ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01964:01729

Extra

PDB:
ATOM 1 O3' U A1963 114.196 137.741 103.589 1.00 68.09 O
ATOM 2 P A A1964 112.923 138.561 104.134 1.00 65.08 P
ATOM 3 OP1 A A1964 112.945 138.522 105.615 1.00 65.05 O
ATOM 4 OP2 A A1964 111.718 138.075 103.407 1.00 67.23 O
ATOM 5 O5' A A1964 113.213 140.055 103.661 1.00 61.68 O
ATOM 6 C5' A A1964 114.280 140.831 104.235 1.00 54.93 C
ATOM 7 C4' A A1964 114.748 141.880 103.254 1.00 50.73 C
ATOM 8 O4' A A1964 115.429 141.238 102.145 1.00 48.53 O
ATOM 9 C3' A A1964 113.650 142.699 102.598 1.00 48.75 C
ATOM 10 O3' A A1964 113.219 143.773 103.429 1.00 49.30 O
ATOM 11 C2' A A1964 114.325 143.173 101.319 1.00 49.00 C
ATOM 12 O2' A A1964 115.186 144.275 101.520 1.00 45.86 O
ATOM 13 C1' A A1964 115.151 141.938 100.940 1.00 47.36 C
ATOM 14 N9 A A1964 114.427 141.034 100.042 1.00 44.55 N
ATOM 15 C8 A A1964 113.837 139.837 100.371 1.00 43.64 C
ATOM 16 N7 A A1964 113.222 139.258 99.371 1.00 42.86 N
ATOM 17 C5 A A1964 113.425 140.126 98.310 1.00 43.37 C
ATOM 18 C6 A A1964 113.016 140.084 96.971 1.00 44.22 C
ATOM 19 N6 A A1964 112.297 139.085 96.449 1.00 43.34 N
ATOM 20 N1 A A1964 113.376 141.113 96.172 1.00 43.96 N
ATOM 21 C2 A A1964 114.108 142.099 96.694 1.00 41.50 C
ATOM 22 N3 A A1964 114.559 142.245 97.932 1.00 41.92 N
ATOM 23 C4 A A1964 114.175 141.216 98.703 1.00 41.75 C
ATOM 24 P A A1965 111.684 144.253 103.387 1.00 47.93 P
ATOM 25 OP1 A A1965 111.550 145.489 104.195 1.00 50.68 O
ATOM 26 OP2 A A1965 110.808 143.098 103.680 1.00 49.96 O
ATOM 27 O5' A A1965 111.462 144.660 101.867 1.00 46.36 O
TER

ATOM 1 O3' U B1728 120.141 140.845 101.998 1.00 60.22 O
ATOM 2 P U B1729 121.638 140.742 101.426 1.00 61.19 P
ATOM 3 OP1 U B1729 121.866 139.323 101.048 1.00 61.65 O
ATOM 4 OP2 U B1729 122.565 141.399 102.384 1.00 61.30 O
ATOM 5 O5' U B1729 121.590 141.622 100.100 1.00 57.71 O
ATOM 6 C5' U B1729 122.593 141.473 99.087 1.00 58.11 C
ATOM 7 C4' U B1729 122.054 141.893 97.739 1.00 57.59 C
ATOM 8 O4' U B1729 121.034 140.950 97.304 1.00 57.33 O
ATOM 9 C3' U B1729 121.424 143.280 97.653 1.00 57.31 C
ATOM 10 O3' U B1729 121.729 143.842 96.384 1.00 59.17 O
ATOM 11 C2' U B1729 119.926 142.976 97.732 1.00 58.34 C
ATOM 12 O2' U B1729 119.123 143.931 97.067 1.00 59.55 O
ATOM 13 C1' U B1729 119.841 141.647 96.983 1.00 56.73 C
ATOM 14 N1 U B1729 118.695 140.793 97.346 1.00 52.88 N
ATOM 15 C2 U B1729 117.829 140.379 96.332 1.00 51.14 C
ATOM 16 O2 U B1729 117.926 140.752 95.174 1.00 50.33 O
ATOM 17 N3 U B1729 116.844 139.506 96.733 1.00 50.00 N
ATOM 18 C4 U B1729 116.629 139.022 98.014 1.00 51.06 C
ATOM 19 O4 U B1729 115.725 138.210 98.215 1.00 51.09 O
ATOM 20 C5 U B1729 117.523 139.538 99.006 1.00 50.63 C
ATOM 21 C6 U B1729 118.499 140.382 98.649 1.00 51.91 C
ATOM 22 P C B1730 122.994 144.822 96.227 1.00 59.51 P
ATOM 23 OP1 C B1730 122.965 145.367 94.838 1.00 55.81 O
ATOM 24 OP2 C B1730 124.179 144.061 96.690 1.00 60.80 O
ATOM 25 O5' C B1730 122.717 146.012 97.257 1.00 59.94 O
TER

Atoms:
OP1: (112.945,138.522,105.615)
OP2: (111.718,138.075,103.407)
C3': (113.650,142.699,102.598)
C1': (115.151,141.938,100.940)
C5': (114.280,140.831,104.235)
O4': (115.429,141.238,102.145)
C8: (113.837,139.837,100.371)
O2': (115.186,144.275,101.520)
C6: (113.016,140.084,96.971)
C5: (113.425,140.126,98.310)
C4: (114.175,141.216,98.703)
P: (112.923,138.561,104.134)
C4': (114.748,141.880,103.254)
C2': (114.325,143.173,101.319)
C2: (114.108,142.099,96.694)
N1: (113.376,141.113,96.172)
N3: (114.559,142.245,97.932)
N6: (112.297,139.085,96.449)
N7: (113.222,139.258,99.371)
N9: (114.427,141.034,100.042)
O5': (113.213,140.055,103.661)
O3': (113.219,143.773,103.429)
C4: (116.629,139.022,98.014)
N3: (116.844,139.506,96.733)
OP1: (121.866,139.323,101.048)
OP2: (122.565,141.399,102.384)
C2: (117.829,140.379,96.332)
C1': (119.841,141.647,96.983)
C3': (121.424,143.280,97.653)
O5': (121.590,141.622,100.100)
O4': (121.034,140.950,97.304)
C5': (122.593,141.473,99.087)
P: (121.638,140.742,101.426)
C4': (122.054,141.893,97.739)
C2': (119.926,142.976,97.732)
O2': (119.123,143.931,97.067)
N1: (118.695,140.793,97.346)
O4: (115.725,138.210,98.215)
O2: (117.926,140.752,95.174)
C6: (118.499,140.382,98.649)
C5: (117.523,139.538,99.006)
O3': (121.729,143.842,96.384)
Image (generated by PyMOL):
PyMOL image
show in jmol