Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2373:A2372
Extra
PDB:
ATOM 1 O3' U A2372 62.322 99.776 103.125 1.00 37.66 O
ATOM 2 P A A2373 62.520 100.111 101.589 1.00 37.95 P
ATOM 3 OP1 A A2373 62.130 98.925 100.815 1.00 37.68 O
ATOM 4 OP2 A A2373 63.881 100.685 101.440 1.00 35.46 O
ATOM 5 O5' A A2373 61.481 101.273 101.292 1.00 37.89 O
ATOM 6 C5' A A2373 60.119 101.214 101.690 1.00 35.88 C
ATOM 7 C4' A A2373 59.542 102.585 101.543 1.00 35.88 C
ATOM 8 O4' A A2373 60.473 103.489 102.203 1.00 37.51 O
ATOM 9 C3' A A2373 59.497 103.059 100.100 1.00 35.05 C
ATOM 10 O3' A A2373 58.449 104.020 100.024 1.00 33.64 O
ATOM 11 C2' A A2373 60.892 103.656 99.907 1.00 35.91 C
ATOM 12 O2' A A2373 61.052 104.571 98.845 1.00 35.69 O
ATOM 13 C1' A A2373 61.108 104.332 101.253 1.00 37.46 C
ATOM 14 N9 A A2373 62.520 104.484 101.628 1.00 38.37 N
ATOM 15 C8 A A2373 63.556 103.615 101.373 1.00 39.18 C
ATOM 16 N7 A A2373 64.708 104.004 101.863 1.00 39.62 N
ATOM 17 C5 A A2373 64.420 105.214 102.475 1.00 38.31 C
ATOM 18 C6 A A2373 65.221 106.126 103.176 1.00 37.55 C
ATOM 19 N6 A A2373 66.519 105.931 103.415 1.00 38.25 N
ATOM 20 N1 A A2373 64.634 107.254 103.638 1.00 36.97 N
ATOM 21 C2 A A2373 63.323 107.436 103.415 1.00 37.89 C
ATOM 22 N3 A A2373 62.461 106.644 102.782 1.00 37.59 N
ATOM 23 C4 A A2373 63.078 105.534 102.328 1.00 38.55 C
ATOM 24 P C A2374 57.400 103.983 98.809 1.00 31.61 P
ATOM 25 OP1 C A2374 57.629 102.778 98.000 1.00 34.38 O
ATOM 26 OP2 C A2374 57.428 105.308 98.159 1.00 29.81 O
ATOM 27 O5' C A2374 55.964 103.782 99.471 1.00 31.50 O
TER
ATOM 1 O3' C B2371 67.498 99.713 106.442 1.00 39.79 O
ATOM 2 P U B2372 67.123 100.107 104.938 1.00 39.78 P
ATOM 3 OP1 U B2372 67.295 98.903 104.105 1.00 41.10 O
ATOM 4 OP2 U B2372 67.834 101.359 104.579 1.00 39.84 O
ATOM 5 O5' U B2372 65.565 100.410 105.001 1.00 41.61 O
ATOM 6 C5' U B2372 64.624 99.346 105.206 1.00 41.15 C
ATOM 7 C4' U B2372 63.241 99.903 105.318 1.00 39.78 C
ATOM 8 O4' U B2372 63.220 100.910 106.355 1.00 40.52 O
ATOM 9 C3' U B2372 62.794 100.683 104.100 1.00 38.80 C
ATOM 10 O3' U B2372 62.322 99.776 103.125 1.00 37.66 O
ATOM 11 C2' U B2372 61.658 101.521 104.664 1.00 39.70 C
ATOM 12 O2' U B2372 60.475 100.753 104.782 1.00 40.97 O
ATOM 13 C1' U B2372 62.189 101.836 106.063 1.00 40.36 C
ATOM 14 N1 U B2372 62.702 103.201 106.231 1.00 39.52 N
ATOM 15 C2 U B2372 61.787 104.153 106.636 1.00 38.67 C
ATOM 16 O2 U B2372 60.610 103.896 106.813 1.00 39.47 O
ATOM 17 N3 U B2372 62.297 105.409 106.819 1.00 37.53 N
ATOM 18 C4 U B2372 63.606 105.808 106.618 1.00 37.99 C
ATOM 19 O4 U B2372 63.892 107.000 106.718 1.00 38.18 O
ATOM 20 C5 U B2372 64.497 104.762 106.188 1.00 38.45 C
ATOM 21 C6 U B2372 64.026 103.526 106.011 1.00 38.00 C
