Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02373:02372
Extra
PDB:
ATOM 1 O3' U A2372 62.282 99.539 102.671 1.00 36.54 O
ATOM 2 P A A2373 62.612 99.751 101.115 1.00 37.75 P
ATOM 3 OP1 A A2373 62.245 98.488 100.424 1.00 37.73 O
ATOM 4 OP2 A A2373 63.986 100.304 100.966 1.00 35.64 O
ATOM 5 O5' A A2373 61.587 100.872 100.651 1.00 36.66 O
ATOM 6 C5' A A2373 60.227 100.859 101.101 1.00 35.97 C
ATOM 7 C4' A A2373 59.650 102.246 101.004 1.00 35.75 C
ATOM 8 O4' A A2373 60.511 103.160 101.741 1.00 35.49 O
ATOM 9 C3' A A2373 59.571 102.809 99.594 1.00 33.72 C
ATOM 10 O3' A A2373 58.467 103.722 99.546 1.00 32.90 O
ATOM 11 C2' A A2373 60.928 103.492 99.444 1.00 33.40 C
ATOM 12 O2' A A2373 60.962 104.490 98.447 1.00 32.17 O
ATOM 13 C1' A A2373 61.131 104.067 100.849 1.00 34.69 C
ATOM 14 N9 A A2373 62.527 104.217 101.271 1.00 34.47 N
ATOM 15 C8 A A2373 63.553 103.318 101.124 1.00 34.69 C
ATOM 16 N7 A A2373 64.692 103.729 101.621 1.00 34.71 N
ATOM 17 C5 A A2373 64.401 104.986 102.129 1.00 35.31 C
ATOM 18 C6 A A2373 65.193 105.949 102.792 1.00 36.43 C
ATOM 19 N6 A A2373 66.487 105.779 103.078 1.00 36.63 N
ATOM 20 N1 A A2373 64.599 107.104 103.161 1.00 36.68 N
ATOM 21 C2 A A2373 63.297 107.268 102.886 1.00 38.13 C
ATOM 22 N3 A A2373 62.449 106.437 102.276 1.00 37.66 N
ATOM 23 C4 A A2373 63.071 105.301 101.918 1.00 35.03 C
ATOM 24 P C A2374 57.427 103.640 98.332 1.00 32.10 P
ATOM 25 OP1 C A2374 57.643 102.320 97.692 1.00 33.86 O
ATOM 26 OP2 C A2374 57.538 104.883 97.532 1.00 31.04 O
ATOM 27 O5' C A2374 55.960 103.606 98.952 1.00 30.75 O
TER
ATOM 1 O3' C B2371 67.464 99.551 105.989 1.00 33.33 O
ATOM 2 P U B2372 67.116 99.957 104.479 1.00 34.72 P
ATOM 3 OP1 U B2372 67.368 98.742 103.666 1.00 36.02 O
ATOM 4 OP2 U B2372 67.805 101.221 104.136 1.00 35.03 O
ATOM 5 O5' U B2372 65.548 100.236 104.508 1.00 36.74 O
ATOM 6 C5' U B2372 64.608 99.190 104.824 1.00 35.55 C
ATOM 7 C4' U B2372 63.209 99.749 104.883 1.00 35.38 C
ATOM 8 O4' U B2372 63.155 100.786 105.890 1.00 36.26 O
ATOM 9 C3' U B2372 62.755 100.475 103.629 1.00 35.99 C
ATOM 10 O3' U B2372 62.282 99.539 102.671 1.00 36.54 O
ATOM 11 C2' U B2372 61.629 101.363 104.147 1.00 35.91 C
ATOM 12 O2' U B2372 60.399 100.676 104.260 1.00 36.63 O
ATOM 13 C1' U B2372 62.129 101.707 105.554 1.00 36.36 C
ATOM 14 N1 U B2372 62.606 103.085 105.772 1.00 34.72 N
ATOM 15 C2 U B2372 61.656 104.052 106.054 1.00 34.88 C
ATOM 16 O2 U B2372 60.459 103.820 106.088 1.00 35.79 O
ATOM 17 N3 U B2372 62.156 105.306 106.289 1.00 34.74 N
ATOM 18 C4 U B2372 63.473 105.694 106.267 1.00 34.23 C
ATOM 19 O4 U B2372 63.766 106.860 106.546 1.00 32.50 O
ATOM 20 C5 U B2372 64.394 104.647 105.947 1.00 34.75 C
ATOM 21 C6 U B2372 63.940 103.410 105.715 1.00 34.66 C
