Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A828:A827
Extra
PDB:
ATOM 1 O3' U A 827 -93.304 -59.869 27.430 1.00 0.01 O
ATOM 2 P A A 828 -92.101 -59.725 26.407 1.00 0.01 P
ATOM 3 OP1 A A 828 -90.878 -60.124 27.116 1.00 0.01 O
ATOM 4 OP2 A A 828 -92.196 -58.366 25.829 1.00 0.01 O
ATOM 5 O5' A A 828 -92.427 -60.792 25.279 1.00 0.01 O
ATOM 6 C5' A A 828 -93.667 -61.459 25.220 1.00 0.01 C
ATOM 7 C4' A A 828 -94.314 -61.386 23.847 1.00 0.01 C
ATOM 8 O4' A A 828 -95.528 -60.607 23.931 1.00 0.01 O
ATOM 9 C3' A A 828 -93.499 -60.766 22.709 1.00 0.01 C
ATOM 10 O3' A A 828 -93.777 -61.479 21.508 1.00 0.01 O
ATOM 11 C2' A A 828 -94.116 -59.374 22.601 1.00 0.01 C
ATOM 12 O2' A A 828 -93.979 -58.742 21.351 1.00 0.01 O
ATOM 13 C1' A A 828 -95.555 -59.682 22.887 1.00 0.01 C
ATOM 14 N9 A A 828 -96.292 -58.552 23.336 1.00 0.12 N
ATOM 15 C8 A A 828 -95.806 -57.306 23.502 1.00 0.12 C
ATOM 16 N7 A A 828 -96.715 -56.490 23.958 1.00 0.12 N
ATOM 17 C5 A A 828 -97.836 -57.283 24.083 1.00 0.12 C
ATOM 18 C6 A A 828 -99.118 -56.984 24.506 1.00 0.12 C
ATOM 19 N6 A A 828 -99.445 -55.755 24.914 1.00 0.12 N
ATOM 20 N1 A A 828 -100.016 -57.982 24.522 1.00 0.12 N
ATOM 21 C2 A A 828 -99.600 -59.186 24.122 1.00 0.12 C
ATOM 22 N3 A A 828 -98.404 -59.579 23.684 1.00 0.12 N
ATOM 23 C4 A A 828 -97.575 -58.559 23.702 1.00 0.12 C
ATOM 24 P G A 829 -92.609 -62.067 20.583 1.00 0.01 P
ATOM 25 OP1 G A 829 -91.329 -61.493 21.049 1.00 0.01 O
ATOM 26 OP2 G A 829 -93.015 -61.858 19.201 1.00 0.01 O
ATOM 27 O5' G A 829 -92.662 -63.602 20.908 1.00 0.01 O
TER
ATOM 1 O3' U B 826 -92.040 -54.958 30.354 1.00 0.01 O
ATOM 2 P U B 827 -92.120 -56.435 30.927 1.00 0.01 P
ATOM 3 OP1 U B 827 -92.451 -56.333 32.338 1.00 0.01 O
ATOM 4 OP2 U B 827 -90.893 -57.117 30.554 1.00 0.01 O
ATOM 5 O5' U B 827 -93.322 -57.042 30.139 1.00 0.01 O
ATOM 6 C5' U B 827 -93.603 -58.409 30.240 1.00 0.01 C
ATOM 7 C4' U B 827 -94.567 -58.830 29.192 1.00 0.01 C
ATOM 8 O4' U B 827 -95.703 -57.956 29.222 1.00 0.01 O
ATOM 9 C3' U B 827 -94.061 -58.738 27.788 1.00 0.01 C
ATOM 10 O3' U B 827 -93.304 -59.869 27.430 1.00 0.01 O
ATOM 11 C2' U B 827 -95.342 -58.575 26.977 1.00 0.01 C
ATOM 12 O2' U B 827 -95.916 -59.836 26.684 1.00 0.01 O
ATOM 13 C1' U B 827 -96.259 -57.845 27.956 1.00 0.01 C
ATOM 14 N1 U B 827 -96.408 -56.435 27.658 1.00 0.01 N
ATOM 15 C2 U B 827 -97.691 -55.966 27.657 1.00 0.01 C
ATOM 16 O2 U B 827 -98.657 -56.695 27.855 1.00 0.01 O
ATOM 17 N3 U B 827 -97.843 -54.625 27.392 1.00 0.01 N
ATOM 18 C4 U B 827 -96.848 -53.720 27.167 1.00 0.01 C
ATOM 19 O4 U B 827 -97.121 -52.529 26.975 1.00 0.01 O
ATOM 20 C5 U B 827 -95.546 -54.311 27.200 1.00 0.01 C
ATOM 21 C6 U B 827 -95.374 -55.608 27.450 1.00 0.01 C
ATOM 22 P A B 828 -92.101 -59.725 26.407 1.00 0.01 P