ATOM 22 P A B2373 62.520 100.111 101.589 1.00 37.95 P
ATOM 23 OP1 A B2373 62.130 98.925 100.815 1.00 37.68 O
ATOM 24 OP2 A B2373 63.881 100.685 101.440 1.00 35.46 O
ATOM 25 O5' A B2373 61.481 101.273 101.292 1.00 37.89 O
TER
ATOM 2 P A A2373 62.520 100.111 101.589 1.00 37.95 P
ATOM 3 OP1 A A2373 62.130 98.925 100.815 1.00 37.68 O
ATOM 4 OP2 A A2373 63.881 100.685 101.440 1.00 35.46 O
ATOM 5 O5' A A2373 61.481 101.273 101.292 1.00 37.89 O
ATOM 6 C5' A A2373 60.119 101.214 101.690 1.00 35.88 C
ATOM 7 C4' A A2373 59.542 102.585 101.543 1.00 35.88 C
ATOM 8 O4' A A2373 60.473 103.489 102.203 1.00 37.51 O
ATOM 9 C3' A A2373 59.497 103.059 100.100 1.00 35.05 C
ATOM 10 O3' A A2373 58.449 104.020 100.024 1.00 33.64 O
ATOM 11 C2' A A2373 60.892 103.656 99.907 1.00 35.91 C
ATOM 12 O2' A A2373 61.052 104.571 98.845 1.00 35.69 O
ATOM 13 C1' A A2373 61.108 104.332 101.253 1.00 37.46 C
ATOM 14 N9 A A2373 62.520 104.484 101.628 1.00 38.37 N
ATOM 15 C8 A A2373 63.556 103.615 101.373 1.00 39.18 C
ATOM 16 N7 A A2373 64.708 104.004 101.863 1.00 39.62 N
ATOM 17 C5 A A2373 64.420 105.214 102.475 1.00 38.31 C
ATOM 18 C6 A A2373 65.221 106.126 103.176 1.00 37.55 C
ATOM 19 N6 A A2373 66.519 105.931 103.415 1.00 38.25 N
ATOM 20 N1 A A2373 64.634 107.254 103.638 1.00 36.97 N
ATOM 21 C2 A A2373 63.323 107.436 103.415 1.00 37.89 C
ATOM 22 N3 A A2373 62.461 106.644 102.782 1.00 37.59 N
ATOM 23 C4 A A2373 63.078 105.534 102.328 1.00 38.55 C
ATOM 24 P C A2374 57.400 103.983 98.809 1.00 31.61 P
ATOM 25 OP1 C A2374 57.629 102.778 98.000 1.00 34.38 O
ATOM 26 OP2 C A2374 57.428 105.308 98.159 1.00 29.81 O
ATOM 27 O5' C A2374 55.964 103.782 99.471 1.00 31.50 O
TER
ATOM 1 O3' C B2371 67.498 99.713 106.442 1.00 39.79 O
ATOM 2 P U B2372 67.123 100.107 104.938 1.00 39.78 P
ATOM 3 OP1 U B2372 67.295 98.903 104.105 1.00 41.10 O
ATOM 4 OP2 U B2372 67.834 101.359 104.579 1.00 39.84 O
ATOM 5 O5' U B2372 65.565 100.410 105.001 1.00 41.61 O
ATOM 6 C5' U B2372 64.624 99.346 105.206 1.00 41.15 C
ATOM 7 C4' U B2372 63.241 99.903 105.318 1.00 39.78 C
ATOM 8 O4' U B2372 63.220 100.910 106.355 1.00 40.52 O
ATOM 9 C3' U B2372 62.794 100.683 104.100 1.00 38.80 C
ATOM 10 O3' U B2372 62.322 99.776 103.125 1.00 37.66 O
ATOM 11 C2' U B2372 61.658 101.521 104.664 1.00 39.70 C
ATOM 12 O2' U B2372 60.475 100.753 104.782 1.00 40.97 O
ATOM 13 C1' U B2372 62.189 101.836 106.063 1.00 40.36 C
ATOM 14 N1 U B2372 62.702 103.201 106.231 1.00 39.52 N
ATOM 15 C2 U B2372 61.787 104.153 106.636 1.00 38.67 C
ATOM 16 O2 U B2372 60.610 103.896 106.813 1.00 39.47 O
ATOM 17 N3 U B2372 62.297 105.409 106.819 1.00 37.53 N
ATOM 18 C4 U B2372 63.606 105.808 106.618 1.00 37.99 C
ATOM 19 O4 U B2372 63.892 107.000 106.718 1.00 38.18 O
ATOM 20 C5 U B2372 64.497 104.762 106.188 1.00 38.45 C
