Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02629:02617
Extra
PDB:
ATOM 1 O3' U A2628 48.694 105.244 162.444 1.00 54.00 O
ATOM 2 P C A2629 48.870 106.631 163.226 1.00 54.65 P
ATOM 3 OP1 C A2629 50.301 106.986 163.224 1.00 56.38 O
ATOM 4 OP2 C A2629 48.142 106.519 164.515 1.00 58.24 O
ATOM 5 O5' C A2629 48.124 107.700 162.317 1.00 53.71 O
ATOM 6 C5' C A2629 46.701 107.862 162.375 1.00 52.83 C
ATOM 7 C4' C A2629 46.230 108.612 161.160 1.00 52.97 C
ATOM 8 O4' C A2629 46.986 109.844 161.069 1.00 53.55 O
ATOM 9 C3' C A2629 46.476 107.901 159.839 1.00 52.78 C
ATOM 10 O3' C A2629 45.365 107.025 159.584 1.00 52.87 O
ATOM 11 C2' C A2629 46.584 109.069 158.857 1.00 53.32 C
ATOM 12 O2' C A2629 45.342 109.614 158.483 1.00 55.02 O
ATOM 13 C1' C A2629 47.263 110.138 159.715 1.00 53.86 C
ATOM 14 N1 C A2629 48.724 110.330 159.546 1.00 55.33 N
ATOM 15 C2 C A2629 49.214 110.781 158.309 1.00 56.50 C
ATOM 16 O2 C A2629 48.420 110.944 157.363 1.00 58.16 O
ATOM 17 N3 C A2629 50.537 111.031 158.176 1.00 56.09 N
ATOM 18 C4 C A2629 51.360 110.853 159.209 1.00 55.96 C
ATOM 19 N4 C A2629 52.652 111.170 159.044 1.00 53.80 N
ATOM 20 C5 C A2629 50.897 110.358 160.463 1.00 56.21 C
ATOM 21 C6 C A2629 49.587 110.108 160.585 1.00 55.94 C
ATOM 22 P U A2630 45.554 105.672 158.722 1.00 51.63 P
ATOM 23 OP1 U A2630 44.664 104.643 159.319 1.00 51.74 O
ATOM 24 OP2 U A2630 46.991 105.368 158.544 1.00 51.06 O
ATOM 25 O5' U A2630 44.932 106.069 157.311 1.00 51.59 O
TER
ATOM 1 O3' G B2616 56.029 113.200 155.798 1.00 57.31 O
ATOM 2 P A B2617 55.461 112.394 157.059 1.00 55.67 P
ATOM 3 OP1 A B2617 56.641 111.672 157.604 1.00 54.39 O
ATOM 4 OP2 A B2617 54.250 111.634 156.655 1.00 54.64 O
ATOM 5 O5' A B2617 55.011 113.542 158.067 1.00 53.96 O
ATOM 6 C5' A B2617 55.983 114.407 158.675 1.00 52.99 C
ATOM 7 C4' A B2617 55.329 115.283 159.717 1.00 53.21 C
ATOM 8 O4' A B2617 54.481 116.272 159.075 1.00 53.25 O
ATOM 9 C3' A B2617 54.388 114.596 160.690 1.00 53.44 C
ATOM 10 O3' A B2617 55.063 113.887 161.725 1.00 52.84 O
ATOM 11 C2' A B2617 53.570 115.772 161.196 1.00 53.26 C
ATOM 12 O2' A B2617 54.308 116.595 162.076 1.00 54.88 O
ATOM 13 C1' A B2617 53.359 116.546 159.900 1.00 53.34 C
ATOM 14 N9 A B2617 52.156 116.106 159.197 1.00 54.88 N
ATOM 15 C8 A B2617 52.041 115.121 158.245 1.00 55.77 C
ATOM 16 N7 A B2617 50.821 114.959 157.796 1.00 55.48 N
ATOM 17 C5 A B2617 50.081 115.897 158.501 1.00 56.27 C
ATOM 18 C6 A B2617 48.719 116.222 158.490 1.00 56.40 C
ATOM 19 N6 A B2617 47.826 115.628 157.701 1.00 60.30 N
ATOM 20 N1 A B2617 48.298 117.190 159.323 1.00 55.68 N
ATOM 21 C2 A B2617 49.196 117.792 160.106 1.00 57.36 C
ATOM 22 N3 A B2617 50.505 117.583 160.205 1.00 56.49 N
ATOM 23 C4 A B2617 50.889 116.609 159.367 1.00 55.84 C
