ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N8R:A222:A221

Extra

PDB:
ATOM 1 O3' U A 221 50.006 107.882 21.231 1.00 33.52 O
ATOM 2 P A A 222 49.873 108.067 19.654 1.00 33.69 P
ATOM 3 OP1 A A 222 48.922 109.188 19.424 1.00 32.09 O
ATOM 4 OP2 A A 222 49.618 106.738 19.040 1.00 33.14 O
ATOM 5 O5' A A 222 51.322 108.554 19.228 1.00 34.92 O
ATOM 6 C5' A A 222 51.841 109.827 19.681 1.00 34.55 C
ATOM 7 C4' A A 222 53.307 109.890 19.387 1.00 34.66 C
ATOM 8 O4' A A 222 53.958 108.813 20.103 1.00 35.17 O
ATOM 9 C3' A A 222 53.634 109.603 17.937 1.00 34.95 C
ATOM 10 O3' A A 222 53.480 110.745 17.111 1.00 37.34 O
ATOM 11 C2' A A 222 55.057 109.073 18.012 1.00 35.61 C
ATOM 12 O2' A A 222 56.052 110.069 18.098 1.00 36.40 O
ATOM 13 C1' A A 222 55.005 108.282 19.317 1.00 34.92 C
ATOM 14 N9 A A 222 54.731 106.871 19.069 1.00 34.29 N
ATOM 15 C8 A A 222 53.532 106.228 18.915 1.00 33.85 C
ATOM 16 N7 A A 222 53.652 104.944 18.664 1.00 35.26 N
ATOM 17 C5 A A 222 55.023 104.731 18.664 1.00 33.60 C
ATOM 18 C6 A A 222 55.798 103.584 18.461 1.00 34.39 C
ATOM 19 N6 A A 222 55.275 102.379 18.192 1.00 35.86 N
ATOM 20 N1 A A 222 57.145 103.713 18.537 1.00 33.58 N
ATOM 21 C2 A A 222 57.660 104.919 18.789 1.00 32.46 C
ATOM 22 N3 A A 222 57.032 106.071 18.992 1.00 32.45 N
ATOM 23 C4 A A 222 55.698 105.906 18.917 1.00 33.75 C
ATOM 24 P C A 223 53.648 110.594 15.523 1.00 38.16 P
ATOM 25 OP1 C A 223 53.529 111.937 14.896 1.00 39.46 O
ATOM 26 OP2 C A 223 52.775 109.483 15.057 1.00 37.63 O
ATOM 27 O5' C A 223 55.162 110.131 15.402 1.00 37.17 O
TER

ATOM 1 O3' A B 220 48.575 102.131 22.235 1.00 31.29 O
ATOM 2 P U B 221 48.917 102.997 20.936 1.00 31.92 P
ATOM 3 OP1 U B 221 47.626 103.527 20.412 1.00 31.02 O
ATOM 4 OP2 U B 221 49.834 102.233 20.038 1.00 29.33 O
ATOM 5 O5' U B 221 49.723 104.213 21.551 1.00 31.76 O
ATOM 6 C5' U B 221 49.066 105.134 22.425 1.00 33.03 C
ATOM 7 C4' U B 221 50.038 106.173 22.878 1.00 32.70 C
ATOM 8 O4' U B 221 51.077 105.545 23.659 1.00 33.37 O
ATOM 9 C3' U B 221 50.786 106.830 21.743 1.00 32.11 C
ATOM 10 O3' U B 221 50.006 107.882 21.231 1.00 33.52 O
ATOM 11 C2' U B 221 52.039 107.332 22.431 1.00 31.80 C
ATOM 12 O2' U B 221 51.792 108.518 23.152 1.00 32.18 O
ATOM 13 C1' U B 221 52.311 106.191 23.409 1.00 31.64 C
ATOM 14 N1 U B 221 53.268 105.197 22.904 1.00 30.67 N
ATOM 15 C2 U B 221 54.580 105.367 23.256 1.00 30.85 C
ATOM 16 O2 U B 221 54.960 106.304 23.923 1.00 31.97 O
ATOM 17 N3 U B 221 55.439 104.409 22.794 1.00 30.93 N
ATOM 18 C4 U B 221 55.127 103.334 22.011 1.00 30.01 C
ATOM 19 O4 U B 221 56.022 102.565 21.650 1.00 31.52 O
ATOM 20 C5 U B 221 53.745 103.233 21.672 1.00 30.24 C
ATOM 21 C6 U B 221 52.883 104.143 22.123 1.00 29.79 C
ATOM 22 P A B 222 49.873 108.067 19.654 1.00 33.69 P
ATOM 23 OP1 A B 222 48.922 109.188 19.424 1.00 32.09 O
ATOM 24 OP2 A B 222 49.618 106.738 19.040 1.00 33.14 O
ATOM 25 O5' A B 222 51.322 108.554 19.228 1.00 34.92 O
TER

Atoms:
OP1: (48.922,109.188,19.424)
OP2: (49.618,106.738,19.040)
C3': (53.634,109.603,17.937)
C1': (55.005,108.282,19.317)
C5': (51.841,109.827,19.681)
O4': (53.958,108.813,20.103)
C8: (53.532,106.228,18.915)
O2': (56.052,110.069,18.098)
C6: (55.798,103.584,18.461)
C5: (55.023,104.731,18.664)
C4: (55.698,105.906,18.917)
P: (49.873,108.067,19.654)
C4': (53.307,109.890,19.387)
C2': (55.057,109.073,18.012)
C2: (57.660,104.919,18.789)
N1: (57.145,103.713,18.537)
N3: (57.032,106.071,18.992)
N6: (55.275,102.379,18.192)
N7: (53.652,104.944,18.664)
N9: (54.731,106.871,19.069)
O5': (51.322,108.554,19.228)
O3': (53.480,110.745,17.111)
C4: (55.127,103.334,22.011)
N3: (55.439,104.409,22.794)
OP1: (47.626,103.527,20.412)
OP2: (49.834,102.233,20.038)
C2: (54.580,105.367,23.256)
C1': (52.311,106.191,23.409)
C3': (50.786,106.830,21.743)
O5': (49.723,104.213,21.551)
O4': (51.077,105.545,23.659)
C5': (49.066,105.134,22.425)
P: (48.917,102.997,20.936)
C4': (50.038,106.173,22.878)
C2': (52.039,107.332,22.431)
O2': (51.792,108.518,23.152)
N1: (53.268,105.197,22.904)
O4: (56.022,102.565,21.650)
O2: (54.960,106.304,23.923)
C6: (52.883,104.143,22.123)
C5: (53.745,103.233,21.672)
O3': (50.006,107.882,21.231)
Image (generated by PyMOL):
PyMOL image
show in jmol