Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:H22:H21
Extra
PDB:
ATOM 1 O3' U A 21 -22.895 20.579 90.875 1.00 84.32 O
ATOM 2 P A A 22 -23.244 19.139 91.577 1.00 87.26 P
ATOM 3 OP1 A A 22 -22.614 19.089 92.941 1.00 84.91 O
ATOM 4 OP2 A A 22 -24.718 18.952 91.465 1.00 83.08 O
ATOM 5 O5' A A 22 -22.470 18.096 90.644 1.00 74.34 O
ATOM 6 C5' A A 22 -21.493 17.250 91.247 1.00 62.89 C
ATOM 7 C4' A A 22 -20.299 17.044 90.346 1.00 54.35 C
ATOM 8 O4' A A 22 -19.938 18.278 89.656 1.00 54.27 O
ATOM 9 C3' A A 22 -19.052 16.552 91.049 1.00 45.36 C
ATOM 10 O3' A A 22 -19.060 15.133 91.091 1.00 48.66 O
ATOM 11 C2' A A 22 -17.957 17.104 90.161 1.00 43.74 C
ATOM 12 O2' A A 22 -17.811 16.182 89.097 1.00 43.26 O
ATOM 13 C1' A A 22 -18.540 18.416 89.603 1.00 45.99 C
ATOM 14 N9 A A 22 -18.223 19.639 90.383 1.00 44.27 N
ATOM 15 C8 A A 22 -18.828 19.951 91.574 1.00 46.22 C
ATOM 16 N7 A A 22 -18.455 21.080 92.128 1.00 47.40 N
ATOM 17 C5 A A 22 -17.533 21.584 91.236 1.00 47.07 C
ATOM 18 C6 A A 22 -16.780 22.772 91.278 1.00 50.41 C
ATOM 19 N6 A A 22 -16.865 23.645 92.286 1.00 56.31 N
ATOM 20 N1 A A 22 -15.935 23.035 90.257 1.00 49.78 N
ATOM 21 C2 A A 22 -15.881 22.124 89.282 1.00 46.56 C
ATOM 22 N3 A A 22 -16.547 20.965 89.149 1.00 44.44 N
ATOM 23 C4 A A 22 -17.386 20.726 90.159 1.00 44.61 C
ATOM 24 P A A 23 -18.176 14.132 92.044 1.00 42.36 P
ATOM 25 OP1 A A 23 -18.558 12.827 91.424 1.00 43.47 O
ATOM 26 OP2 A A 23 -18.403 14.284 93.532 1.00 42.10 O
ATOM 27 O5' A A 23 -16.654 14.465 91.699 1.00 41.08 O
TER
ATOM 1 O3' U B 20 -22.529 19.756 83.520 1.00104.09 O
ATOM 2 P U B 21 -22.772 20.883 84.673 1.00114.00 P
ATOM 3 OP1 U B 21 -24.258 21.038 84.730 1.00107.90 O
ATOM 4 OP2 U B 21 -21.911 22.062 84.331 1.00114.67 O
ATOM 5 O5' U B 21 -22.249 20.208 86.033 1.00103.05 O
ATOM 6 C5' U B 21 -23.104 20.166 87.176 1.00 88.30 C
ATOM 7 C4' U B 21 -22.393 20.414 88.491 1.00 79.70 C
ATOM 8 O4' U B 21 -21.248 21.314 88.309 1.00 75.50 O
ATOM 9 C3' U B 21 -23.282 21.047 89.573 1.00 86.12 C
ATOM 10 O3' U B 21 -22.895 20.579 90.875 1.00 84.32 O
ATOM 11 C2' U B 21 -22.907 22.527 89.435 1.00 90.96 C
ATOM 12 O2' U B 21 -23.257 23.363 90.522 1.00 96.64 O
ATOM 13 C1' U B 21 -21.391 22.370 89.253 1.00 82.61 C
ATOM 14 N1 U B 21 -20.511 23.589 89.150 1.00 80.80 N
ATOM 15 C2 U B 21 -19.988 24.153 87.966 1.00 80.02 C
ATOM 16 O2 U B 21 -20.162 23.760 86.797 1.00 81.18 O
ATOM 17 N3 U B 21 -19.205 25.276 88.233 1.00 86.71 N
ATOM 18 C4 U B 21 -18.897 25.872 89.466 1.00 92.83 C
ATOM 19 O4 U B 21 -18.181 26.879 89.536 1.00 98.36 O
ATOM 20 C5 U B 21 -19.473 25.230 90.596 1.00 87.90 C
ATOM 21 C6 U B 21 -20.224 24.154 90.380 1.00 81.11 C
