
PDB:
ATOM 1 O3' U A2065 -29.620 -9.051 51.018 1.00 93.55 O
ATOM 2 P A A2066 -29.212 -10.069 52.188 1.00 87.20 P
ATOM 3 OP1 A A2066 -27.994 -10.796 51.732 1.00 87.17 O
ATOM 4 OP2 A A2066 -30.421 -10.855 52.516 1.00 87.33 O
ATOM 5 O5' A A2066 -28.841 -9.086 53.392 1.00 86.97 O
ATOM 6 C5' A A2066 -27.730 -8.214 53.281 1.00 86.82 C
ATOM 7 C4' A A2066 -27.852 -7.019 54.186 1.00 86.66 C
ATOM 8 O4' A A2066 -29.146 -6.394 54.017 1.00 86.76 O
ATOM 9 C3' A A2066 -27.774 -7.304 55.670 1.00 86.52 C
ATOM 10 O3' A A2066 -26.461 -7.437 56.120 1.00 86.35 O
ATOM 11 C2' A A2066 -28.501 -6.122 56.289 1.00 86.44 C
ATOM 12 O2' A A2066 -27.661 -4.972 56.306 1.00 86.29 O
ATOM 13 C1' A A2066 -29.622 -5.913 55.272 1.00 86.64 C
ATOM 14 N9 A A2066 -30.837 -6.683 55.634 1.00 86.78 N
ATOM 15 C8 A A2066 -31.270 -7.839 55.028 1.00 86.96 C
ATOM 16 N7 A A2066 -32.360 -8.349 55.530 1.00 87.04 N
ATOM 17 C5 A A2066 -32.674 -7.472 56.548 1.00 86.91 C
ATOM 18 C6 A A2066 -33.741 -7.472 57.455 1.00 86.92 C
ATOM 19 N6 A A2066 -34.685 -8.414 57.451 1.00 87.08 N
ATOM 20 N1 A A2066 -33.799 -6.464 58.352 1.00 86.77 N
ATOM 21 C2 A A2066 -32.827 -5.539 58.318 1.00 86.62 C
ATOM 22 N3 A A2066 -31.762 -5.436 57.516 1.00 86.59 N
ATOM 23 C4 A A2066 -31.747 -6.446 56.635 1.00 86.75 C
ATOM 24 P U A2067 -26.052 -8.751 56.915 1.00 80.15 P
ATOM 25 OP1 U A2067 -24.568 -8.823 56.880 1.00 80.01 O
ATOM 26 OP2 U A2067 -26.845 -9.863 56.335 1.00 80.36 O
ATOM 27 O5' U A2067 -26.557 -8.443 58.397 1.00 80.02 O
TER
ATOM 1 O3' C B2064 -35.754 -10.263 49.720 1.00 97.20 O
ATOM 2 P U B2065 -34.688 -10.775 50.819 1.00 94.18 P
ATOM 3 OP1 U B2065 -34.121 -12.058 50.319 1.00 94.26 O
ATOM 4 OP2 U B2065 -35.376 -10.771 52.135 1.00 94.11 O
ATOM 5 O5' U B2065 -33.565 -9.640 50.788 1.00 94.00 O
ATOM 6 C5' U B2065 -32.539 -9.644 49.805 1.00 94.00 C
ATOM 7 C4' U B2065 -31.689 -8.406 49.893 1.00 93.82 C
ATOM 8 O4' U B2065 -32.542 -7.233 49.981 1.00 93.82 O
ATOM 9 C3' U B2065 -30.808 -8.301 51.120 1.00 93.60 C
ATOM 10 O3' U B2065 -29.620 -9.051 51.018 1.00 93.55 O
ATOM 11 C2' U B2065 -30.581 -6.803 51.240 1.00 93.47 C
ATOM 12 O2' U B2065 -29.626 -6.358 50.293 1.00 93.45 O
ATOM 13 C1' U B2065 -31.952 -6.268 50.834 1.00 93.61 C
ATOM 14 N1 U B2065 -32.841 -6.062 52.022 1.00 93.56 N
ATOM 15 C2 U B2065 -32.519 -5.077 52.953 1.00 93.37 C
ATOM 16 O2 U B2065 -31.560 -4.338 52.858 1.00 93.24 O
ATOM 17 N3 U B2065 -33.360 -4.959 54.028 1.00 93.33 N
ATOM 18 C4 U B2065 -34.492 -5.699 54.279 1.00 93.46 C
ATOM 19 O4 U B2065 -35.149 -5.461 55.294 1.00 93.41 O
ATOM 20 C5 U B2065 -34.779 -6.700 53.289 1.00 93.66 C
ATOM 21 C6 U B2065 -33.964 -6.843 52.230 1.00 93.70 C
ATOM 22 P A B2066 -29.212 -10.069 52.188 1.00 87.20 P