ATOM 23 OP1 A B 828 -90.878 -60.124 27.116 1.00 0.01 O
ATOM 24 OP2 A B 828 -92.196 -58.366 25.829 1.00 0.01 O
ATOM 25 O5' A B 828 -92.427 -60.792 25.279 1.00 0.01 O
TER
ATOM 2 P A A 828 -92.101 -59.725 26.407 1.00 0.01 P
ATOM 3 OP1 A A 828 -90.878 -60.124 27.116 1.00 0.01 O
ATOM 4 OP2 A A 828 -92.196 -58.366 25.829 1.00 0.01 O
ATOM 5 O5' A A 828 -92.427 -60.792 25.279 1.00 0.01 O
ATOM 6 C5' A A 828 -93.667 -61.459 25.220 1.00 0.01 C
ATOM 7 C4' A A 828 -94.314 -61.386 23.847 1.00 0.01 C
ATOM 8 O4' A A 828 -95.528 -60.607 23.931 1.00 0.01 O
ATOM 9 C3' A A 828 -93.499 -60.766 22.709 1.00 0.01 C
ATOM 10 O3' A A 828 -93.777 -61.479 21.508 1.00 0.01 O
ATOM 11 C2' A A 828 -94.116 -59.374 22.601 1.00 0.01 C
ATOM 12 O2' A A 828 -93.979 -58.742 21.351 1.00 0.01 O
ATOM 13 C1' A A 828 -95.555 -59.682 22.887 1.00 0.01 C
ATOM 14 N9 A A 828 -96.292 -58.552 23.336 1.00 0.12 N
ATOM 15 C8 A A 828 -95.806 -57.306 23.502 1.00 0.12 C
ATOM 16 N7 A A 828 -96.715 -56.490 23.958 1.00 0.12 N
ATOM 17 C5 A A 828 -97.836 -57.283 24.083 1.00 0.12 C
ATOM 18 C6 A A 828 -99.118 -56.984 24.506 1.00 0.12 C
ATOM 19 N6 A A 828 -99.445 -55.755 24.914 1.00 0.12 N
ATOM 20 N1 A A 828 -100.016 -57.982 24.522 1.00 0.12 N
ATOM 21 C2 A A 828 -99.600 -59.186 24.122 1.00 0.12 C
ATOM 22 N3 A A 828 -98.404 -59.579 23.684 1.00 0.12 N
ATOM 23 C4 A A 828 -97.575 -58.559 23.702 1.00 0.12 C
ATOM 24 P G A 829 -92.609 -62.067 20.583 1.00 0.01 P
ATOM 25 OP1 G A 829 -91.329 -61.493 21.049 1.00 0.01 O
ATOM 26 OP2 G A 829 -93.015 -61.858 19.201 1.00 0.01 O
ATOM 27 O5' G A 829 -92.662 -63.602 20.908 1.00 0.01 O
TER
ATOM 1 O3' U B 826 -92.040 -54.958 30.354 1.00 0.01 O
ATOM 2 P U B 827 -92.120 -56.435 30.927 1.00 0.01 P
ATOM 3 OP1 U B 827 -92.451 -56.333 32.338 1.00 0.01 O
ATOM 4 OP2 U B 827 -90.893 -57.117 30.554 1.00 0.01 O
ATOM 5 O5' U B 827 -93.322 -57.042 30.139 1.00 0.01 O
ATOM 6 C5' U B 827 -93.603 -58.409 30.240 1.00 0.01 C
ATOM 7 C4' U B 827 -94.567 -58.830 29.192 1.00 0.01 C
ATOM 8 O4' U B 827 -95.703 -57.956 29.222 1.00 0.01 O
ATOM 9 C3' U B 827 -94.061 -58.738 27.788 1.00 0.01 C
ATOM 10 O3' U B 827 -93.304 -59.869 27.430 1.00 0.01 O
ATOM 11 C2' U B 827 -95.342 -58.575 26.977 1.00 0.01 C
ATOM 12 O2' U B 827 -95.916 -59.836 26.684 1.00 0.01 O
ATOM 13 C1' U B 827 -96.259 -57.845 27.956 1.00 0.01 C
ATOM 14 N1 U B 827 -96.408 -56.435 27.658 1.00 0.01 N
ATOM 15 C2 U B 827 -97.691 -55.966 27.657 1.00 0.01 C
ATOM 16 O2 U B 827 -98.657 -56.695 27.855 1.00 0.01 O
ATOM 17 N3 U B 827 -97.843 -54.625 27.392 1.00 0.01 N
ATOM 18 C4 U B 827 -96.848 -53.720 27.167 1.00 0.01 C
ATOM 19 O4 U B 827 -97.121 -52.529 26.975 1.00 0.01 O
ATOM 20 C5 U B 827 -95.546 -54.311 27.200 1.00 0.01 C
