Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01140:01139
Extra
PDB:
ATOM 1 O3' U A1139 77.244 68.173 173.389 1.00133.06 O
ATOM 2 P A A1140 75.697 67.963 172.996 1.00133.26 P
ATOM 3 OP1 A A1140 75.613 66.681 172.249 1.00133.39 O
ATOM 4 OP2 A A1140 75.189 69.211 172.370 1.00133.43 O
ATOM 5 O5' A A1140 74.951 67.788 174.395 1.00132.62 O
ATOM 6 C5' A A1140 75.272 66.691 175.278 1.00132.07 C
ATOM 7 C4' A A1140 74.820 66.999 176.688 1.00130.75 C
ATOM 8 O4' A A1140 75.397 68.269 177.092 1.00130.97 O
ATOM 9 C3' A A1140 73.325 67.193 176.883 1.00129.79 C
ATOM 10 O3' A A1140 72.635 65.955 177.050 1.00127.31 O
ATOM 11 C2' A A1140 73.279 68.068 178.129 1.00130.41 C
ATOM 12 O2' A A1140 73.515 67.354 179.328 1.00130.74 O
ATOM 13 C1' A A1140 74.463 69.000 177.870 1.00130.74 C
ATOM 14 N9 A A1140 74.079 70.192 177.113 1.00131.24 N
ATOM 15 C8 A A1140 74.193 70.407 175.757 1.00131.52 C
ATOM 16 N7 A A1140 73.752 71.578 175.368 1.00131.72 N
ATOM 17 C5 A A1140 73.317 72.177 176.544 1.00131.53 C
ATOM 18 C6 A A1140 72.740 73.431 176.808 1.00131.36 C
ATOM 19 N6 A A1140 72.479 74.343 175.866 1.00130.89 N
ATOM 20 N1 A A1140 72.432 73.719 178.091 1.00131.11 N
ATOM 21 C2 A A1140 72.680 72.801 179.034 1.00130.92 C
ATOM 22 N3 A A1140 73.212 71.589 178.911 1.00130.82 N
ATOM 23 C4 A A1140 73.515 71.335 177.626 1.00131.26 C
ATOM 24 P C A1141 71.133 65.795 176.492 1.00124.80 P
ATOM 25 OP1 C A1141 70.569 64.558 177.083 1.00125.34 O
ATOM 26 OP2 C A1141 71.154 65.958 175.014 1.00124.29 O
ATOM 27 O5' C A1141 70.349 67.033 177.119 1.00123.18 O
TER
ATOM 1 O3' C B1138 80.621 72.883 171.055 1.00135.67 O
ATOM 2 P U B1139 79.203 72.201 170.719 1.00135.37 P
ATOM 3 OP1 U B1139 79.410 71.234 169.606 1.00135.44 O
ATOM 4 OP2 U B1139 78.203 73.291 170.564 1.00135.24 O
ATOM 5 O5' U B1139 78.847 71.384 172.040 1.00134.28 O
ATOM 6 C5' U B1139 79.570 70.188 172.380 1.00133.47 C
ATOM 7 C4' U B1139 79.147 69.677 173.738 1.00133.28 C
ATOM 8 O4' U B1139 79.453 70.668 174.756 1.00133.13 O
ATOM 9 C3' U B1139 77.666 69.409 173.950 1.00133.09 C
ATOM 10 O3' U B1139 77.244 68.173 173.389 1.00133.06 O
ATOM 11 C2' U B1139 77.569 69.407 175.468 1.00132.94 C
ATOM 12 O2' U B1139 78.041 68.207 176.051 1.00132.91 O
ATOM 13 C1' U B1139 78.525 70.546 175.826 1.00132.75 C
ATOM 14 N1 U B1139 77.821 71.826 176.010 1.00132.45 N
ATOM 15 C2 U B1139 77.400 72.146 177.293 1.00132.52 C
ATOM 16 O2 U B1139 77.602 71.428 178.261 1.00133.16 O
ATOM 17 N3 U B1139 76.734 73.340 177.403 1.00132.08 N
ATOM 18 C4 U B1139 76.451 74.229 176.392 1.00131.88 C
ATOM 19 O4 U B1139 75.839 75.264 176.655 1.00131.92 O
ATOM 20 C5 U B1139 76.920 73.834 175.098 1.00131.87 C
ATOM 21 C6 U B1139 77.573 72.677 174.954 1.00132.14 C