ATOM 22 P A B 22 -23.244 19.139 91.577 1.00 87.26 P
ATOM 23 OP1 A B 22 -22.614 19.089 92.941 1.00 84.91 O
ATOM 24 OP2 A B 22 -24.718 18.952 91.465 1.00 83.08 O
ATOM 25 O5' A B 22 -22.470 18.096 90.644 1.00 74.34 O
TER
ATOM 2 P A A 22 -23.244 19.139 91.577 1.00 87.26 P
ATOM 3 OP1 A A 22 -22.614 19.089 92.941 1.00 84.91 O
ATOM 4 OP2 A A 22 -24.718 18.952 91.465 1.00 83.08 O
ATOM 5 O5' A A 22 -22.470 18.096 90.644 1.00 74.34 O
ATOM 6 C5' A A 22 -21.493 17.250 91.247 1.00 62.89 C
ATOM 7 C4' A A 22 -20.299 17.044 90.346 1.00 54.35 C
ATOM 8 O4' A A 22 -19.938 18.278 89.656 1.00 54.27 O
ATOM 9 C3' A A 22 -19.052 16.552 91.049 1.00 45.36 C
ATOM 10 O3' A A 22 -19.060 15.133 91.091 1.00 48.66 O
ATOM 11 C2' A A 22 -17.957 17.104 90.161 1.00 43.74 C
ATOM 12 O2' A A 22 -17.811 16.182 89.097 1.00 43.26 O
ATOM 13 C1' A A 22 -18.540 18.416 89.603 1.00 45.99 C
ATOM 14 N9 A A 22 -18.223 19.639 90.383 1.00 44.27 N
ATOM 15 C8 A A 22 -18.828 19.951 91.574 1.00 46.22 C
ATOM 16 N7 A A 22 -18.455 21.080 92.128 1.00 47.40 N
ATOM 17 C5 A A 22 -17.533 21.584 91.236 1.00 47.07 C
ATOM 18 C6 A A 22 -16.780 22.772 91.278 1.00 50.41 C
ATOM 19 N6 A A 22 -16.865 23.645 92.286 1.00 56.31 N
ATOM 20 N1 A A 22 -15.935 23.035 90.257 1.00 49.78 N
ATOM 21 C2 A A 22 -15.881 22.124 89.282 1.00 46.56 C
ATOM 22 N3 A A 22 -16.547 20.965 89.149 1.00 44.44 N
ATOM 23 C4 A A 22 -17.386 20.726 90.159 1.00 44.61 C
ATOM 24 P A A 23 -18.176 14.132 92.044 1.00 42.36 P
ATOM 25 OP1 A A 23 -18.558 12.827 91.424 1.00 43.47 O
ATOM 26 OP2 A A 23 -18.403 14.284 93.532 1.00 42.10 O
ATOM 27 O5' A A 23 -16.654 14.465 91.699 1.00 41.08 O
TER
ATOM 1 O3' U B 20 -22.529 19.756 83.520 1.00104.09 O
ATOM 2 P U B 21 -22.772 20.883 84.673 1.00114.00 P
ATOM 3 OP1 U B 21 -24.258 21.038 84.730 1.00107.90 O
ATOM 4 OP2 U B 21 -21.911 22.062 84.331 1.00114.67 O
ATOM 5 O5' U B 21 -22.249 20.208 86.033 1.00103.05 O
ATOM 6 C5' U B 21 -23.104 20.166 87.176 1.00 88.30 C
ATOM 7 C4' U B 21 -22.393 20.414 88.491 1.00 79.70 C
ATOM 8 O4' U B 21 -21.248 21.314 88.309 1.00 75.50 O
ATOM 9 C3' U B 21 -23.282 21.047 89.573 1.00 86.12 C
ATOM 10 O3' U B 21 -22.895 20.579 90.875 1.00 84.32 O
ATOM 11 C2' U B 21 -22.907 22.527 89.435 1.00 90.96 C
ATOM 12 O2' U B 21 -23.257 23.363 90.522 1.00 96.64 O
ATOM 13 C1' U B 21 -21.391 22.370 89.253 1.00 82.61 C
ATOM 14 N1 U B 21 -20.511 23.589 89.150 1.00 80.80 N
ATOM 15 C2 U B 21 -19.988 24.153 87.966 1.00 80.02 C
ATOM 16 O2 U B 21 -20.162 23.760 86.797 1.00 81.18 O
ATOM 17 N3 U B 21 -19.205 25.276 88.233 1.00 86.71 N
ATOM 18 C4 U B 21 -18.897 25.872 89.466 1.00 92.83 C
ATOM 19 O4 U B 21 -18.181 26.879 89.536 1.00 98.36 O
ATOM 20 C5 U B 21 -19.473 25.230 90.596 1.00 87.90 C
