Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1234:A1233
Extra
PDB:
ATOM 1 O3' U A1233 -97.964 126.602 64.152 1.00 58.03 O
ATOM 2 P A A1234 -97.443 128.049 63.714 1.00 60.31 P
ATOM 3 OP1 A A1234 -98.416 128.593 62.737 1.00 60.31 O
ATOM 4 OP2 A A1234 -96.020 127.905 63.307 1.00 60.31 O
ATOM 5 O5' A A1234 -97.532 128.859 65.066 1.00 60.31 O
ATOM 6 C5' A A1234 -96.665 129.943 65.303 1.00 60.31 C
ATOM 7 C4' A A1234 -96.710 130.382 66.735 1.00 60.31 C
ATOM 8 O4' A A1234 -96.129 129.356 67.584 1.00 60.31 O
ATOM 9 C3' A A1234 -95.926 131.641 67.040 1.00 60.31 C
ATOM 10 O3' A A1234 -96.691 132.806 66.789 1.00 60.31 O
ATOM 11 C2' A A1234 -95.528 131.461 68.502 1.00 60.31 C
ATOM 12 O2' A A1234 -96.588 131.849 69.364 1.00 60.31 O
ATOM 13 C1' A A1234 -95.345 129.941 68.597 1.00 60.31 C
ATOM 14 N9 A A1234 -93.937 129.520 68.392 1.00 60.07 N
ATOM 15 C8 A A1234 -93.370 129.145 67.193 1.00 60.07 C
ATOM 16 N7 A A1234 -92.111 128.794 67.266 1.00 60.07 N
ATOM 17 C5 A A1234 -91.824 128.936 68.611 1.00 60.07 C
ATOM 18 C6 A A1234 -90.638 128.715 69.326 1.00 60.07 C
ATOM 19 N6 A A1234 -89.509 128.298 68.733 1.00 60.07 N
ATOM 20 N1 A A1234 -90.663 128.942 70.661 1.00 60.07 N
ATOM 21 C2 A A1234 -91.806 129.362 71.221 1.00 60.07 C
ATOM 22 N3 A A1234 -92.982 129.609 70.645 1.00 60.07 N
ATOM 23 C4 A A1234 -92.930 129.371 69.323 1.00 60.07 C
ATOM 24 P C A1235 -96.054 134.063 66.018 1.00 55.90 P
ATOM 25 OP1 C A1235 -97.149 134.704 65.255 1.00 55.90 O
ATOM 26 OP2 C A1235 -94.856 133.580 65.281 1.00 55.90 O
ATOM 27 O5' C A1235 -95.616 135.000 67.225 1.00 55.90 O
TER
ATOM 1 O3' C B1232 -95.408 121.790 62.159 1.00 42.00 O
ATOM 2 P U B1233 -95.319 123.390 62.026 1.00 58.03 P
ATOM 3 OP1 U B1233 -96.257 123.799 60.960 1.00 58.03 O
ATOM 4 OP2 U B1233 -93.881 123.735 61.885 1.00 58.03 O
ATOM 5 O5' U B1233 -95.860 123.885 63.433 1.00 58.03 O
ATOM 6 C5' U B1233 -97.149 123.508 63.883 1.00 58.03 C
ATOM 7 C4' U B1233 -97.598 124.354 65.046 1.00 58.03 C
ATOM 8 O4' U B1233 -97.018 123.850 66.286 1.00 58.03 O
ATOM 9 C3' U B1233 -97.172 125.811 65.011 1.00 58.03 C
ATOM 10 O3' U B1233 -97.964 126.602 64.152 1.00 58.03 O
ATOM 11 C2' U B1233 -97.265 126.203 66.475 1.00 58.03 C
ATOM 12 O2' U B1233 -98.623 126.372 66.863 1.00 58.03 O
ATOM 13 C1' U B1233 -96.711 124.938 67.143 1.00 58.03 C
ATOM 14 N1 U B1233 -95.220 125.003 67.319 1.00 57.42 N
ATOM 15 C2 U B1233 -94.640 125.678 68.404 1.00 57.42 C
ATOM 16 O2 U B1233 -95.265 126.256 69.284 1.00 57.42 O
ATOM 17 N3 U B1233 -93.264 125.655 68.418 1.00 57.42 N
ATOM 18 C4 U B1233 -92.429 125.048 67.499 1.00 57.42 C
ATOM 19 O4 U B1233 -91.215 125.116 67.647 1.00 57.42 O
ATOM 20 C5 U B1233 -93.079 124.380 66.422 1.00 57.42 C
ATOM 21 C6 U B1233 -94.415 124.384 66.376 1.00 57.42 C