ATOM 22 P A B1140 75.697 67.963 172.996 1.00133.26 P
ATOM 23 OP1 A B1140 75.613 66.681 172.249 1.00133.39 O
ATOM 24 OP2 A B1140 75.189 69.211 172.370 1.00133.43 O
ATOM 25 O5' A B1140 74.951 67.788 174.395 1.00132.62 O
TER
ATOM 2 P A A1140 75.697 67.963 172.996 1.00133.26 P
ATOM 3 OP1 A A1140 75.613 66.681 172.249 1.00133.39 O
ATOM 4 OP2 A A1140 75.189 69.211 172.370 1.00133.43 O
ATOM 5 O5' A A1140 74.951 67.788 174.395 1.00132.62 O
ATOM 6 C5' A A1140 75.272 66.691 175.278 1.00132.07 C
ATOM 7 C4' A A1140 74.820 66.999 176.688 1.00130.75 C
ATOM 8 O4' A A1140 75.397 68.269 177.092 1.00130.97 O
ATOM 9 C3' A A1140 73.325 67.193 176.883 1.00129.79 C
ATOM 10 O3' A A1140 72.635 65.955 177.050 1.00127.31 O
ATOM 11 C2' A A1140 73.279 68.068 178.129 1.00130.41 C
ATOM 12 O2' A A1140 73.515 67.354 179.328 1.00130.74 O
ATOM 13 C1' A A1140 74.463 69.000 177.870 1.00130.74 C
ATOM 14 N9 A A1140 74.079 70.192 177.113 1.00131.24 N
ATOM 15 C8 A A1140 74.193 70.407 175.757 1.00131.52 C
ATOM 16 N7 A A1140 73.752 71.578 175.368 1.00131.72 N
ATOM 17 C5 A A1140 73.317 72.177 176.544 1.00131.53 C
ATOM 18 C6 A A1140 72.740 73.431 176.808 1.00131.36 C
ATOM 19 N6 A A1140 72.479 74.343 175.866 1.00130.89 N
ATOM 20 N1 A A1140 72.432 73.719 178.091 1.00131.11 N
ATOM 21 C2 A A1140 72.680 72.801 179.034 1.00130.92 C
ATOM 22 N3 A A1140 73.212 71.589 178.911 1.00130.82 N
ATOM 23 C4 A A1140 73.515 71.335 177.626 1.00131.26 C
ATOM 24 P C A1141 71.133 65.795 176.492 1.00124.80 P
ATOM 25 OP1 C A1141 70.569 64.558 177.083 1.00125.34 O
ATOM 26 OP2 C A1141 71.154 65.958 175.014 1.00124.29 O
ATOM 27 O5' C A1141 70.349 67.033 177.119 1.00123.18 O
TER
ATOM 1 O3' C B1138 80.621 72.883 171.055 1.00135.67 O
ATOM 2 P U B1139 79.203 72.201 170.719 1.00135.37 P
ATOM 3 OP1 U B1139 79.410 71.234 169.606 1.00135.44 O
ATOM 4 OP2 U B1139 78.203 73.291 170.564 1.00135.24 O
ATOM 5 O5' U B1139 78.847 71.384 172.040 1.00134.28 O
ATOM 6 C5' U B1139 79.570 70.188 172.380 1.00133.47 C
ATOM 7 C4' U B1139 79.147 69.677 173.738 1.00133.28 C
ATOM 8 O4' U B1139 79.453 70.668 174.756 1.00133.13 O
ATOM 9 C3' U B1139 77.666 69.409 173.950 1.00133.09 C
ATOM 10 O3' U B1139 77.244 68.173 173.389 1.00133.06 O
ATOM 11 C2' U B1139 77.569 69.407 175.468 1.00132.94 C
ATOM 12 O2' U B1139 78.041 68.207 176.051 1.00132.91 O
ATOM 13 C1' U B1139 78.525 70.546 175.826 1.00132.75 C
ATOM 14 N1 U B1139 77.821 71.826 176.010 1.00132.45 N
ATOM 15 C2 U B1139 77.400 72.146 177.293 1.00132.52 C
ATOM 16 O2 U B1139 77.602 71.428 178.261 1.00133.16 O
ATOM 17 N3 U B1139 76.734 73.340 177.403 1.00132.08 N
ATOM 18 C4 U B1139 76.451 74.229 176.392 1.00131.88 C
ATOM 19 O4 U B1139 75.839 75.264 176.655 1.00131.92 O
