Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12204:12625
Extra
PDB:
ATOM 1 O3' G A2203 43.122 13.590 57.341 1.00 39.51 O
ATOM 2 P A A2204 42.828 12.385 58.347 1.00 65.04 P
ATOM 3 OP1 A A2204 43.178 12.843 59.680 1.00 65.05 O
ATOM 4 OP2 A A2204 43.518 11.222 57.791 1.00 64.91 O
ATOM 5 O5' A A2204 41.291 12.141 58.227 1.00 65.03 O
ATOM 6 C5' A A2204 40.816 11.018 57.497 1.00 64.93 C
ATOM 7 C4' A A2204 39.415 11.248 57.013 1.00 65.02 C
ATOM 8 O4' A A2204 39.079 10.315 55.956 1.00 64.97 O
ATOM 9 C3' A A2204 38.317 11.109 58.064 1.00 64.99 C
ATOM 10 O3' A A2204 38.104 12.339 58.761 1.00 65.12 O
ATOM 11 C2' A A2204 37.092 10.665 57.253 1.00 65.01 C
ATOM 12 O2' A A2204 36.336 11.790 56.821 1.00 65.21 O
ATOM 13 C1' A A2204 37.712 9.975 56.024 1.00 64.97 C
ATOM 14 N9 A A2204 37.613 8.512 56.095 1.00 64.81 N
ATOM 15 C8 A A2204 36.912 7.703 55.240 1.00 64.81 C
ATOM 16 N7 A A2204 37.028 6.430 55.523 1.00 64.66 N
ATOM 17 C5 A A2204 37.878 6.395 56.635 1.00 64.56 C
ATOM 18 C6 A A2204 38.389 5.302 57.405 1.00 64.41 C
ATOM 19 N6 A A2204 38.081 4.013 57.133 1.00 64.32 N
ATOM 20 N1 A A2204 39.208 5.632 58.473 1.00 64.36 N
ATOM 21 C2 A A2204 39.492 6.950 58.718 1.00 64.47 C
ATOM 22 N3 A A2204 39.076 8.046 58.064 1.00 64.62 N
ATOM 23 C4 A A2204 38.261 7.693 57.013 1.00 64.65 C
ATOM 24 P A A2205 38.017 12.411 60.384 1.00 59.16 P
ATOM 25 OP1 A A2205 38.420 11.039 60.925 1.00 58.96 O
ATOM 26 OP2 A A2205 36.645 12.943 60.729 1.00 59.27 O
ATOM 27 O5' A A2205 39.141 13.539 60.734 1.00 59.27 O
TER
ATOM 1 O3' A B2624 36.791 5.067 63.517 1.00107.47 O
ATOM 2 P U B2625 37.941 5.413 62.429 1.00143.29 P
ATOM 3 OP1 U B2625 37.993 4.277 61.471 1.00143.22 O
ATOM 4 OP2 U B2625 39.182 5.774 63.177 1.00143.28 O
ATOM 5 O5' U B2625 37.331 6.704 61.715 1.00143.45 O
ATOM 6 C5' U B2625 36.015 7.135 62.053 1.00143.53 C
ATOM 7 C4' U B2625 35.492 8.242 61.166 1.00143.69 C
ATOM 8 O4' U B2625 35.615 7.851 59.766 1.00143.68 O
ATOM 9 C3' U B2625 34.012 8.573 61.388 1.00143.78 C
ATOM 10 O3' U B2625 33.802 9.976 61.262 1.00143.96 O
ATOM 11 C2' U B2625 33.312 7.828 60.249 1.00143.77 C
ATOM 12 O2' U B2625 32.055 8.354 59.862 1.00143.91 O
ATOM 13 C1' U B2625 34.342 7.928 59.130 1.00143.77 C
ATOM 14 N1 U B2625 34.231 6.832 58.119 1.00143.71 N
ATOM 15 C2 U B2625 34.697 5.548 58.406 1.00143.56 C
ATOM 16 O2 U B2625 35.241 5.225 59.447 1.00143.46 O
ATOM 17 N3 U B2625 34.527 4.610 57.418 1.00143.53 N
ATOM 18 C4 U B2625 33.939 4.785 56.194 1.00143.64 C
ATOM 19 O4 U B2625 33.876 3.822 55.422 1.00143.62 O
ATOM 20 C5 U B2625 33.466 6.122 55.979 1.00143.80 C
ATOM 21 C6 U B2625 33.613 7.073 56.912 1.00143.83 C
