ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5733:5732

Extra

PDB:
ATOM 1 O3' U A 732 111.154 -63.701 224.896 1.00 55.39 O
ATOM 2 P A A 733 109.827 -62.918 225.330 1.00 56.34 P
ATOM 3 OP1 A A 733 108.849 -63.067 224.217 1.00 56.76 O
ATOM 4 OP2 A A 733 110.227 -61.560 225.757 1.00 55.70 O
ATOM 5 O5' A A 733 109.334 -63.745 226.591 1.00 56.53 O
ATOM 6 C5' A A 733 108.783 -65.045 226.440 1.00 57.15 C
ATOM 7 C4' A A 733 108.756 -65.778 227.748 1.00 57.22 C
ATOM 8 O4' A A 733 110.079 -65.794 228.302 1.00 56.91 O
ATOM 9 C3' A A 733 107.900 -65.153 228.842 1.00 56.98 C
ATOM 10 O3' A A 733 106.532 -65.500 228.726 1.00 57.39 O
ATOM 11 C2' A A 733 108.558 -65.668 230.118 1.00 56.87 C
ATOM 12 O2' A A 733 108.150 -66.998 230.407 1.00 57.42 O
ATOM 13 C1' A A 733 110.021 -65.714 229.707 1.00 56.68 C
ATOM 14 N9 A A 733 110.743 -64.521 230.129 1.00 56.04 N
ATOM 15 C8 A A 733 110.836 -63.363 229.425 1.00 55.69 C
ATOM 16 N7 A A 733 111.524 -62.423 230.013 1.00 55.14 N
ATOM 17 C5 A A 733 111.899 -63.042 231.191 1.00 55.14 C
ATOM 18 C6 A A 733 112.671 -62.560 232.239 1.00 54.69 C
ATOM 19 N6 A A 733 113.175 -61.314 232.196 1.00 54.16 N
ATOM 20 N1 A A 733 112.892 -63.400 233.281 1.00 54.83 N
ATOM 21 C2 A A 733 112.350 -64.618 233.236 1.00 55.38 C
ATOM 22 N3 A A 733 111.614 -65.182 232.292 1.00 55.84 N
ATOM 23 C4 A A 733 111.433 -64.329 231.283 1.00 55.69 C
ATOM 24 P A A 734 105.384 -64.416 228.992 1.00 56.14 P
ATOM 25 OP1 A A 734 106.020 -63.083 229.012 1.00 55.52 O
ATOM 26 OP2 A A 734 104.642 -64.854 230.178 1.00 56.29 O
ATOM 27 O5' A A 734 104.452 -64.564 227.707 1.00 56.58 O
TER

ATOM 1 O3' G B 731 115.441 -59.517 225.193 1.00 51.35 O
ATOM 2 P U B 732 113.995 -59.722 225.875 1.00 53.30 P
ATOM 3 OP1 U B 732 113.006 -59.146 224.975 1.00 53.41 O
ATOM 4 OP2 U B 732 114.087 -59.194 227.256 1.00 52.88 O
ATOM 5 O5' U B 732 113.829 -61.308 225.901 1.00 53.89 O
ATOM 6 C5' U B 732 113.976 -62.083 224.723 1.00 54.35 C
ATOM 7 C4' U B 732 113.588 -63.511 224.976 1.00 54.89 C
ATOM 8 O4' U B 732 114.598 -64.153 225.785 1.00 54.84 O
ATOM 9 C3' U B 732 112.288 -63.694 225.742 1.00 55.05 C
ATOM 10 O3' U B 732 111.154 -63.701 224.896 1.00 55.39 O
ATOM 11 C2' U B 732 112.489 -64.988 226.511 1.00 55.38 C
ATOM 12 O2' U B 732 112.102 -66.127 225.734 1.00 56.00 O
ATOM 13 C1' U B 732 114.007 -65.008 226.718 1.00 55.10 C
ATOM 14 N1 U B 732 114.393 -64.559 228.050 1.00 54.66 N
ATOM 15 C2 U B 732 114.118 -65.385 229.090 1.00 54.86 C
ATOM 16 O2 U B 732 113.546 -66.450 228.945 1.00 55.38 O
ATOM 17 N3 U B 732 114.516 -64.950 230.309 1.00 54.46 N
ATOM 18 C4 U B 732 115.138 -63.779 230.611 1.00 53.88 C
ATOM 19 O4 U B 732 115.421 -63.541 231.790 1.00 53.58 O
ATOM 20 C5 U B 732 115.391 -62.963 229.466 1.00 53.70 C
ATOM 21 C6 U B 732 115.026 -63.370 228.248 1.00 54.09 C
ATOM 22 P A B 733 109.827 -62.918 225.330 1.00 56.34 P
ATOM 23 OP1 A B 733 108.849 -63.067 224.217 1.00 56.76 O
ATOM 24 OP2 A B 733 110.227 -61.560 225.757 1.00 55.70 O
ATOM 25 O5' A B 733 109.334 -63.745 226.591 1.00 56.53 O
TER

Atoms:
OP1: (108.849,-63.067,224.217)
OP2: (110.227,-61.560,225.757)
C3': (107.900,-65.153,228.842)
C1': (110.021,-65.714,229.707)
C5': (108.783,-65.045,226.440)
O4': (110.079,-65.794,228.302)
C8: (110.836,-63.363,229.425)
O2': (108.150,-66.998,230.407)
C6: (112.671,-62.560,232.239)
C5: (111.899,-63.042,231.191)
C4: (111.433,-64.329,231.283)
P: (109.827,-62.918,225.330)
C4': (108.756,-65.778,227.748)
C2': (108.558,-65.668,230.118)
C2: (112.350,-64.618,233.236)
N1: (112.892,-63.400,233.281)
N3: (111.614,-65.182,232.292)
N6: (113.175,-61.314,232.196)
N7: (111.524,-62.423,230.013)
N9: (110.743,-64.521,230.129)
O5': (109.334,-63.745,226.591)
O3': (106.532,-65.500,228.726)
C4: (115.138,-63.779,230.611)
N3: (114.516,-64.950,230.309)
OP1: (113.006,-59.146,224.975)
OP2: (114.087,-59.194,227.256)
C2: (114.118,-65.385,229.090)
C1': (114.007,-65.008,226.718)
C3': (112.288,-63.694,225.742)
O5': (113.829,-61.308,225.901)
O4': (114.598,-64.153,225.785)
C5': (113.976,-62.083,224.723)
P: (113.995,-59.722,225.875)
C4': (113.588,-63.511,224.976)
C2': (112.489,-64.988,226.511)
O2': (112.102,-66.127,225.734)
N1: (114.393,-64.559,228.050)
O4: (115.421,-63.541,231.790)
O2: (113.546,-66.450,228.945)
C6: (115.026,-63.370,228.248)
C5: (115.391,-62.963,229.466)
O3': (111.154,-63.701,224.896)
Image (generated by PyMOL):
PyMOL image
show in jmol