ATOM 21 C6 U B 21 -20.224 24.154 90.380 1.00 81.11 C
ATOM 22 P A B 22 -23.244 19.139 91.577 1.00 87.26 P
ATOM 23 OP1 A B 22 -22.614 19.089 92.941 1.00 84.91 O
ATOM 24 OP2 A B 22 -24.718 18.952 91.465 1.00 83.08 O
ATOM 25 O5' A B 22 -22.470 18.096 90.644 1.00 74.34 O
TER
Atoms:
OP1: (-22.614,19.089,92.941)
OP2: (-24.718,18.952,91.465)
C3': (-19.052,16.552,91.049)
C1': (-18.540,18.416,89.603)
C5': (-21.493,17.250,91.247)
O4': (-19.938,18.278,89.656)
C8: (-18.828,19.951,91.574)
O2': (-17.811,16.182,89.097)
C6: (-16.780,22.772,91.278)
C5: (-17.533,21.584,91.236)
C4: (-17.386,20.726,90.159)
P: (-23.244,19.139,91.577)
C4': (-20.299,17.044,90.346)
C2': (-17.957,17.104,90.161)
C2: (-15.881,22.124,89.282)
N1: (-15.935,23.035,90.257)
N3: (-16.547,20.965,89.149)
N6: (-16.865,23.645,92.286)
N7: (-18.455,21.080,92.128)
N9: (-18.223,19.639,90.383)
O5': (-22.470,18.096,90.644)
O3': (-19.060,15.133,91.091)
OP2: (-24.718,18.952,91.465)
C3': (-19.052,16.552,91.049)
C1': (-18.540,18.416,89.603)
C5': (-21.493,17.250,91.247)
O4': (-19.938,18.278,89.656)
C8: (-18.828,19.951,91.574)
O2': (-17.811,16.182,89.097)
C6: (-16.780,22.772,91.278)
C5: (-17.533,21.584,91.236)
C4: (-17.386,20.726,90.159)
P: (-23.244,19.139,91.577)
C4': (-20.299,17.044,90.346)
C2': (-17.957,17.104,90.161)
C2: (-15.881,22.124,89.282)
N1: (-15.935,23.035,90.257)
N3: (-16.547,20.965,89.149)
N6: (-16.865,23.645,92.286)
N7: (-18.455,21.080,92.128)
N9: (-18.223,19.639,90.383)
O5': (-22.470,18.096,90.644)
O3': (-19.060,15.133,91.091)
C4: (-18.897,25.872,89.466)
N3: (-19.205,25.276,88.233)
OP1: (-24.258,21.038,84.730)
OP2: (-21.911,22.062,84.331)
C2: (-19.988,24.153,87.966)
C1': (-21.391,22.370,89.253)
C3': (-23.282,21.047,89.573)
O5': (-22.249,20.208,86.033)
O4': (-21.248,21.314,88.309)
C5': (-23.104,20.166,87.176)
P: (-22.772,20.883,84.673)
C4': (-22.393,20.414,88.491)
C2': (-22.907,22.527,89.435)
O2': (-23.257,23.363,90.522)
N1: (-20.511,23.589,89.150)
O4: (-18.181,26.879,89.536)
O2: (-20.162,23.760,86.797)
C6: (-20.224,24.154,90.380)
C5: (-19.473,25.230,90.596)
O3': (-22.895,20.579,90.875)
N3: (-19.205,25.276,88.233)
OP1: (-24.258,21.038,84.730)
OP2: (-21.911,22.062,84.331)
C2: (-19.988,24.153,87.966)
C1': (-21.391,22.370,89.253)
C3': (-23.282,21.047,89.573)
O5': (-22.249,20.208,86.033)
O4': (-21.248,21.314,88.309)
C5': (-23.104,20.166,87.176)
P: (-22.772,20.883,84.673)
C4': (-22.393,20.414,88.491)
C2': (-22.907,22.527,89.435)
O2': (-23.257,23.363,90.522)
N1: (-20.511,23.589,89.150)
O4: (-18.181,26.879,89.536)
O2: (-20.162,23.760,86.797)
C6: (-20.224,24.154,90.380)
C5: (-19.473,25.230,90.596)
O3': (-22.895,20.579,90.875)
Image (generated by PyMOL):