ATOM 21 C6 U B 827 -95.374 -55.608 27.450 1.00 0.01 C
ATOM 22 P A B 828 -92.101 -59.725 26.407 1.00 0.01 P
ATOM 23 OP1 A B 828 -90.878 -60.124 27.116 1.00 0.01 O
ATOM 24 OP2 A B 828 -92.196 -58.366 25.829 1.00 0.01 O
ATOM 25 O5' A B 828 -92.427 -60.792 25.279 1.00 0.01 O
TER
Atoms:
OP1: (-90.878,-60.124,27.116)
OP2: (-92.196,-58.366,25.829)
C3': (-93.499,-60.766,22.709)
C1': (-95.555,-59.682,22.887)
C5': (-93.667,-61.459,25.220)
O4': (-95.528,-60.607,23.931)
C8: (-95.806,-57.306,23.502)
O2': (-93.979,-58.742,21.351)
C6: (-99.118,-56.984,24.506)
C5: (-97.836,-57.283,24.083)
C4: (-97.575,-58.559,23.702)
P: (-92.101,-59.725,26.407)
C4': (-94.314,-61.386,23.847)
C2': (-94.116,-59.374,22.601)
C2: (-99.600,-59.186,24.122)
N1: (-100.016,-57.982,24.522)
N3: (-98.404,-59.579,23.684)
N6: (-99.445,-55.755,24.914)
N7: (-96.715,-56.490,23.958)
N9: (-96.292,-58.552,23.336)
O5': (-92.427,-60.792,25.279)
O3': (-93.777,-61.479,21.508)
OP2: (-92.196,-58.366,25.829)
C3': (-93.499,-60.766,22.709)
C1': (-95.555,-59.682,22.887)
C5': (-93.667,-61.459,25.220)
O4': (-95.528,-60.607,23.931)
C8: (-95.806,-57.306,23.502)
O2': (-93.979,-58.742,21.351)
C6: (-99.118,-56.984,24.506)
C5: (-97.836,-57.283,24.083)
C4: (-97.575,-58.559,23.702)
P: (-92.101,-59.725,26.407)
C4': (-94.314,-61.386,23.847)
C2': (-94.116,-59.374,22.601)
C2: (-99.600,-59.186,24.122)
N1: (-100.016,-57.982,24.522)
N3: (-98.404,-59.579,23.684)
N6: (-99.445,-55.755,24.914)
N7: (-96.715,-56.490,23.958)
N9: (-96.292,-58.552,23.336)
O5': (-92.427,-60.792,25.279)
O3': (-93.777,-61.479,21.508)
C4: (-96.848,-53.720,27.167)
N3: (-97.843,-54.625,27.392)
OP1: (-92.451,-56.333,32.338)
OP2: (-90.893,-57.117,30.554)
C2: (-97.691,-55.966,27.657)
C1': (-96.259,-57.845,27.956)
C3': (-94.061,-58.738,27.788)
O5': (-93.322,-57.042,30.139)
O4': (-95.703,-57.956,29.222)
C5': (-93.603,-58.409,30.240)
P: (-92.120,-56.435,30.927)
C4': (-94.567,-58.830,29.192)
C2': (-95.342,-58.575,26.977)
O2': (-95.916,-59.836,26.684)
N1: (-96.408,-56.435,27.658)
O4: (-97.121,-52.529,26.975)
O2: (-98.657,-56.695,27.855)
C6: (-95.374,-55.608,27.450)
C5: (-95.546,-54.311,27.200)
O3': (-93.304,-59.869,27.430)
N3: (-97.843,-54.625,27.392)
OP1: (-92.451,-56.333,32.338)
OP2: (-90.893,-57.117,30.554)
C2: (-97.691,-55.966,27.657)
C1': (-96.259,-57.845,27.956)
C3': (-94.061,-58.738,27.788)
O5': (-93.322,-57.042,30.139)
O4': (-95.703,-57.956,29.222)
C5': (-93.603,-58.409,30.240)
P: (-92.120,-56.435,30.927)
C4': (-94.567,-58.830,29.192)
C2': (-95.342,-58.575,26.977)
O2': (-95.916,-59.836,26.684)
N1: (-96.408,-56.435,27.658)
O4: (-97.121,-52.529,26.975)
O2: (-98.657,-56.695,27.855)
C6: (-95.374,-55.608,27.450)
C5: (-95.546,-54.311,27.200)
O3': (-93.304,-59.869,27.430)
Image (generated by PyMOL):