ATOM 23 OP1 A B2066 -27.994 -10.796 51.732 1.00 87.17 O
ATOM 24 OP2 A B2066 -30.421 -10.855 52.516 1.00 87.33 O
ATOM 25 O5' A B2066 -28.841 -9.086 53.392 1.00 86.97 O
TER
ATOM 2 P A A2066 -29.212 -10.069 52.188 1.00 87.20 P
ATOM 3 OP1 A A2066 -27.994 -10.796 51.732 1.00 87.17 O
ATOM 4 OP2 A A2066 -30.421 -10.855 52.516 1.00 87.33 O
ATOM 5 O5' A A2066 -28.841 -9.086 53.392 1.00 86.97 O
ATOM 6 C5' A A2066 -27.730 -8.214 53.281 1.00 86.82 C
ATOM 7 C4' A A2066 -27.852 -7.019 54.186 1.00 86.66 C
ATOM 8 O4' A A2066 -29.146 -6.394 54.017 1.00 86.76 O
ATOM 9 C3' A A2066 -27.774 -7.304 55.670 1.00 86.52 C
ATOM 10 O3' A A2066 -26.461 -7.437 56.120 1.00 86.35 O
ATOM 11 C2' A A2066 -28.501 -6.122 56.289 1.00 86.44 C
ATOM 12 O2' A A2066 -27.661 -4.972 56.306 1.00 86.29 O
ATOM 13 C1' A A2066 -29.622 -5.913 55.272 1.00 86.64 C
ATOM 14 N9 A A2066 -30.837 -6.683 55.634 1.00 86.78 N
ATOM 15 C8 A A2066 -31.270 -7.839 55.028 1.00 86.96 C
ATOM 16 N7 A A2066 -32.360 -8.349 55.530 1.00 87.04 N
ATOM 17 C5 A A2066 -32.674 -7.472 56.548 1.00 86.91 C
ATOM 18 C6 A A2066 -33.741 -7.472 57.455 1.00 86.92 C
ATOM 19 N6 A A2066 -34.685 -8.414 57.451 1.00 87.08 N
ATOM 20 N1 A A2066 -33.799 -6.464 58.352 1.00 86.77 N
ATOM 21 C2 A A2066 -32.827 -5.539 58.318 1.00 86.62 C
ATOM 22 N3 A A2066 -31.762 -5.436 57.516 1.00 86.59 N
ATOM 23 C4 A A2066 -31.747 -6.446 56.635 1.00 86.75 C
ATOM 24 P U A2067 -26.052 -8.751 56.915 1.00 80.15 P
ATOM 25 OP1 U A2067 -24.568 -8.823 56.880 1.00 80.01 O
ATOM 26 OP2 U A2067 -26.845 -9.863 56.335 1.00 80.36 O
ATOM 27 O5' U A2067 -26.557 -8.443 58.397 1.00 80.02 O
TER
ATOM 1 O3' C B2064 -35.754 -10.263 49.720 1.00 97.20 O
ATOM 2 P U B2065 -34.688 -10.775 50.819 1.00 94.18 P
ATOM 3 OP1 U B2065 -34.121 -12.058 50.319 1.00 94.26 O
ATOM 4 OP2 U B2065 -35.376 -10.771 52.135 1.00 94.11 O
ATOM 5 O5' U B2065 -33.565 -9.640 50.788 1.00 94.00 O
ATOM 6 C5' U B2065 -32.539 -9.644 49.805 1.00 94.00 C
ATOM 7 C4' U B2065 -31.689 -8.406 49.893 1.00 93.82 C
ATOM 8 O4' U B2065 -32.542 -7.233 49.981 1.00 93.82 O
ATOM 9 C3' U B2065 -30.808 -8.301 51.120 1.00 93.60 C
ATOM 10 O3' U B2065 -29.620 -9.051 51.018 1.00 93.55 O
ATOM 11 C2' U B2065 -30.581 -6.803 51.240 1.00 93.47 C
ATOM 12 O2' U B2065 -29.626 -6.358 50.293 1.00 93.45 O
ATOM 13 C1' U B2065 -31.952 -6.268 50.834 1.00 93.61 C
ATOM 14 N1 U B2065 -32.841 -6.062 52.022 1.00 93.56 N
ATOM 15 C2 U B2065 -32.519 -5.077 52.953 1.00 93.37 C
ATOM 16 O2 U B2065 -31.560 -4.338 52.858 1.00 93.24 O
ATOM 17 N3 U B2065 -33.360 -4.959 54.028 1.00 93.33 N
ATOM 18 C4 U B2065 -34.492 -5.699 54.279 1.00 93.46 C
ATOM 19 O4 U B2065 -35.149 -5.461 55.294 1.00 93.41 O
ATOM 20 C5 U B2065 -34.779 -6.700 53.289 1.00 93.66 C
