Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0222:0221
Extra
PDB:
ATOM 1 O3' U A 221 49.920 107.615 20.899 1.00 38.61 O
ATOM 2 P A A 222 49.794 107.739 19.311 1.00 38.48 P
ATOM 3 OP1 A A 222 48.794 108.814 19.081 1.00 36.31 O
ATOM 4 OP2 A A 222 49.571 106.385 18.747 1.00 37.00 O
ATOM 5 O5' A A 222 51.241 108.223 18.849 1.00 38.22 O
ATOM 6 C5' A A 222 51.765 109.501 19.270 1.00 38.69 C
ATOM 7 C4' A A 222 53.251 109.557 19.032 1.00 38.40 C
ATOM 8 O4' A A 222 53.892 108.517 19.812 1.00 39.00 O
ATOM 9 C3' A A 222 53.681 109.258 17.610 1.00 40.15 C
ATOM 10 O3' A A 222 53.571 110.396 16.772 1.00 43.33 O
ATOM 11 C2' A A 222 55.113 108.773 17.787 1.00 38.39 C
ATOM 12 O2' A A 222 56.068 109.802 17.936 1.00 39.39 O
ATOM 13 C1' A A 222 54.992 107.988 19.091 1.00 37.65 C
ATOM 14 N9 A A 222 54.731 106.578 18.837 1.00 34.72 N
ATOM 15 C8 A A 222 53.519 105.962 18.664 1.00 34.38 C
ATOM 16 N7 A A 222 53.612 104.678 18.422 1.00 35.36 N
ATOM 17 C5 A A 222 54.978 104.433 18.446 1.00 33.08 C
ATOM 18 C6 A A 222 55.724 103.268 18.266 1.00 32.84 C
ATOM 19 N6 A A 222 55.176 102.080 17.999 1.00 34.50 N
ATOM 20 N1 A A 222 57.070 103.361 18.366 1.00 32.67 N
ATOM 21 C2 A A 222 57.610 104.556 18.622 1.00 31.52 C
ATOM 22 N3 A A 222 57.012 105.724 18.806 1.00 30.98 N
ATOM 23 C4 A A 222 55.679 105.592 18.706 1.00 33.19 C
ATOM 24 P C A 223 53.771 110.231 15.189 1.00 47.05 P
ATOM 25 OP1 C A 223 53.582 111.585 14.609 1.00 46.08 O
ATOM 26 OP2 C A 223 52.941 109.099 14.701 1.00 46.35 O
ATOM 27 O5' C A 223 55.302 109.807 15.069 1.00 46.47 O
TER
ATOM 1 O3' A B 220 48.555 101.870 22.075 1.00 40.08 O
ATOM 2 P U B 221 48.814 102.665 20.708 1.00 39.90 P
ATOM 3 OP1 U B 221 47.471 103.055 20.226 1.00 39.35 O
ATOM 4 OP2 U B 221 49.722 101.884 19.830 1.00 35.60 O
ATOM 5 O5' U B 221 49.580 103.976 21.185 1.00 40.69 O
ATOM 6 C5' U B 221 48.974 104.873 22.139 1.00 39.11 C
ATOM 7 C4' U B 221 49.971 105.909 22.580 1.00 38.11 C
ATOM 8 O4' U B 221 51.026 105.289 23.352 1.00 39.44 O
ATOM 9 C3' U B 221 50.716 106.590 21.454 1.00 38.06 C
ATOM 10 O3' U B 221 49.920 107.615 20.899 1.00 38.61 O
ATOM 11 C2' U B 221 51.948 107.126 22.162 1.00 37.84 C
ATOM 12 O2' U B 221 51.665 108.296 22.902 1.00 39.11 O
ATOM 13 C1' U B 221 52.239 105.990 23.142 1.00 37.89 C
ATOM 14 N1 U B 221 53.257 105.041 22.673 1.00 36.57 N
ATOM 15 C2 U B 221 54.575 105.289 23.021 1.00 38.39 C
ATOM 16 O2 U B 221 54.923 106.259 23.686 1.00 39.89 O
ATOM 17 N3 U B 221 55.475 104.361 22.565 1.00 36.58 N
ATOM 18 C4 U B 221 55.202 103.245 21.816 1.00 34.64 C
ATOM 19 O4 U B 221 56.122 102.504 21.488 1.00 37.18 O
ATOM 20 C5 U B 221 53.827 103.063 21.495 1.00 34.67 C
ATOM 21 C6 U B 221 52.923 103.945 21.922 1.00 35.34 C