ATOM 22 P A B1234 -97.443 128.049 63.714 1.00 60.31 P
ATOM 23 OP1 A B1234 -98.416 128.593 62.737 1.00 60.31 O
ATOM 24 OP2 A B1234 -96.020 127.905 63.307 1.00 60.31 O
ATOM 25 O5' A B1234 -97.532 128.859 65.066 1.00 60.31 O
TER
ATOM 2 P A A1234 -97.443 128.049 63.714 1.00 60.31 P
ATOM 3 OP1 A A1234 -98.416 128.593 62.737 1.00 60.31 O
ATOM 4 OP2 A A1234 -96.020 127.905 63.307 1.00 60.31 O
ATOM 5 O5' A A1234 -97.532 128.859 65.066 1.00 60.31 O
ATOM 6 C5' A A1234 -96.665 129.943 65.303 1.00 60.31 C
ATOM 7 C4' A A1234 -96.710 130.382 66.735 1.00 60.31 C
ATOM 8 O4' A A1234 -96.129 129.356 67.584 1.00 60.31 O
ATOM 9 C3' A A1234 -95.926 131.641 67.040 1.00 60.31 C
ATOM 10 O3' A A1234 -96.691 132.806 66.789 1.00 60.31 O
ATOM 11 C2' A A1234 -95.528 131.461 68.502 1.00 60.31 C
ATOM 12 O2' A A1234 -96.588 131.849 69.364 1.00 60.31 O
ATOM 13 C1' A A1234 -95.345 129.941 68.597 1.00 60.31 C
ATOM 14 N9 A A1234 -93.937 129.520 68.392 1.00 60.07 N
ATOM 15 C8 A A1234 -93.370 129.145 67.193 1.00 60.07 C
ATOM 16 N7 A A1234 -92.111 128.794 67.266 1.00 60.07 N
ATOM 17 C5 A A1234 -91.824 128.936 68.611 1.00 60.07 C
ATOM 18 C6 A A1234 -90.638 128.715 69.326 1.00 60.07 C
ATOM 19 N6 A A1234 -89.509 128.298 68.733 1.00 60.07 N
ATOM 20 N1 A A1234 -90.663 128.942 70.661 1.00 60.07 N
ATOM 21 C2 A A1234 -91.806 129.362 71.221 1.00 60.07 C
ATOM 22 N3 A A1234 -92.982 129.609 70.645 1.00 60.07 N
ATOM 23 C4 A A1234 -92.930 129.371 69.323 1.00 60.07 C
ATOM 24 P C A1235 -96.054 134.063 66.018 1.00 55.90 P
ATOM 25 OP1 C A1235 -97.149 134.704 65.255 1.00 55.90 O
ATOM 26 OP2 C A1235 -94.856 133.580 65.281 1.00 55.90 O
ATOM 27 O5' C A1235 -95.616 135.000 67.225 1.00 55.90 O
TER
ATOM 1 O3' C B1232 -95.408 121.790 62.159 1.00 42.00 O
ATOM 2 P U B1233 -95.319 123.390 62.026 1.00 58.03 P
ATOM 3 OP1 U B1233 -96.257 123.799 60.960 1.00 58.03 O
ATOM 4 OP2 U B1233 -93.881 123.735 61.885 1.00 58.03 O
ATOM 5 O5' U B1233 -95.860 123.885 63.433 1.00 58.03 O
ATOM 6 C5' U B1233 -97.149 123.508 63.883 1.00 58.03 C
ATOM 7 C4' U B1233 -97.598 124.354 65.046 1.00 58.03 C
ATOM 8 O4' U B1233 -97.018 123.850 66.286 1.00 58.03 O
ATOM 9 C3' U B1233 -97.172 125.811 65.011 1.00 58.03 C
ATOM 10 O3' U B1233 -97.964 126.602 64.152 1.00 58.03 O
ATOM 11 C2' U B1233 -97.265 126.203 66.475 1.00 58.03 C
ATOM 12 O2' U B1233 -98.623 126.372 66.863 1.00 58.03 O
ATOM 13 C1' U B1233 -96.711 124.938 67.143 1.00 58.03 C
ATOM 14 N1 U B1233 -95.220 125.003 67.319 1.00 57.42 N
ATOM 15 C2 U B1233 -94.640 125.678 68.404 1.00 57.42 C
ATOM 16 O2 U B1233 -95.265 126.256 69.284 1.00 57.42 O
ATOM 17 N3 U B1233 -93.264 125.655 68.418 1.00 57.42 N
ATOM 18 C4 U B1233 -92.429 125.048 67.499 1.00 57.42 C
ATOM 19 O4 U B1233 -91.215 125.116 67.647 1.00 57.42 O
ATOM 20 C5 U B1233 -93.079 124.380 66.422 1.00 57.42 C
