ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1OOA:C26:C25

Extra

PDB:
ATOM 1 O3' U A 25 6.104 -24.974 39.385 1.00 79.21 O
ATOM 2 P A A 26 4.615 -24.366 39.288 1.00 83.78 P
ATOM 3 OP1 A A 26 3.800 -25.037 40.334 1.00 79.59 O
ATOM 4 OP2 A A 26 4.175 -24.420 37.867 1.00 77.19 O
ATOM 5 O5' A A 26 4.802 -22.841 39.713 1.00 83.74 O
ATOM 6 C5' A A 26 5.249 -22.508 41.024 1.00 93.17 C
ATOM 7 C4' A A 26 5.804 -21.105 41.054 1.00 98.95 C
ATOM 8 O4' A A 26 6.826 -20.987 40.032 1.00 98.79 O
ATOM 9 C3' A A 26 4.831 -19.983 40.727 1.00102.99 C
ATOM 10 O3' A A 26 4.093 -19.594 41.879 1.00109.44 O
ATOM 11 C2' A A 26 5.771 -18.870 40.280 1.00103.19 C
ATOM 12 O2' A A 26 6.360 -18.158 41.351 1.00105.91 O
ATOM 13 C1' A A 26 6.838 -19.663 39.525 1.00 98.44 C
ATOM 14 N9 A A 26 6.563 -19.712 38.092 1.00 92.03 N
ATOM 15 C8 A A 26 6.040 -20.740 37.346 1.00 88.88 C
ATOM 16 N7 A A 26 5.896 -20.450 36.075 1.00 86.84 N
ATOM 17 C5 A A 26 6.362 -19.144 35.978 1.00 89.51 C
ATOM 18 C6 A A 26 6.476 -18.253 34.893 1.00 90.03 C
ATOM 19 N6 A A 26 6.112 -18.555 33.643 1.00 90.00 N
ATOM 20 N1 A A 26 6.982 -17.022 35.141 1.00 87.26 N
ATOM 21 C2 A A 26 7.343 -16.717 36.395 1.00 86.64 C
ATOM 22 N3 A A 26 7.283 -17.465 37.494 1.00 86.62 N
ATOM 23 C4 A A 26 6.779 -18.680 37.213 1.00 88.77 C
ATOM 24 P U A 27 2.628 -18.952 41.709 1.00115.96 P
ATOM 25 OP1 U A 27 2.076 -18.752 43.076 1.00117.40 O
ATOM 26 OP2 U A 27 1.881 -19.786 40.727 1.00108.60 O
ATOM 27 O5' U A 27 2.889 -17.520 41.051 1.00119.03 O
TER

ATOM 1 O3' G B 24 7.999 -27.450 34.083 1.00 78.57 O
ATOM 2 P U B 25 6.693 -26.641 34.565 1.00 80.11 P
ATOM 3 OP1 U B 25 5.646 -27.627 34.939 1.00 80.48 O
ATOM 4 OP2 U B 25 6.393 -25.600 33.546 1.00 78.31 O
ATOM 5 O5' U B 25 7.177 -25.897 35.886 1.00 81.55 O
ATOM 6 C5' U B 25 7.563 -26.640 37.035 1.00 78.15 C
ATOM 7 C4' U B 25 8.045 -25.707 38.115 1.00 80.06 C
ATOM 8 O4' U B 25 9.262 -25.052 37.670 1.00 77.74 O
ATOM 9 C3' U B 25 7.104 -24.560 38.456 1.00 80.20 C
ATOM 10 O3' U B 25 6.104 -24.974 39.385 1.00 79.21 O
ATOM 11 C2' U B 25 8.061 -23.541 39.059 1.00 79.65 C
ATOM 12 O2' U B 25 8.385 -23.823 40.407 1.00 78.68 O
ATOM 13 C1' U B 25 9.298 -23.727 38.172 1.00 77.44 C
ATOM 14 N1 U B 25 9.328 -22.805 37.028 1.00 68.82 N
ATOM 15 C2 U B 25 9.845 -21.538 37.239 1.00 70.10 C
ATOM 16 O2 U B 25 10.281 -21.172 38.322 1.00 67.93 O
ATOM 17 N3 U B 25 9.833 -20.717 36.138 1.00 63.46 N
ATOM 18 C4 U B 25 9.371 -21.028 34.875 1.00 61.89 C
ATOM 19 O4 U B 25 9.424 -20.175 33.983 1.00 57.01 O
ATOM 20 C5 U B 25 8.855 -22.364 34.738 1.00 60.05 C
ATOM 21 C6 U B 25 8.852 -23.184 35.792 1.00 59.74 C
ATOM 22 P A B 26 4.615 -24.366 39.288 1.00 83.78 P
ATOM 23 OP1 A B 26 3.800 -25.037 40.334 1.00 79.59 O
ATOM 24 OP2 A B 26 4.175 -24.420 37.867 1.00 77.19 O
ATOM 25 O5' A B 26 4.802 -22.841 39.713 1.00 83.74 O
TER

Atoms:
OP1: (3.800,-25.037,40.334)
OP2: (4.175,-24.420,37.867)
C3': (4.831,-19.983,40.727)
C1': (6.838,-19.663,39.525)
C5': (5.249,-22.508,41.024)
O4': (6.826,-20.987,40.032)
C8: (6.040,-20.740,37.346)
O2': (6.360,-18.158,41.351)
C6: (6.476,-18.253,34.893)
C5: (6.362,-19.144,35.978)
C4: (6.779,-18.680,37.213)
P: (4.615,-24.366,39.288)
C4': (5.804,-21.105,41.054)
C2': (5.771,-18.870,40.280)
C2: (7.343,-16.717,36.395)
N1: (6.982,-17.022,35.141)
N3: (7.283,-17.465,37.494)
N6: (6.112,-18.555,33.643)
N7: (5.896,-20.450,36.075)
N9: (6.563,-19.712,38.092)
O5': (4.802,-22.841,39.713)
O3': (4.093,-19.594,41.879)
C4: (9.371,-21.028,34.875)
N3: (9.833,-20.717,36.138)
OP1: (5.646,-27.627,34.939)
OP2: (6.393,-25.600,33.546)
C2: (9.845,-21.538,37.239)
C1': (9.298,-23.727,38.172)
C3': (7.104,-24.560,38.456)
O5': (7.177,-25.897,35.886)
O4': (9.262,-25.052,37.670)
C5': (7.563,-26.640,37.035)
P: (6.693,-26.641,34.565)
C4': (8.045,-25.707,38.115)
C2': (8.061,-23.541,39.059)
O2': (8.385,-23.823,40.407)
N1: (9.328,-22.805,37.028)
O4: (9.424,-20.175,33.983)
O2: (10.281,-21.172,38.322)
C6: (8.852,-23.184,35.792)
C5: (8.855,-22.364,34.738)
O3': (6.104,-24.974,39.385)
Image (generated by PyMOL):
PyMOL image
show in jmol