ATOM 22 P A B 222 49.794 107.739 19.311 1.00 38.48 P
ATOM 23 OP1 A B 222 48.794 108.814 19.081 1.00 36.31 O
ATOM 24 OP2 A B 222 49.571 106.385 18.747 1.00 37.00 O
ATOM 25 O5' A B 222 51.241 108.223 18.849 1.00 38.22 O
TER
ATOM 2 P A A 222 49.794 107.739 19.311 1.00 38.48 P
ATOM 3 OP1 A A 222 48.794 108.814 19.081 1.00 36.31 O
ATOM 4 OP2 A A 222 49.571 106.385 18.747 1.00 37.00 O
ATOM 5 O5' A A 222 51.241 108.223 18.849 1.00 38.22 O
ATOM 6 C5' A A 222 51.765 109.501 19.270 1.00 38.69 C
ATOM 7 C4' A A 222 53.251 109.557 19.032 1.00 38.40 C
ATOM 8 O4' A A 222 53.892 108.517 19.812 1.00 39.00 O
ATOM 9 C3' A A 222 53.681 109.258 17.610 1.00 40.15 C
ATOM 10 O3' A A 222 53.571 110.396 16.772 1.00 43.33 O
ATOM 11 C2' A A 222 55.113 108.773 17.787 1.00 38.39 C
ATOM 12 O2' A A 222 56.068 109.802 17.936 1.00 39.39 O
ATOM 13 C1' A A 222 54.992 107.988 19.091 1.00 37.65 C
ATOM 14 N9 A A 222 54.731 106.578 18.837 1.00 34.72 N
ATOM 15 C8 A A 222 53.519 105.962 18.664 1.00 34.38 C
ATOM 16 N7 A A 222 53.612 104.678 18.422 1.00 35.36 N
ATOM 17 C5 A A 222 54.978 104.433 18.446 1.00 33.08 C
ATOM 18 C6 A A 222 55.724 103.268 18.266 1.00 32.84 C
ATOM 19 N6 A A 222 55.176 102.080 17.999 1.00 34.50 N
ATOM 20 N1 A A 222 57.070 103.361 18.366 1.00 32.67 N
ATOM 21 C2 A A 222 57.610 104.556 18.622 1.00 31.52 C
ATOM 22 N3 A A 222 57.012 105.724 18.806 1.00 30.98 N
ATOM 23 C4 A A 222 55.679 105.592 18.706 1.00 33.19 C
ATOM 24 P C A 223 53.771 110.231 15.189 1.00 47.05 P
ATOM 25 OP1 C A 223 53.582 111.585 14.609 1.00 46.08 O
ATOM 26 OP2 C A 223 52.941 109.099 14.701 1.00 46.35 O
ATOM 27 O5' C A 223 55.302 109.807 15.069 1.00 46.47 O
TER
ATOM 1 O3' A B 220 48.555 101.870 22.075 1.00 40.08 O
ATOM 2 P U B 221 48.814 102.665 20.708 1.00 39.90 P
ATOM 3 OP1 U B 221 47.471 103.055 20.226 1.00 39.35 O
ATOM 4 OP2 U B 221 49.722 101.884 19.830 1.00 35.60 O
ATOM 5 O5' U B 221 49.580 103.976 21.185 1.00 40.69 O
ATOM 6 C5' U B 221 48.974 104.873 22.139 1.00 39.11 C
ATOM 7 C4' U B 221 49.971 105.909 22.580 1.00 38.11 C
ATOM 8 O4' U B 221 51.026 105.289 23.352 1.00 39.44 O
ATOM 9 C3' U B 221 50.716 106.590 21.454 1.00 38.06 C
ATOM 10 O3' U B 221 49.920 107.615 20.899 1.00 38.61 O
ATOM 11 C2' U B 221 51.948 107.126 22.162 1.00 37.84 C
ATOM 12 O2' U B 221 51.665 108.296 22.902 1.00 39.11 O
ATOM 13 C1' U B 221 52.239 105.990 23.142 1.00 37.89 C
ATOM 14 N1 U B 221 53.257 105.041 22.673 1.00 36.57 N
ATOM 15 C2 U B 221 54.575 105.289 23.021 1.00 38.39 C
ATOM 16 O2 U B 221 54.923 106.259 23.686 1.00 39.89 O
ATOM 17 N3 U B 221 55.475 104.361 22.565 1.00 36.58 N
ATOM 18 C4 U B 221 55.202 103.245 21.816 1.00 34.64 C
ATOM 19 O4 U B 221 56.122 102.504 21.488 1.00 37.18 O
