ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCL:0617:0607

Extra

PDB:
ATOM 1 P A A 617 39.735 112.818 95.805 1.00 38.30 P
ATOM 2 OP1 A A 617 39.553 111.666 96.708 1.00 38.76 O
ATOM 3 OP2 A A 617 39.008 112.849 94.518 1.00 40.87 O
ATOM 4 O5' A A 617 39.413 114.161 96.603 1.00 38.73 O
ATOM 5 C5' A A 617 38.976 115.358 95.920 1.00 38.86 C
ATOM 6 C4' A A 617 39.503 116.589 96.629 1.00 39.64 C
ATOM 7 O4' A A 617 39.138 116.502 98.029 1.00 40.32 O
ATOM 8 C3' A A 617 41.017 116.768 96.656 1.00 39.70 C
ATOM 9 O3' A A 617 41.499 117.435 95.494 1.00 39.48 O
ATOM 10 C2' A A 617 41.214 117.647 97.878 1.00 39.92 C
ATOM 11 O2' A A 617 40.915 119.000 97.609 1.00 42.85 O
ATOM 12 C1' A A 617 40.160 117.080 98.826 1.00 41.00 C
ATOM 13 N9 A A 617 40.699 116.050 99.713 1.00 41.36 N
ATOM 14 C8 A A 617 40.414 114.705 99.731 1.00 41.77 C
ATOM 15 N7 A A 617 41.083 114.036 100.638 1.00 41.18 N
ATOM 16 C5 A A 617 41.856 115.005 101.263 1.00 40.38 C
ATOM 17 C6 A A 617 42.788 114.938 102.306 1.00 40.13 C
ATOM 18 N6 A A 617 43.113 113.808 102.940 1.00 39.80 N
ATOM 19 N1 A A 617 43.384 116.087 102.684 1.00 40.26 N
ATOM 20 C2 A A 617 43.053 117.219 102.058 1.00 38.55 C
ATOM 21 N3 A A 617 42.194 117.410 101.070 1.00 38.43 N
ATOM 22 C4 A A 617 41.624 116.249 100.710 1.00 40.02 C
ATOM 23 P A A 618 42.735 116.821 94.668 1.00 42.13 P
ATOM 24 OP1 A A 618 42.771 117.595 93.404 1.00 40.27 O
ATOM 25 OP2 A A 618 42.587 115.344 94.619 1.00 42.44 O
ATOM 26 O5' A A 618 44.039 117.119 95.547 1.00 41.01 O
TER

ATOM 1 O3' G B 606 31.312 114.053 100.245 1.00 50.43 O
ATOM 2 P U B 607 32.515 114.276 101.281 1.00 52.65 P
ATOM 3 OP1 U B 607 33.302 113.012 101.283 1.00 49.12 O
ATOM 4 OP2 U B 607 32.000 114.840 102.568 1.00 51.70 O
ATOM 5 O5' U B 607 33.398 115.406 100.594 1.00 51.70 O
ATOM 6 C5' U B 607 32.911 116.745 100.434 1.00 47.55 C
ATOM 7 C4' U B 607 34.072 117.662 100.166 1.00 47.10 C
ATOM 8 O4' U B 607 34.940 117.621 101.319 1.00 45.64 O
ATOM 9 C3' U B 607 34.978 117.237 99.016 1.00 46.59 C
ATOM 10 O3' U B 607 34.487 117.739 97.782 1.00 44.25 O
ATOM 11 C2' U B 607 36.307 117.887 99.378 1.00 47.91 C
ATOM 12 O2' U B 607 36.365 119.260 99.040 1.00 50.09 O
ATOM 13 C1' U B 607 36.280 117.794 100.903 1.00 47.25 C
ATOM 14 N1 U B 607 37.101 116.751 101.525 1.00 46.76 N
ATOM 15 C2 U B 607 38.315 117.140 102.044 1.00 47.83 C
ATOM 16 O2 U B 607 38.761 118.271 101.908 1.00 47.24 O
ATOM 17 N3 U B 607 38.992 116.161 102.723 1.00 48.33 N
ATOM 18 C4 U B 607 38.593 114.858 102.916 1.00 47.99 C
ATOM 19 O4 U B 607 39.232 114.142 103.687 1.00 48.43 O
ATOM 20 C5 U B 607 37.353 114.519 102.290 1.00 47.54 C
ATOM 21 C6 U B 607 36.667 115.456 101.630 1.00 47.07 C
ATOM 22 P A B 608 34.065 116.724 96.621 1.00 45.14 P
ATOM 23 OP1 A B 608 32.883 117.305 95.946 1.00 44.97 O
ATOM 24 OP2 A B 608 33.991 115.355 97.177 1.00 46.02 O
ATOM 25 O5' A B 608 35.283 116.775 95.600 1.00 44.22 O
TER

Atoms:
OP1: (39.553,111.666,96.708)
OP2: (39.008,112.849,94.518)
C3': (41.017,116.768,96.656)
C1': (40.160,117.080,98.826)
C5': (38.976,115.358,95.920)
O4': (39.138,116.502,98.029)
C8: (40.414,114.705,99.731)
O2': (40.915,119.000,97.609)
C6: (42.788,114.938,102.306)
C5: (41.856,115.005,101.263)
C4: (41.624,116.249,100.710)
P: (39.735,112.818,95.805)
C4': (39.503,116.589,96.629)
C2': (41.214,117.647,97.878)
C2: (43.053,117.219,102.058)
N1: (43.384,116.087,102.684)
N3: (42.194,117.410,101.070)
N6: (43.113,113.808,102.940)
N7: (41.083,114.036,100.638)
N9: (40.699,116.050,99.713)
O5': (39.413,114.161,96.603)
O3': (41.499,117.435,95.494)
C4: (38.593,114.858,102.916)
N3: (38.992,116.161,102.723)
OP1: (33.302,113.012,101.283)
OP2: (32.000,114.840,102.568)
C2: (38.315,117.140,102.044)
C1': (36.280,117.794,100.903)
C3': (34.978,117.237,99.016)
O5': (33.398,115.406,100.594)
O4': (34.940,117.621,101.319)
C5': (32.911,116.745,100.434)
P: (32.515,114.276,101.281)
C4': (34.072,117.662,100.166)
C2': (36.307,117.887,99.378)
O2': (36.365,119.260,99.040)
N1: (37.101,116.751,101.525)
O4: (39.232,114.142,103.687)
O2: (38.761,118.271,101.908)
C6: (36.667,115.456,101.630)
C5: (37.353,114.519,102.290)
O3': (34.487,117.739,97.782)
Image (generated by PyMOL):
PyMOL image
show in jmol