ATOM 21 C6 U B2372 64.026 103.526 106.011 1.00 38.00 C
ATOM 22 P A B2373 62.520 100.111 101.589 1.00 37.95 P
ATOM 23 OP1 A B2373 62.130 98.925 100.815 1.00 37.68 O
ATOM 24 OP2 A B2373 63.881 100.685 101.440 1.00 35.46 O
ATOM 25 O5' A B2373 61.481 101.273 101.292 1.00 37.89 O
TER
Atoms:
OP1: (62.130,98.925,100.815)
OP2: (63.881,100.685,101.440)
C3': (59.497,103.059,100.100)
C1': (61.108,104.332,101.253)
C5': (60.119,101.214,101.690)
O4': (60.473,103.489,102.203)
C8: (63.556,103.615,101.373)
O2': (61.052,104.571,98.845)
C6: (65.221,106.126,103.176)
C5: (64.420,105.214,102.475)
C4: (63.078,105.534,102.328)
P: (62.520,100.111,101.589)
C4': (59.542,102.585,101.543)
C2': (60.892,103.656,99.907)
C2: (63.323,107.436,103.415)
N1: (64.634,107.254,103.638)
N3: (62.461,106.644,102.782)
N6: (66.519,105.931,103.415)
N7: (64.708,104.004,101.863)
N9: (62.520,104.484,101.628)
O5': (61.481,101.273,101.292)
O3': (58.449,104.020,100.024)
OP2: (63.881,100.685,101.440)
C3': (59.497,103.059,100.100)
C1': (61.108,104.332,101.253)
C5': (60.119,101.214,101.690)
O4': (60.473,103.489,102.203)
C8: (63.556,103.615,101.373)
O2': (61.052,104.571,98.845)
C6: (65.221,106.126,103.176)
C5: (64.420,105.214,102.475)
C4: (63.078,105.534,102.328)
P: (62.520,100.111,101.589)
C4': (59.542,102.585,101.543)
C2': (60.892,103.656,99.907)
C2: (63.323,107.436,103.415)
N1: (64.634,107.254,103.638)
N3: (62.461,106.644,102.782)
N6: (66.519,105.931,103.415)
N7: (64.708,104.004,101.863)
N9: (62.520,104.484,101.628)
O5': (61.481,101.273,101.292)
O3': (58.449,104.020,100.024)
C4: (63.606,105.808,106.618)
N3: (62.297,105.409,106.819)
OP1: (67.295,98.903,104.105)
OP2: (67.834,101.359,104.579)
C2: (61.787,104.153,106.636)
C1': (62.189,101.836,106.063)
C3': (62.794,100.683,104.100)
O5': (65.565,100.410,105.001)
O4': (63.220,100.910,106.355)
C5': (64.624,99.346,105.206)
P: (67.123,100.107,104.938)
C4': (63.241,99.903,105.318)
C2': (61.658,101.521,104.664)
O2': (60.475,100.753,104.782)
N1: (62.702,103.201,106.231)
O4: (63.892,107.000,106.718)
O2: (60.610,103.896,106.813)
C6: (64.026,103.526,106.011)
C5: (64.497,104.762,106.188)
O3': (62.322,99.776,103.125)
N3: (62.297,105.409,106.819)
OP1: (67.295,98.903,104.105)
OP2: (67.834,101.359,104.579)
C2: (61.787,104.153,106.636)
C1': (62.189,101.836,106.063)
C3': (62.794,100.683,104.100)
O5': (65.565,100.410,105.001)
O4': (63.220,100.910,106.355)
C5': (64.624,99.346,105.206)
P: (67.123,100.107,104.938)
C4': (63.241,99.903,105.318)
C2': (61.658,101.521,104.664)
O2': (60.475,100.753,104.782)
N1: (62.702,103.201,106.231)
O4: (63.892,107.000,106.718)
O2: (60.610,103.896,106.813)
C6: (64.026,103.526,106.011)
C5: (64.497,104.762,106.188)
O3': (62.322,99.776,103.125)
Image (generated by PyMOL):