ATOM 22 P G B2626 33.648 10.882 62.582 1.00137.03 P
ATOM 23 OP1 G B2626 33.633 12.305 62.139 1.00137.22 O
ATOM 24 OP2 G B2626 34.708 10.449 63.513 1.00136.91 O
ATOM 25 O5' G B2626 32.198 10.447 63.172 1.00137.04 O
TER
ATOM 2 P A A2204 42.828 12.385 58.347 1.00 65.04 P
ATOM 3 OP1 A A2204 43.178 12.843 59.680 1.00 65.05 O
ATOM 4 OP2 A A2204 43.518 11.222 57.791 1.00 64.91 O
ATOM 5 O5' A A2204 41.291 12.141 58.227 1.00 65.03 O
ATOM 6 C5' A A2204 40.816 11.018 57.497 1.00 64.93 C
ATOM 7 C4' A A2204 39.415 11.248 57.013 1.00 65.02 C
ATOM 8 O4' A A2204 39.079 10.315 55.956 1.00 64.97 O
ATOM 9 C3' A A2204 38.317 11.109 58.064 1.00 64.99 C
ATOM 10 O3' A A2204 38.104 12.339 58.761 1.00 65.12 O
ATOM 11 C2' A A2204 37.092 10.665 57.253 1.00 65.01 C
ATOM 12 O2' A A2204 36.336 11.790 56.821 1.00 65.21 O
ATOM 13 C1' A A2204 37.712 9.975 56.024 1.00 64.97 C
ATOM 14 N9 A A2204 37.613 8.512 56.095 1.00 64.81 N
ATOM 15 C8 A A2204 36.912 7.703 55.240 1.00 64.81 C
ATOM 16 N7 A A2204 37.028 6.430 55.523 1.00 64.66 N
ATOM 17 C5 A A2204 37.878 6.395 56.635 1.00 64.56 C
ATOM 18 C6 A A2204 38.389 5.302 57.405 1.00 64.41 C
ATOM 19 N6 A A2204 38.081 4.013 57.133 1.00 64.32 N
ATOM 20 N1 A A2204 39.208 5.632 58.473 1.00 64.36 N
ATOM 21 C2 A A2204 39.492 6.950 58.718 1.00 64.47 C
ATOM 22 N3 A A2204 39.076 8.046 58.064 1.00 64.62 N
ATOM 23 C4 A A2204 38.261 7.693 57.013 1.00 64.65 C
ATOM 24 P A A2205 38.017 12.411 60.384 1.00 59.16 P
ATOM 25 OP1 A A2205 38.420 11.039 60.925 1.00 58.96 O
ATOM 26 OP2 A A2205 36.645 12.943 60.729 1.00 59.27 O
ATOM 27 O5' A A2205 39.141 13.539 60.734 1.00 59.27 O
TER
ATOM 1 O3' A B2624 36.791 5.067 63.517 1.00107.47 O
ATOM 2 P U B2625 37.941 5.413 62.429 1.00143.29 P
ATOM 3 OP1 U B2625 37.993 4.277 61.471 1.00143.22 O
ATOM 4 OP2 U B2625 39.182 5.774 63.177 1.00143.28 O
ATOM 5 O5' U B2625 37.331 6.704 61.715 1.00143.45 O
ATOM 6 C5' U B2625 36.015 7.135 62.053 1.00143.53 C
ATOM 7 C4' U B2625 35.492 8.242 61.166 1.00143.69 C
ATOM 8 O4' U B2625 35.615 7.851 59.766 1.00143.68 O
ATOM 9 C3' U B2625 34.012 8.573 61.388 1.00143.78 C
ATOM 10 O3' U B2625 33.802 9.976 61.262 1.00143.96 O
ATOM 11 C2' U B2625 33.312 7.828 60.249 1.00143.77 C
ATOM 12 O2' U B2625 32.055 8.354 59.862 1.00143.91 O
ATOM 13 C1' U B2625 34.342 7.928 59.130 1.00143.77 C
ATOM 14 N1 U B2625 34.231 6.832 58.119 1.00143.71 N
ATOM 15 C2 U B2625 34.697 5.548 58.406 1.00143.56 C
ATOM 16 O2 U B2625 35.241 5.225 59.447 1.00143.46 O
ATOM 17 N3 U B2625 34.527 4.610 57.418 1.00143.53 N
ATOM 18 C4 U B2625 33.939 4.785 56.194 1.00143.64 C