ATOM 24 P G B2618 54.293 112.708 162.504 1.00 51.46 P
ATOM 25 OP1 G B2618 55.219 112.243 163.570 1.00 52.96 O
ATOM 26 OP2 G B2618 53.750 111.723 161.523 1.00 49.18 O
ATOM 27 O5' G B2618 53.087 113.493 163.177 1.00 50.76 O
TER
ATOM 2 P C A2629 48.870 106.631 163.226 1.00 54.65 P
ATOM 3 OP1 C A2629 50.301 106.986 163.224 1.00 56.38 O
ATOM 4 OP2 C A2629 48.142 106.519 164.515 1.00 58.24 O
ATOM 5 O5' C A2629 48.124 107.700 162.317 1.00 53.71 O
ATOM 6 C5' C A2629 46.701 107.862 162.375 1.00 52.83 C
ATOM 7 C4' C A2629 46.230 108.612 161.160 1.00 52.97 C
ATOM 8 O4' C A2629 46.986 109.844 161.069 1.00 53.55 O
ATOM 9 C3' C A2629 46.476 107.901 159.839 1.00 52.78 C
ATOM 10 O3' C A2629 45.365 107.025 159.584 1.00 52.87 O
ATOM 11 C2' C A2629 46.584 109.069 158.857 1.00 53.32 C
ATOM 12 O2' C A2629 45.342 109.614 158.483 1.00 55.02 O
ATOM 13 C1' C A2629 47.263 110.138 159.715 1.00 53.86 C
ATOM 14 N1 C A2629 48.724 110.330 159.546 1.00 55.33 N
ATOM 15 C2 C A2629 49.214 110.781 158.309 1.00 56.50 C
ATOM 16 O2 C A2629 48.420 110.944 157.363 1.00 58.16 O
ATOM 17 N3 C A2629 50.537 111.031 158.176 1.00 56.09 N
ATOM 18 C4 C A2629 51.360 110.853 159.209 1.00 55.96 C
ATOM 19 N4 C A2629 52.652 111.170 159.044 1.00 53.80 N
ATOM 20 C5 C A2629 50.897 110.358 160.463 1.00 56.21 C
ATOM 21 C6 C A2629 49.587 110.108 160.585 1.00 55.94 C
ATOM 22 P U A2630 45.554 105.672 158.722 1.00 51.63 P
ATOM 23 OP1 U A2630 44.664 104.643 159.319 1.00 51.74 O
ATOM 24 OP2 U A2630 46.991 105.368 158.544 1.00 51.06 O
ATOM 25 O5' U A2630 44.932 106.069 157.311 1.00 51.59 O
TER
ATOM 1 O3' G B2616 56.029 113.200 155.798 1.00 57.31 O
ATOM 2 P A B2617 55.461 112.394 157.059 1.00 55.67 P
ATOM 3 OP1 A B2617 56.641 111.672 157.604 1.00 54.39 O
ATOM 4 OP2 A B2617 54.250 111.634 156.655 1.00 54.64 O
ATOM 5 O5' A B2617 55.011 113.542 158.067 1.00 53.96 O
ATOM 6 C5' A B2617 55.983 114.407 158.675 1.00 52.99 C
ATOM 7 C4' A B2617 55.329 115.283 159.717 1.00 53.21 C
ATOM 8 O4' A B2617 54.481 116.272 159.075 1.00 53.25 O
ATOM 9 C3' A B2617 54.388 114.596 160.690 1.00 53.44 C
ATOM 10 O3' A B2617 55.063 113.887 161.725 1.00 52.84 O
ATOM 11 C2' A B2617 53.570 115.772 161.196 1.00 53.26 C
ATOM 12 O2' A B2617 54.308 116.595 162.076 1.00 54.88 O
ATOM 13 C1' A B2617 53.359 116.546 159.900 1.00 53.34 C
ATOM 14 N9 A B2617 52.156 116.106 159.197 1.00 54.88 N
ATOM 15 C8 A B2617 52.041 115.121 158.245 1.00 55.77 C
ATOM 16 N7 A B2617 50.821 114.959 157.796 1.00 55.48 N
ATOM 17 C5 A B2617 50.081 115.897 158.501 1.00 56.27 C
ATOM 18 C6 A B2617 48.719 116.222 158.490 1.00 56.40 C
ATOM 19 N6 A B2617 47.826 115.628 157.701 1.00 60.30 N
ATOM 20 N1 A B2617 48.298 117.190 159.323 1.00 55.68 N
ATOM 21 C2 A B2617 49.196 117.792 160.106 1.00 57.36 C
ATOM 22 N3 A B2617 50.505 117.583 160.205 1.00 56.49 N