ATOM 20 C5 U B1139 76.920 73.834 175.098 1.00131.87 C
ATOM 21 C6 U B1139 77.573 72.677 174.954 1.00132.14 C
ATOM 22 P A B1140 75.697 67.963 172.996 1.00133.26 P
ATOM 23 OP1 A B1140 75.613 66.681 172.249 1.00133.39 O
ATOM 24 OP2 A B1140 75.189 69.211 172.370 1.00133.43 O
ATOM 25 O5' A B1140 74.951 67.788 174.395 1.00132.62 O
TER
Atoms:
OP1: (75.613,66.681,172.249)
OP2: (75.189,69.211,172.370)
C3': (73.325,67.193,176.883)
C1': (74.463,69.000,177.870)
C5': (75.272,66.691,175.278)
O4': (75.397,68.269,177.092)
C8: (74.193,70.407,175.757)
O2': (73.515,67.354,179.328)
C6: (72.740,73.431,176.808)
C5: (73.317,72.177,176.544)
C4: (73.515,71.335,177.626)
P: (75.697,67.963,172.996)
C4': (74.820,66.999,176.688)
C2': (73.279,68.068,178.129)
C2: (72.680,72.801,179.034)
N1: (72.432,73.719,178.091)
N3: (73.212,71.589,178.911)
N6: (72.479,74.343,175.866)
N7: (73.752,71.578,175.368)
N9: (74.079,70.192,177.113)
O5': (74.951,67.788,174.395)
O3': (72.635,65.955,177.050)
OP2: (75.189,69.211,172.370)
C3': (73.325,67.193,176.883)
C1': (74.463,69.000,177.870)
C5': (75.272,66.691,175.278)
O4': (75.397,68.269,177.092)
C8: (74.193,70.407,175.757)
O2': (73.515,67.354,179.328)
C6: (72.740,73.431,176.808)
C5: (73.317,72.177,176.544)
C4: (73.515,71.335,177.626)
P: (75.697,67.963,172.996)
C4': (74.820,66.999,176.688)
C2': (73.279,68.068,178.129)
C2: (72.680,72.801,179.034)
N1: (72.432,73.719,178.091)
N3: (73.212,71.589,178.911)
N6: (72.479,74.343,175.866)
N7: (73.752,71.578,175.368)
N9: (74.079,70.192,177.113)
O5': (74.951,67.788,174.395)
O3': (72.635,65.955,177.050)
C4: (76.451,74.229,176.392)
N3: (76.734,73.340,177.403)
OP1: (79.410,71.234,169.606)
OP2: (78.203,73.291,170.564)
C2: (77.400,72.146,177.293)
C1': (78.525,70.546,175.826)
C3': (77.666,69.409,173.950)
O5': (78.847,71.384,172.040)
O4': (79.453,70.668,174.756)
C5': (79.570,70.188,172.380)
P: (79.203,72.201,170.719)
C4': (79.147,69.677,173.738)
C2': (77.569,69.407,175.468)
O2': (78.041,68.207,176.051)
N1: (77.821,71.826,176.010)
O4: (75.839,75.264,176.655)
O2: (77.602,71.428,178.261)
C6: (77.573,72.677,174.954)
C5: (76.920,73.834,175.098)
O3': (77.244,68.173,173.389)
N3: (76.734,73.340,177.403)
OP1: (79.410,71.234,169.606)
OP2: (78.203,73.291,170.564)
C2: (77.400,72.146,177.293)
C1': (78.525,70.546,175.826)
C3': (77.666,69.409,173.950)
O5': (78.847,71.384,172.040)
O4': (79.453,70.668,174.756)
C5': (79.570,70.188,172.380)
P: (79.203,72.201,170.719)
C4': (79.147,69.677,173.738)
C2': (77.569,69.407,175.468)
O2': (78.041,68.207,176.051)
N1: (77.821,71.826,176.010)
O4: (75.839,75.264,176.655)
O2: (77.602,71.428,178.261)
C6: (77.573,72.677,174.954)
C5: (76.920,73.834,175.098)
O3': (77.244,68.173,173.389)
Image (generated by PyMOL):