ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3RKF:C37:C36

Extra

PDB:
ATOM 1 O3' U A 36 30.132 -34.766 -61.956 1.00 53.21 O
ATOM 2 P A A 37 29.458 -34.162 -63.285 1.00 55.49 P
ATOM 3 OP1 A A 37 29.149 -35.306 -64.176 1.00 41.45 O
ATOM 4 OP2 A A 37 30.358 -33.092 -63.783 1.00 62.93 O
ATOM 5 O5' A A 37 28.105 -33.520 -62.742 1.00 49.56 O
ATOM 6 C5' A A 37 27.084 -34.331 -62.178 1.00 51.74 C
ATOM 7 C4' A A 37 26.120 -33.512 -61.355 1.00 52.11 C
ATOM 8 O4' A A 37 26.852 -32.772 -60.344 1.00 52.11 O
ATOM 9 C3' A A 37 25.335 -32.449 -62.112 1.00 50.35 C
ATOM 10 O3' A A 37 24.179 -32.970 -62.748 1.00 53.20 O
ATOM 11 C2' A A 37 25.021 -31.421 -61.030 1.00 49.68 C
ATOM 12 O2' A A 37 23.905 -31.832 -60.254 1.00 46.93 O
ATOM 13 C1' A A 37 26.272 -31.500 -60.155 1.00 50.67 C
ATOM 14 N9 A A 37 27.270 -30.473 -60.510 1.00 46.58 N
ATOM 15 C8 A A 37 28.470 -30.660 -61.151 1.00 47.77 C
ATOM 16 N7 A A 37 29.159 -29.558 -61.319 1.00 47.08 N
ATOM 17 C5 A A 37 28.362 -28.579 -60.742 1.00 45.84 C
ATOM 18 C6 A A 37 28.528 -27.191 -60.593 1.00 45.25 C
ATOM 19 N6 A A 37 29.598 -26.523 -61.030 1.00 48.39 N
ATOM 20 N1 A A 37 27.546 -26.505 -59.970 1.00 39.82 N
ATOM 21 C2 A A 37 26.474 -27.177 -59.531 1.00 43.71 C
ATOM 22 N3 A A 37 26.203 -28.478 -59.612 1.00 44.78 N
ATOM 23 C4 A A 37 27.199 -29.130 -60.234 1.00 45.28 C
ATOM 24 P C A 38 23.979 -32.803 -64.334 1.00 58.22 P
ATOM 25 OP1 C A 38 22.973 -33.807 -64.754 1.00 51.33 O
ATOM 26 OP2 C A 38 25.327 -32.844 -64.950 1.00 51.03 O
ATOM 27 O5' C A 38 23.368 -31.338 -64.464 1.00 53.53 O
TER

ATOM 1 O3' C B 35 35.987 -32.680 -60.587 1.00 54.67 O
ATOM 2 P U B 36 34.946 -32.544 -61.805 1.00 49.98 P
ATOM 3 OP1 U B 36 35.348 -33.531 -62.836 1.00 58.24 O
ATOM 4 OP2 U B 36 34.893 -31.109 -62.176 1.00 57.91 O
ATOM 5 O5' U B 36 33.565 -32.982 -61.147 1.00 47.87 O
ATOM 6 C5' U B 36 33.226 -34.353 -60.997 1.00 53.27 C
ATOM 7 C4' U B 36 31.908 -34.514 -60.283 1.00 51.72 C
ATOM 8 O4' U B 36 31.967 -33.835 -59.000 1.00 50.36 O
ATOM 9 C3' U B 36 30.699 -33.904 -60.982 1.00 48.65 C
ATOM 10 O3' U B 36 30.132 -34.766 -61.956 1.00 53.21 O
ATOM 11 C2' U B 36 29.759 -33.586 -59.828 1.00 47.67 C
ATOM 12 O2' U B 36 29.069 -34.754 -59.405 1.00 46.30 O
ATOM 13 C1' U B 36 30.745 -33.187 -58.733 1.00 48.46 C
ATOM 14 N1 U B 36 30.988 -31.729 -58.705 1.00 46.14 N
ATOM 15 C2 U B 36 30.133 -30.944 -57.961 1.00 44.00 C
ATOM 16 O2 U B 36 29.181 -31.395 -57.348 1.00 42.28 O
ATOM 17 N3 U B 36 30.427 -29.604 -57.975 1.00 46.03 N
ATOM 18 C4 U B 36 31.470 -28.985 -58.632 1.00 46.33 C
ATOM 19 O4 U B 36 31.597 -27.764 -58.540 1.00 46.98 O
ATOM 20 C5 U B 36 32.317 -29.868 -59.372 1.00 50.30 C
ATOM 21 C6 U B 36 32.054 -31.177 -59.377 1.00 48.20 C
ATOM 22 P A B 37 29.458 -34.162 -63.285 1.00 55.49 P
ATOM 23 OP1 A B 37 29.149 -35.306 -64.176 1.00 41.45 O
ATOM 24 OP2 A B 37 30.358 -33.092 -63.783 1.00 62.93 O
ATOM 25 O5' A B 37 28.105 -33.520 -62.742 1.00 49.56 O
TER

Atoms:
OP1: (29.149,-35.306,-64.176)
OP2: (30.358,-33.092,-63.783)
C3': (25.335,-32.449,-62.112)
C1': (26.272,-31.500,-60.155)
C5': (27.084,-34.331,-62.178)
O4': (26.852,-32.772,-60.344)
C8: (28.470,-30.660,-61.151)
O2': (23.905,-31.832,-60.254)
C6: (28.528,-27.191,-60.593)
C5: (28.362,-28.579,-60.742)
C4: (27.199,-29.130,-60.234)
P: (29.458,-34.162,-63.285)
C4': (26.120,-33.512,-61.355)
C2': (25.021,-31.421,-61.030)
C2: (26.474,-27.177,-59.531)
N1: (27.546,-26.505,-59.970)
N3: (26.203,-28.478,-59.612)
N6: (29.598,-26.523,-61.030)
N7: (29.159,-29.558,-61.319)
N9: (27.270,-30.473,-60.510)
O5': (28.105,-33.520,-62.742)
O3': (24.179,-32.970,-62.748)
C4: (31.470,-28.985,-58.632)
N3: (30.427,-29.604,-57.975)
OP1: (35.348,-33.531,-62.836)
OP2: (34.893,-31.109,-62.176)
C2: (30.133,-30.944,-57.961)
C1': (30.745,-33.187,-58.733)
C3': (30.699,-33.904,-60.982)
O5': (33.565,-32.982,-61.147)
O4': (31.967,-33.835,-59.000)
C5': (33.226,-34.353,-60.997)
P: (34.946,-32.544,-61.805)
C4': (31.908,-34.514,-60.283)
C2': (29.759,-33.586,-59.828)
O2': (29.069,-34.754,-59.405)
N1: (30.988,-31.729,-58.705)
O4: (31.597,-27.764,-58.540)
O2: (29.181,-31.395,-57.348)
C6: (32.054,-31.177,-59.377)
C5: (32.317,-29.868,-59.372)
O3': (30.132,-34.766,-61.956)
Image (generated by PyMOL):
PyMOL image
show in jmol