ATOM 22 P A B2373 62.612 99.751 101.115 1.00 37.75 P
ATOM 23 OP1 A B2373 62.245 98.488 100.424 1.00 37.73 O
ATOM 24 OP2 A B2373 63.986 100.304 100.966 1.00 35.64 O
ATOM 25 O5' A B2373 61.587 100.872 100.651 1.00 36.66 O
TER
ATOM 2 P A A2373 62.612 99.751 101.115 1.00 37.75 P
ATOM 3 OP1 A A2373 62.245 98.488 100.424 1.00 37.73 O
ATOM 4 OP2 A A2373 63.986 100.304 100.966 1.00 35.64 O
ATOM 5 O5' A A2373 61.587 100.872 100.651 1.00 36.66 O
ATOM 6 C5' A A2373 60.227 100.859 101.101 1.00 35.97 C
ATOM 7 C4' A A2373 59.650 102.246 101.004 1.00 35.75 C
ATOM 8 O4' A A2373 60.511 103.160 101.741 1.00 35.49 O
ATOM 9 C3' A A2373 59.571 102.809 99.594 1.00 33.72 C
ATOM 10 O3' A A2373 58.467 103.722 99.546 1.00 32.90 O
ATOM 11 C2' A A2373 60.928 103.492 99.444 1.00 33.40 C
ATOM 12 O2' A A2373 60.962 104.490 98.447 1.00 32.17 O
ATOM 13 C1' A A2373 61.131 104.067 100.849 1.00 34.69 C
ATOM 14 N9 A A2373 62.527 104.217 101.271 1.00 34.47 N
ATOM 15 C8 A A2373 63.553 103.318 101.124 1.00 34.69 C
ATOM 16 N7 A A2373 64.692 103.729 101.621 1.00 34.71 N
ATOM 17 C5 A A2373 64.401 104.986 102.129 1.00 35.31 C
ATOM 18 C6 A A2373 65.193 105.949 102.792 1.00 36.43 C
ATOM 19 N6 A A2373 66.487 105.779 103.078 1.00 36.63 N
ATOM 20 N1 A A2373 64.599 107.104 103.161 1.00 36.68 N
ATOM 21 C2 A A2373 63.297 107.268 102.886 1.00 38.13 C
ATOM 22 N3 A A2373 62.449 106.437 102.276 1.00 37.66 N
ATOM 23 C4 A A2373 63.071 105.301 101.918 1.00 35.03 C
ATOM 24 P C A2374 57.427 103.640 98.332 1.00 32.10 P
ATOM 25 OP1 C A2374 57.643 102.320 97.692 1.00 33.86 O
ATOM 26 OP2 C A2374 57.538 104.883 97.532 1.00 31.04 O
ATOM 27 O5' C A2374 55.960 103.606 98.952 1.00 30.75 O
TER
ATOM 1 O3' C B2371 67.464 99.551 105.989 1.00 33.33 O
ATOM 2 P U B2372 67.116 99.957 104.479 1.00 34.72 P
ATOM 3 OP1 U B2372 67.368 98.742 103.666 1.00 36.02 O
ATOM 4 OP2 U B2372 67.805 101.221 104.136 1.00 35.03 O
ATOM 5 O5' U B2372 65.548 100.236 104.508 1.00 36.74 O
ATOM 6 C5' U B2372 64.608 99.190 104.824 1.00 35.55 C
ATOM 7 C4' U B2372 63.209 99.749 104.883 1.00 35.38 C
ATOM 8 O4' U B2372 63.155 100.786 105.890 1.00 36.26 O
ATOM 9 C3' U B2372 62.755 100.475 103.629 1.00 35.99 C
ATOM 10 O3' U B2372 62.282 99.539 102.671 1.00 36.54 O
ATOM 11 C2' U B2372 61.629 101.363 104.147 1.00 35.91 C
ATOM 12 O2' U B2372 60.399 100.676 104.260 1.00 36.63 O
ATOM 13 C1' U B2372 62.129 101.707 105.554 1.00 36.36 C
ATOM 14 N1 U B2372 62.606 103.085 105.772 1.00 34.72 N
ATOM 15 C2 U B2372 61.656 104.052 106.054 1.00 34.88 C
ATOM 16 O2 U B2372 60.459 103.820 106.088 1.00 35.79 O
ATOM 17 N3 U B2372 62.156 105.306 106.289 1.00 34.74 N
ATOM 18 C4 U B2372 63.473 105.694 106.267 1.00 34.23 C
ATOM 19 O4 U B2372 63.766 106.860 106.546 1.00 32.50 O
ATOM 20 C5 U B2372 64.394 104.647 105.947 1.00 34.75 C