ATOM 20 C5 U B 221 53.827 103.063 21.495 1.00 34.67 C
ATOM 21 C6 U B 221 52.923 103.945 21.922 1.00 35.34 C
ATOM 22 P A B 222 49.794 107.739 19.311 1.00 38.48 P
ATOM 23 OP1 A B 222 48.794 108.814 19.081 1.00 36.31 O
ATOM 24 OP2 A B 222 49.571 106.385 18.747 1.00 37.00 O
ATOM 25 O5' A B 222 51.241 108.223 18.849 1.00 38.22 O
TER
Atoms:
OP1: (48.794,108.814,19.081)
OP2: (49.571,106.385,18.747)
C3': (53.681,109.258,17.610)
C1': (54.992,107.988,19.091)
C5': (51.765,109.501,19.270)
O4': (53.892,108.517,19.812)
C8: (53.519,105.962,18.664)
O2': (56.068,109.802,17.936)
C6: (55.724,103.268,18.266)
C5: (54.978,104.433,18.446)
C4: (55.679,105.592,18.706)
P: (49.794,107.739,19.311)
C4': (53.251,109.557,19.032)
C2': (55.113,108.773,17.787)
C2: (57.610,104.556,18.622)
N1: (57.070,103.361,18.366)
N3: (57.012,105.724,18.806)
N6: (55.176,102.080,17.999)
N7: (53.612,104.678,18.422)
N9: (54.731,106.578,18.837)
O5': (51.241,108.223,18.849)
O3': (53.571,110.396,16.772)
OP2: (49.571,106.385,18.747)
C3': (53.681,109.258,17.610)
C1': (54.992,107.988,19.091)
C5': (51.765,109.501,19.270)
O4': (53.892,108.517,19.812)
C8: (53.519,105.962,18.664)
O2': (56.068,109.802,17.936)
C6: (55.724,103.268,18.266)
C5: (54.978,104.433,18.446)
C4: (55.679,105.592,18.706)
P: (49.794,107.739,19.311)
C4': (53.251,109.557,19.032)
C2': (55.113,108.773,17.787)
C2: (57.610,104.556,18.622)
N1: (57.070,103.361,18.366)
N3: (57.012,105.724,18.806)
N6: (55.176,102.080,17.999)
N7: (53.612,104.678,18.422)
N9: (54.731,106.578,18.837)
O5': (51.241,108.223,18.849)
O3': (53.571,110.396,16.772)
C4: (55.202,103.245,21.816)
N3: (55.475,104.361,22.565)
OP1: (47.471,103.055,20.226)
OP2: (49.722,101.884,19.830)
C2: (54.575,105.289,23.021)
C1': (52.239,105.990,23.142)
C3': (50.716,106.590,21.454)
O5': (49.580,103.976,21.185)
O4': (51.026,105.289,23.352)
C5': (48.974,104.873,22.139)
P: (48.814,102.665,20.708)
C4': (49.971,105.909,22.580)
C2': (51.948,107.126,22.162)
O2': (51.665,108.296,22.902)
N1: (53.257,105.041,22.673)
O4: (56.122,102.504,21.488)
O2: (54.923,106.259,23.686)
C6: (52.923,103.945,21.922)
C5: (53.827,103.063,21.495)
O3': (49.920,107.615,20.899)
N3: (55.475,104.361,22.565)
OP1: (47.471,103.055,20.226)
OP2: (49.722,101.884,19.830)
C2: (54.575,105.289,23.021)
C1': (52.239,105.990,23.142)
C3': (50.716,106.590,21.454)
O5': (49.580,103.976,21.185)
O4': (51.026,105.289,23.352)
C5': (48.974,104.873,22.139)
P: (48.814,102.665,20.708)
C4': (49.971,105.909,22.580)
C2': (51.948,107.126,22.162)
O2': (51.665,108.296,22.902)
N1: (53.257,105.041,22.673)
O4: (56.122,102.504,21.488)
O2: (54.923,106.259,23.686)
C6: (52.923,103.945,21.922)
C5: (53.827,103.063,21.495)
O3': (49.920,107.615,20.899)
Image (generated by PyMOL):