ATOM 19 O4 U B2625 33.876 3.822 55.422 1.00143.62 O
ATOM 20 C5 U B2625 33.466 6.122 55.979 1.00143.80 C
ATOM 21 C6 U B2625 33.613 7.073 56.912 1.00143.83 C
ATOM 22 P G B2626 33.648 10.882 62.582 1.00137.03 P
ATOM 23 OP1 G B2626 33.633 12.305 62.139 1.00137.22 O
ATOM 24 OP2 G B2626 34.708 10.449 63.513 1.00136.91 O
ATOM 25 O5' G B2626 32.198 10.447 63.172 1.00137.04 O
TER
Atoms:
OP1: (43.178,12.843,59.680)
OP2: (43.518,11.222,57.791)
C3': (38.317,11.109,58.064)
C1': (37.712,9.975,56.024)
C5': (40.816,11.018,57.497)
O4': (39.079,10.315,55.956)
C8: (36.912,7.703,55.240)
O2': (36.336,11.790,56.821)
C6: (38.389,5.302,57.405)
C5: (37.878,6.395,56.635)
C4: (38.261,7.693,57.013)
P: (42.828,12.385,58.347)
C4': (39.415,11.248,57.013)
C2': (37.092,10.665,57.253)
C2: (39.492,6.950,58.718)
N1: (39.208,5.632,58.473)
N3: (39.076,8.046,58.064)
N6: (38.081,4.013,57.133)
N7: (37.028,6.430,55.523)
N9: (37.613,8.512,56.095)
O5': (41.291,12.141,58.227)
O3': (38.104,12.339,58.761)
OP2: (43.518,11.222,57.791)
C3': (38.317,11.109,58.064)
C1': (37.712,9.975,56.024)
C5': (40.816,11.018,57.497)
O4': (39.079,10.315,55.956)
C8: (36.912,7.703,55.240)
O2': (36.336,11.790,56.821)
C6: (38.389,5.302,57.405)
C5: (37.878,6.395,56.635)
C4: (38.261,7.693,57.013)
P: (42.828,12.385,58.347)
C4': (39.415,11.248,57.013)
C2': (37.092,10.665,57.253)
C2: (39.492,6.950,58.718)
N1: (39.208,5.632,58.473)
N3: (39.076,8.046,58.064)
N6: (38.081,4.013,57.133)
N7: (37.028,6.430,55.523)
N9: (37.613,8.512,56.095)
O5': (41.291,12.141,58.227)
O3': (38.104,12.339,58.761)
C4: (33.939,4.785,56.194)
N3: (34.527,4.610,57.418)
OP1: (37.993,4.277,61.471)
OP2: (39.182,5.774,63.177)
C2: (34.697,5.548,58.406)
C1': (34.342,7.928,59.130)
C3': (34.012,8.573,61.388)
O5': (37.331,6.704,61.715)
O4': (35.615,7.851,59.766)
C5': (36.015,7.135,62.053)
P: (37.941,5.413,62.429)
C4': (35.492,8.242,61.166)
C2': (33.312,7.828,60.249)
O2': (32.055,8.354,59.862)
N1: (34.231,6.832,58.119)
O4: (33.876,3.822,55.422)
O2: (35.241,5.225,59.447)
C6: (33.613,7.073,56.912)
C5: (33.466,6.122,55.979)
O3': (33.802,9.976,61.262)
N3: (34.527,4.610,57.418)
OP1: (37.993,4.277,61.471)
OP2: (39.182,5.774,63.177)
C2: (34.697,5.548,58.406)
C1': (34.342,7.928,59.130)
C3': (34.012,8.573,61.388)
O5': (37.331,6.704,61.715)
O4': (35.615,7.851,59.766)
C5': (36.015,7.135,62.053)
P: (37.941,5.413,62.429)
C4': (35.492,8.242,61.166)
C2': (33.312,7.828,60.249)
O2': (32.055,8.354,59.862)
N1: (34.231,6.832,58.119)
O4: (33.876,3.822,55.422)
O2: (35.241,5.225,59.447)
C6: (33.613,7.073,56.912)
C5: (33.466,6.122,55.979)
O3': (33.802,9.976,61.262)
Image (generated by PyMOL):