Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1335:A1333
Extra
PDB:
ATOM 1 O3' U A1334 -102.573 95.487 71.266 1.00 41.03 O
ATOM 2 P C A1335 -103.767 94.438 70.995 1.00 60.89 P
ATOM 3 OP1 C A1335 -103.430 93.193 71.732 1.00103.91 O
ATOM 4 OP2 C A1335 -104.036 94.378 69.531 1.00105.49 O
ATOM 5 O5' C A1335 -105.019 95.097 71.713 1.00 38.96 O
ATOM 6 C5' C A1335 -104.974 95.412 73.110 1.00 36.69 C
ATOM 7 C4' C A1335 -105.857 96.605 73.415 1.00 34.74 C
ATOM 8 O4' C A1335 -105.332 97.788 72.759 1.00 33.07 O
ATOM 9 C3' C A1335 -107.306 96.513 72.953 1.00 34.21 C
ATOM 10 O3' C A1335 -108.112 95.765 73.870 1.00 35.41 O
ATOM 11 C2' C A1335 -107.714 97.983 72.831 1.00 32.24 C
ATOM 12 O2' C A1335 -108.089 98.572 74.064 1.00 32.42 O
ATOM 13 C1' C A1335 -106.407 98.636 72.379 1.00 30.59 C
ATOM 14 N1 C A1335 -106.315 98.918 70.929 1.00 66.37 N
ATOM 15 C2 C A1335 -106.892 100.105 70.425 1.00 66.00 C
ATOM 16 O2 C A1335 -107.502 100.865 71.200 1.00 68.41 O
ATOM 17 N3 C A1335 -106.768 100.388 69.106 1.00 63.42 N
ATOM 18 C4 C A1335 -106.111 99.547 68.299 1.00 63.06 C
ATOM 19 N4 C A1335 -105.992 99.881 67.010 1.00 62.38 N
ATOM 20 C5 C A1335 -105.542 98.330 68.779 1.00 62.58 C
ATOM 21 C6 C A1335 -105.667 98.058 70.085 1.00 64.74 C
ATOM 22 P A A1336 -109.498 95.119 73.365 1.00 79.77 P
ATOM 23 OP1 A A1336 -109.936 94.088 74.343 1.00 69.03 O
ATOM 24 OP2 A A1336 -109.340 94.754 71.925 1.00 68.69 O
ATOM 25 O5' A A1336 -110.526 96.332 73.446 1.00 51.29 O
TER
ATOM 1 O3' G B1332 -104.614 103.174 63.331 1.00 51.66 O
ATOM 2 P A B1333 -105.204 102.141 64.411 1.00 42.60 P
ATOM 3 OP1 A B1333 -106.051 101.164 63.678 1.00116.05 O
ATOM 4 OP2 A B1333 -105.791 102.916 65.542 1.00114.13 O
ATOM 5 O5' A B1333 -103.909 101.373 64.933 1.00 42.53 O
ATOM 6 C5' A B1333 -103.017 100.696 64.020 1.00 42.45 C
ATOM 7 C4' A B1333 -101.721 100.348 64.720 1.00 42.07 C
ATOM 8 O4' A B1333 -101.035 101.572 65.067 1.00 41.74 O
ATOM 9 C3' A B1333 -101.894 99.586 66.026 1.00 41.65 C
ATOM 10 O3' A B1333 -101.846 98.191 65.761 1.00 39.85 O
ATOM 11 C2' A B1333 -100.692 100.020 66.858 1.00 42.85 C
ATOM 12 O2' A B1333 -99.549 99.228 66.622 1.00 43.04 O
ATOM 13 C1' A B1333 -100.430 101.437 66.339 1.00 43.71 C
ATOM 14 N9 A B1333 -100.907 102.528 67.190 1.00 77.46 N
ATOM 15 C8 A B1333 -102.037 103.290 67.018 1.00 78.68 C
ATOM 16 N7 A B1333 -102.180 104.234 67.913 1.00 79.29 N
ATOM 17 C5 A B1333 -101.077 104.078 68.737 1.00 79.06 C
ATOM 18 C6 A B1333 -100.651 104.775 69.868 1.00 78.69 C
ATOM 19 N6 A B1333 -101.306 105.821 70.377 1.00 78.22 N
ATOM 20 N1 A B1333 -99.515 104.363 70.466 1.00 78.69 N
ATOM 21 C2 A B1333 -98.858 103.319 69.945 1.00 78.38 C
ATOM 22 N3 A B1333 -99.156 102.586 68.880 1.00 78.33 N
ATOM 23 C4 A B1333 -100.292 103.022 68.314 1.00 78.56 C