ATOM 23 C4 A B2617 50.889 116.609 159.367 1.00 55.84 C
ATOM 24 P G B2618 54.293 112.708 162.504 1.00 51.46 P
ATOM 25 OP1 G B2618 55.219 112.243 163.570 1.00 52.96 O
ATOM 26 OP2 G B2618 53.750 111.723 161.523 1.00 49.18 O
ATOM 27 O5' G B2618 53.087 113.493 163.177 1.00 50.76 O
TER
Atoms:
C2: (49.214,110.781,158.309)
OP1: (50.301,106.986,163.224)
OP2: (48.142,106.519,164.515)
C4: (51.360,110.853,159.209)
O5': (48.124,107.700,162.317)
C3': (46.476,107.901,159.839)
C1': (47.263,110.138,159.715)
O4': (46.986,109.844,161.069)
C5': (46.701,107.862,162.375)
P: (48.870,106.631,163.226)
O2: (48.420,110.944,157.363)
C4': (46.230,108.612,161.160)
C2': (46.584,109.069,158.857)
O2': (45.342,109.614,158.483)
N1: (48.724,110.330,159.546)
N3: (50.537,111.031,158.176)
N4: (52.652,111.170,159.044)
C6: (49.587,110.108,160.585)
C5: (50.897,110.358,160.463)
O3': (45.365,107.025,159.584)
OP1: (50.301,106.986,163.224)
OP2: (48.142,106.519,164.515)
C4: (51.360,110.853,159.209)
O5': (48.124,107.700,162.317)
C3': (46.476,107.901,159.839)
C1': (47.263,110.138,159.715)
O4': (46.986,109.844,161.069)
C5': (46.701,107.862,162.375)
P: (48.870,106.631,163.226)
O2: (48.420,110.944,157.363)
C4': (46.230,108.612,161.160)
C2': (46.584,109.069,158.857)
O2': (45.342,109.614,158.483)
N1: (48.724,110.330,159.546)
N3: (50.537,111.031,158.176)
N4: (52.652,111.170,159.044)
C6: (49.587,110.108,160.585)
C5: (50.897,110.358,160.463)
O3': (45.365,107.025,159.584)
OP1: (56.641,111.672,157.604)
OP2: (54.250,111.634,156.655)
C3': (54.388,114.596,160.690)
C1': (53.359,116.546,159.900)
C5': (55.983,114.407,158.675)
O4': (54.481,116.272,159.075)
C8: (52.041,115.121,158.245)
O2': (54.308,116.595,162.076)
C6: (48.719,116.222,158.490)
C5: (50.081,115.897,158.501)
C4: (50.889,116.609,159.367)
P: (55.461,112.394,157.059)
C4': (55.329,115.283,159.717)
C2': (53.570,115.772,161.196)
C2: (49.196,117.792,160.106)
N1: (48.298,117.190,159.323)
N3: (50.505,117.583,160.205)
N6: (47.826,115.628,157.701)
N7: (50.821,114.959,157.796)
N9: (52.156,116.106,159.197)
O5': (55.011,113.542,158.067)
O3': (55.063,113.887,161.725)
OP2: (54.250,111.634,156.655)
C3': (54.388,114.596,160.690)
C1': (53.359,116.546,159.900)
C5': (55.983,114.407,158.675)
O4': (54.481,116.272,159.075)
C8: (52.041,115.121,158.245)
O2': (54.308,116.595,162.076)
C6: (48.719,116.222,158.490)
C5: (50.081,115.897,158.501)
C4: (50.889,116.609,159.367)
P: (55.461,112.394,157.059)
C4': (55.329,115.283,159.717)
C2': (53.570,115.772,161.196)
C2: (49.196,117.792,160.106)
N1: (48.298,117.190,159.323)
N3: (50.505,117.583,160.205)
N6: (47.826,115.628,157.701)
N7: (50.821,114.959,157.796)
N9: (52.156,116.106,159.197)
O5': (55.011,113.542,158.067)
O3': (55.063,113.887,161.725)
Image (generated by PyMOL):