ATOM 21 C6 U B2065 -33.964 -6.843 52.230 1.00 93.70 C
ATOM 22 P A B2066 -29.212 -10.069 52.188 1.00 87.20 P
ATOM 23 OP1 A B2066 -27.994 -10.796 51.732 1.00 87.17 O
ATOM 24 OP2 A B2066 -30.421 -10.855 52.516 1.00 87.33 O
ATOM 25 O5' A B2066 -28.841 -9.086 53.392 1.00 86.97 O
TER
Atoms:
OP1: (-27.994,-10.796,51.732)
OP2: (-30.421,-10.855,52.516)
C3': (-27.774,-7.304,55.670)
C1': (-29.622,-5.913,55.272)
C5': (-27.730,-8.214,53.281)
O4': (-29.146,-6.394,54.017)
C8: (-31.270,-7.839,55.028)
O2': (-27.661,-4.972,56.306)
C6: (-33.741,-7.472,57.455)
C5: (-32.674,-7.472,56.548)
C4: (-31.747,-6.446,56.635)
P: (-29.212,-10.069,52.188)
C4': (-27.852,-7.019,54.186)
C2': (-28.501,-6.122,56.289)
C2: (-32.827,-5.539,58.318)
N1: (-33.799,-6.464,58.352)
N3: (-31.762,-5.436,57.516)
N6: (-34.685,-8.414,57.451)
N7: (-32.360,-8.349,55.530)
N9: (-30.837,-6.683,55.634)
O5': (-28.841,-9.086,53.392)
O3': (-26.461,-7.437,56.120)
OP2: (-30.421,-10.855,52.516)
C3': (-27.774,-7.304,55.670)
C1': (-29.622,-5.913,55.272)
C5': (-27.730,-8.214,53.281)
O4': (-29.146,-6.394,54.017)
C8: (-31.270,-7.839,55.028)
O2': (-27.661,-4.972,56.306)
C6: (-33.741,-7.472,57.455)
C5: (-32.674,-7.472,56.548)
C4: (-31.747,-6.446,56.635)
P: (-29.212,-10.069,52.188)
C4': (-27.852,-7.019,54.186)
C2': (-28.501,-6.122,56.289)
C2: (-32.827,-5.539,58.318)
N1: (-33.799,-6.464,58.352)
N3: (-31.762,-5.436,57.516)
N6: (-34.685,-8.414,57.451)
N7: (-32.360,-8.349,55.530)
N9: (-30.837,-6.683,55.634)
O5': (-28.841,-9.086,53.392)
O3': (-26.461,-7.437,56.120)
C4: (-34.492,-5.699,54.279)
N3: (-33.360,-4.959,54.028)
OP1: (-34.121,-12.058,50.319)
OP2: (-35.376,-10.771,52.135)
C2: (-32.519,-5.077,52.953)
C1': (-31.952,-6.268,50.834)
C3': (-30.808,-8.301,51.120)
O5': (-33.565,-9.640,50.788)
O4': (-32.542,-7.233,49.981)
C5': (-32.539,-9.644,49.805)
P: (-34.688,-10.775,50.819)
C4': (-31.689,-8.406,49.893)
C2': (-30.581,-6.803,51.240)
O2': (-29.626,-6.358,50.293)
N1: (-32.841,-6.062,52.022)
O4: (-35.149,-5.461,55.294)
O2: (-31.560,-4.338,52.858)
C6: (-33.964,-6.843,52.230)
C5: (-34.779,-6.700,53.289)
O3': (-29.620,-9.051,51.018)
N3: (-33.360,-4.959,54.028)
OP1: (-34.121,-12.058,50.319)
OP2: (-35.376,-10.771,52.135)
C2: (-32.519,-5.077,52.953)
C1': (-31.952,-6.268,50.834)
C3': (-30.808,-8.301,51.120)
O5': (-33.565,-9.640,50.788)
O4': (-32.542,-7.233,49.981)
C5': (-32.539,-9.644,49.805)
P: (-34.688,-10.775,50.819)
C4': (-31.689,-8.406,49.893)
C2': (-30.581,-6.803,51.240)
O2': (-29.626,-6.358,50.293)
N1: (-32.841,-6.062,52.022)
O4: (-35.149,-5.461,55.294)
O2: (-31.560,-4.338,52.858)
C6: (-33.964,-6.843,52.230)
C5: (-34.779,-6.700,53.289)
O3': (-29.620,-9.051,51.018)
Image (generated by PyMOL):