ATOM 24 P U B1334 -103.047 97.244 66.238 1.00 43.01 P
ATOM 25 OP1 U B1334 -102.839 95.922 65.594 1.00 57.69 O
ATOM 26 OP2 U B1334 -104.323 97.975 66.030 1.00 57.79 O
ATOM 27 O5' U B1334 -102.816 97.063 67.798 1.00 41.94 O
TER
ATOM 2 P C A1335 -103.767 94.438 70.995 1.00 60.89 P
ATOM 3 OP1 C A1335 -103.430 93.193 71.732 1.00103.91 O
ATOM 4 OP2 C A1335 -104.036 94.378 69.531 1.00105.49 O
ATOM 5 O5' C A1335 -105.019 95.097 71.713 1.00 38.96 O
ATOM 6 C5' C A1335 -104.974 95.412 73.110 1.00 36.69 C
ATOM 7 C4' C A1335 -105.857 96.605 73.415 1.00 34.74 C
ATOM 8 O4' C A1335 -105.332 97.788 72.759 1.00 33.07 O
ATOM 9 C3' C A1335 -107.306 96.513 72.953 1.00 34.21 C
ATOM 10 O3' C A1335 -108.112 95.765 73.870 1.00 35.41 O
ATOM 11 C2' C A1335 -107.714 97.983 72.831 1.00 32.24 C
ATOM 12 O2' C A1335 -108.089 98.572 74.064 1.00 32.42 O
ATOM 13 C1' C A1335 -106.407 98.636 72.379 1.00 30.59 C
ATOM 14 N1 C A1335 -106.315 98.918 70.929 1.00 66.37 N
ATOM 15 C2 C A1335 -106.892 100.105 70.425 1.00 66.00 C
ATOM 16 O2 C A1335 -107.502 100.865 71.200 1.00 68.41 O
ATOM 17 N3 C A1335 -106.768 100.388 69.106 1.00 63.42 N
ATOM 18 C4 C A1335 -106.111 99.547 68.299 1.00 63.06 C
ATOM 19 N4 C A1335 -105.992 99.881 67.010 1.00 62.38 N
ATOM 20 C5 C A1335 -105.542 98.330 68.779 1.00 62.58 C
ATOM 21 C6 C A1335 -105.667 98.058 70.085 1.00 64.74 C
ATOM 22 P A A1336 -109.498 95.119 73.365 1.00 79.77 P
ATOM 23 OP1 A A1336 -109.936 94.088 74.343 1.00 69.03 O
ATOM 24 OP2 A A1336 -109.340 94.754 71.925 1.00 68.69 O
ATOM 25 O5' A A1336 -110.526 96.332 73.446 1.00 51.29 O
TER
ATOM 1 O3' G B1332 -104.614 103.174 63.331 1.00 51.66 O
ATOM 2 P A B1333 -105.204 102.141 64.411 1.00 42.60 P
ATOM 3 OP1 A B1333 -106.051 101.164 63.678 1.00116.05 O
ATOM 4 OP2 A B1333 -105.791 102.916 65.542 1.00114.13 O
ATOM 5 O5' A B1333 -103.909 101.373 64.933 1.00 42.53 O
ATOM 6 C5' A B1333 -103.017 100.696 64.020 1.00 42.45 C
ATOM 7 C4' A B1333 -101.721 100.348 64.720 1.00 42.07 C
ATOM 8 O4' A B1333 -101.035 101.572 65.067 1.00 41.74 O
ATOM 9 C3' A B1333 -101.894 99.586 66.026 1.00 41.65 C
ATOM 10 O3' A B1333 -101.846 98.191 65.761 1.00 39.85 O
ATOM 11 C2' A B1333 -100.692 100.020 66.858 1.00 42.85 C
ATOM 12 O2' A B1333 -99.549 99.228 66.622 1.00 43.04 O
ATOM 13 C1' A B1333 -100.430 101.437 66.339 1.00 43.71 C
ATOM 14 N9 A B1333 -100.907 102.528 67.190 1.00 77.46 N
ATOM 15 C8 A B1333 -102.037 103.290 67.018 1.00 78.68 C
ATOM 16 N7 A B1333 -102.180 104.234 67.913 1.00 79.29 N
ATOM 17 C5 A B1333 -101.077 104.078 68.737 1.00 79.06 C
ATOM 18 C6 A B1333 -100.651 104.775 69.868 1.00 78.69 C
ATOM 19 N6 A B1333 -101.306 105.821 70.377 1.00 78.22 N
ATOM 20 N1 A B1333 -99.515 104.363 70.466 1.00 78.69 N
ATOM 21 C2 A B1333 -98.858 103.319 69.945 1.00 78.38 C
ATOM 22 N3 A B1333 -99.156 102.586 68.880 1.00 78.33 N