ATOM 21 C6 U B1233 -94.415 124.384 66.376 1.00 57.42 C
ATOM 22 P A B1234 -97.443 128.049 63.714 1.00 60.31 P
ATOM 23 OP1 A B1234 -98.416 128.593 62.737 1.00 60.31 O
ATOM 24 OP2 A B1234 -96.020 127.905 63.307 1.00 60.31 O
ATOM 25 O5' A B1234 -97.532 128.859 65.066 1.00 60.31 O
TER
Atoms:
OP1: (-98.416,128.593,62.737)
OP2: (-96.020,127.905,63.307)
C3': (-95.926,131.641,67.040)
C1': (-95.345,129.941,68.597)
C5': (-96.665,129.943,65.303)
O4': (-96.129,129.356,67.584)
C8: (-93.370,129.145,67.193)
O2': (-96.588,131.849,69.364)
C6: (-90.638,128.715,69.326)
C5: (-91.824,128.936,68.611)
C4: (-92.930,129.371,69.323)
P: (-97.443,128.049,63.714)
C4': (-96.710,130.382,66.735)
C2': (-95.528,131.461,68.502)
C2: (-91.806,129.362,71.221)
N1: (-90.663,128.942,70.661)
N3: (-92.982,129.609,70.645)
N6: (-89.509,128.298,68.733)
N7: (-92.111,128.794,67.266)
N9: (-93.937,129.520,68.392)
O5': (-97.532,128.859,65.066)
O3': (-96.691,132.806,66.789)
OP2: (-96.020,127.905,63.307)
C3': (-95.926,131.641,67.040)
C1': (-95.345,129.941,68.597)
C5': (-96.665,129.943,65.303)
O4': (-96.129,129.356,67.584)
C8: (-93.370,129.145,67.193)
O2': (-96.588,131.849,69.364)
C6: (-90.638,128.715,69.326)
C5: (-91.824,128.936,68.611)
C4: (-92.930,129.371,69.323)
P: (-97.443,128.049,63.714)
C4': (-96.710,130.382,66.735)
C2': (-95.528,131.461,68.502)
C2: (-91.806,129.362,71.221)
N1: (-90.663,128.942,70.661)
N3: (-92.982,129.609,70.645)
N6: (-89.509,128.298,68.733)
N7: (-92.111,128.794,67.266)
N9: (-93.937,129.520,68.392)
O5': (-97.532,128.859,65.066)
O3': (-96.691,132.806,66.789)
C4: (-92.429,125.048,67.499)
N3: (-93.264,125.655,68.418)
OP1: (-96.257,123.799,60.960)
OP2: (-93.881,123.735,61.885)
C2: (-94.640,125.678,68.404)
C1': (-96.711,124.938,67.143)
C3': (-97.172,125.811,65.011)
O5': (-95.860,123.885,63.433)
O4': (-97.018,123.850,66.286)
C5': (-97.149,123.508,63.883)
P: (-95.319,123.390,62.026)
C4': (-97.598,124.354,65.046)
C2': (-97.265,126.203,66.475)
O2': (-98.623,126.372,66.863)
N1: (-95.220,125.003,67.319)
O4: (-91.215,125.116,67.647)
O2: (-95.265,126.256,69.284)
C6: (-94.415,124.384,66.376)
C5: (-93.079,124.380,66.422)
O3': (-97.964,126.602,64.152)
N3: (-93.264,125.655,68.418)
OP1: (-96.257,123.799,60.960)
OP2: (-93.881,123.735,61.885)
C2: (-94.640,125.678,68.404)
C1': (-96.711,124.938,67.143)
C3': (-97.172,125.811,65.011)
O5': (-95.860,123.885,63.433)
O4': (-97.018,123.850,66.286)
C5': (-97.149,123.508,63.883)
P: (-95.319,123.390,62.026)
C4': (-97.598,124.354,65.046)
C2': (-97.265,126.203,66.475)
O2': (-98.623,126.372,66.863)
N1: (-95.220,125.003,67.319)
O4: (-91.215,125.116,67.647)
O2: (-95.265,126.256,69.284)
C6: (-94.415,124.384,66.376)
C5: (-93.079,124.380,66.422)
O3': (-97.964,126.602,64.152)
Image (generated by PyMOL):