ATOM 21 C6 U B2372 63.940 103.410 105.715 1.00 34.66 C
ATOM 22 P A B2373 62.612 99.751 101.115 1.00 37.75 P
ATOM 23 OP1 A B2373 62.245 98.488 100.424 1.00 37.73 O
ATOM 24 OP2 A B2373 63.986 100.304 100.966 1.00 35.64 O
ATOM 25 O5' A B2373 61.587 100.872 100.651 1.00 36.66 O
TER
Atoms:
OP1: (62.245,98.488,100.424)
OP2: (63.986,100.304,100.966)
C3': (59.571,102.809,99.594)
C1': (61.131,104.067,100.849)
C5': (60.227,100.859,101.101)
O4': (60.511,103.160,101.741)
C8: (63.553,103.318,101.124)
O2': (60.962,104.490,98.447)
C6: (65.193,105.949,102.792)
C5: (64.401,104.986,102.129)
C4: (63.071,105.301,101.918)
P: (62.612,99.751,101.115)
C4': (59.650,102.246,101.004)
C2': (60.928,103.492,99.444)
C2: (63.297,107.268,102.886)
N1: (64.599,107.104,103.161)
N3: (62.449,106.437,102.276)
N6: (66.487,105.779,103.078)
N7: (64.692,103.729,101.621)
N9: (62.527,104.217,101.271)
O5': (61.587,100.872,100.651)
O3': (58.467,103.722,99.546)
OP2: (63.986,100.304,100.966)
C3': (59.571,102.809,99.594)
C1': (61.131,104.067,100.849)
C5': (60.227,100.859,101.101)
O4': (60.511,103.160,101.741)
C8: (63.553,103.318,101.124)
O2': (60.962,104.490,98.447)
C6: (65.193,105.949,102.792)
C5: (64.401,104.986,102.129)
C4: (63.071,105.301,101.918)
P: (62.612,99.751,101.115)
C4': (59.650,102.246,101.004)
C2': (60.928,103.492,99.444)
C2: (63.297,107.268,102.886)
N1: (64.599,107.104,103.161)
N3: (62.449,106.437,102.276)
N6: (66.487,105.779,103.078)
N7: (64.692,103.729,101.621)
N9: (62.527,104.217,101.271)
O5': (61.587,100.872,100.651)
O3': (58.467,103.722,99.546)
C4: (63.473,105.694,106.267)
N3: (62.156,105.306,106.289)
OP1: (67.368,98.742,103.666)
OP2: (67.805,101.221,104.136)
C2: (61.656,104.052,106.054)
C1': (62.129,101.707,105.554)
C3': (62.755,100.475,103.629)
O5': (65.548,100.236,104.508)
O4': (63.155,100.786,105.890)
C5': (64.608,99.190,104.824)
P: (67.116,99.957,104.479)
C4': (63.209,99.749,104.883)
C2': (61.629,101.363,104.147)
O2': (60.399,100.676,104.260)
N1: (62.606,103.085,105.772)
O4: (63.766,106.860,106.546)
O2: (60.459,103.820,106.088)
C6: (63.940,103.410,105.715)
C5: (64.394,104.647,105.947)
O3': (62.282,99.539,102.671)
N3: (62.156,105.306,106.289)
OP1: (67.368,98.742,103.666)
OP2: (67.805,101.221,104.136)
C2: (61.656,104.052,106.054)
C1': (62.129,101.707,105.554)
C3': (62.755,100.475,103.629)
O5': (65.548,100.236,104.508)
O4': (63.155,100.786,105.890)
C5': (64.608,99.190,104.824)
P: (67.116,99.957,104.479)
C4': (63.209,99.749,104.883)
C2': (61.629,101.363,104.147)
O2': (60.399,100.676,104.260)
N1: (62.606,103.085,105.772)
O4: (63.766,106.860,106.546)
O2: (60.459,103.820,106.088)
C6: (63.940,103.410,105.715)
C5: (64.394,104.647,105.947)
O3': (62.282,99.539,102.671)
Image (generated by PyMOL):