ATOM 23 C4 A B1333 -100.292 103.022 68.314 1.00 78.56 C
ATOM 24 P U B1334 -103.047 97.244 66.238 1.00 43.01 P
ATOM 25 OP1 U B1334 -102.839 95.922 65.594 1.00 57.69 O
ATOM 26 OP2 U B1334 -104.323 97.975 66.030 1.00 57.79 O
ATOM 27 O5' U B1334 -102.816 97.063 67.798 1.00 41.94 O
TER
Atoms:
C2: (-106.892,100.105,70.425)
OP1: (-103.430,93.193,71.732)
OP2: (-104.036,94.378,69.531)
C4: (-106.111,99.547,68.299)
O5': (-105.019,95.097,71.713)
C3': (-107.306,96.513,72.953)
C1': (-106.407,98.636,72.379)
O4': (-105.332,97.788,72.759)
C5': (-104.974,95.412,73.110)
P: (-103.767,94.438,70.995)
O2: (-107.502,100.865,71.200)
C4': (-105.857,96.605,73.415)
C2': (-107.714,97.983,72.831)
O2': (-108.089,98.572,74.064)
N1: (-106.315,98.918,70.929)
N3: (-106.768,100.388,69.106)
N4: (-105.992,99.881,67.010)
C6: (-105.667,98.058,70.085)
C5: (-105.542,98.330,68.779)
O3': (-108.112,95.765,73.870)
OP1: (-103.430,93.193,71.732)
OP2: (-104.036,94.378,69.531)
C4: (-106.111,99.547,68.299)
O5': (-105.019,95.097,71.713)
C3': (-107.306,96.513,72.953)
C1': (-106.407,98.636,72.379)
O4': (-105.332,97.788,72.759)
C5': (-104.974,95.412,73.110)
P: (-103.767,94.438,70.995)
O2: (-107.502,100.865,71.200)
C4': (-105.857,96.605,73.415)
C2': (-107.714,97.983,72.831)
O2': (-108.089,98.572,74.064)
N1: (-106.315,98.918,70.929)
N3: (-106.768,100.388,69.106)
N4: (-105.992,99.881,67.010)
C6: (-105.667,98.058,70.085)
C5: (-105.542,98.330,68.779)
O3': (-108.112,95.765,73.870)
OP1: (-106.051,101.164,63.678)
OP2: (-105.791,102.916,65.542)
C3': (-101.894,99.586,66.026)
C1': (-100.430,101.437,66.339)
C5': (-103.017,100.696,64.020)
O4': (-101.035,101.572,65.067)
C8: (-102.037,103.290,67.018)
O2': (-99.549,99.228,66.622)
C6: (-100.651,104.775,69.868)
C5: (-101.077,104.078,68.737)
C4: (-100.292,103.022,68.314)
P: (-105.204,102.141,64.411)
C4': (-101.721,100.348,64.720)
C2': (-100.692,100.020,66.858)
C2: (-98.858,103.319,69.945)
N1: (-99.515,104.363,70.466)
N3: (-99.156,102.586,68.880)
N6: (-101.306,105.821,70.377)
N7: (-102.180,104.234,67.913)
N9: (-100.907,102.528,67.190)
O5': (-103.909,101.373,64.933)
O3': (-101.846,98.191,65.761)
OP2: (-105.791,102.916,65.542)
C3': (-101.894,99.586,66.026)
C1': (-100.430,101.437,66.339)
C5': (-103.017,100.696,64.020)
O4': (-101.035,101.572,65.067)
C8: (-102.037,103.290,67.018)
O2': (-99.549,99.228,66.622)
C6: (-100.651,104.775,69.868)
C5: (-101.077,104.078,68.737)
C4: (-100.292,103.022,68.314)
P: (-105.204,102.141,64.411)
C4': (-101.721,100.348,64.720)
C2': (-100.692,100.020,66.858)
C2: (-98.858,103.319,69.945)
N1: (-99.515,104.363,70.466)
N3: (-99.156,102.586,68.880)
N6: (-101.306,105.821,70.377)
N7: (-102.180,104.234,67.913)
N9: (-100.907,102.528,67.190)
O5': (-103.909,101.373,64.933)
O3': (-101.846,98.191,65.761)
Image (generated by PyMOL):