ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZJW:B34:B32

Extra

PDB:
ATOM 1 O3' G A 33 21.352 -5.641 24.559 1.00 74.60 O
ATOM 2 P A A 34 21.535 -4.065 24.380 1.00 65.74 P
ATOM 3 OP1 A A 34 22.294 -3.559 25.557 1.00 68.69 O
ATOM 4 OP2 A A 34 20.182 -3.529 24.095 1.00 63.01 O
ATOM 5 O5' A A 34 22.402 -3.920 23.050 1.00 62.63 O
ATOM 6 C5' A A 34 23.653 -3.239 23.057 1.00 54.18 C
ATOM 7 C4' A A 34 24.072 -2.903 21.647 1.00 52.76 C
ATOM 8 O4' A A 34 24.131 -4.132 20.879 1.00 59.30 O
ATOM 9 C3' A A 34 23.112 -2.029 20.856 1.00 56.80 C
ATOM 10 O3' A A 34 23.316 -0.647 21.137 1.00 60.75 O
ATOM 11 C2' A A 34 23.491 -2.374 19.422 1.00 58.91 C
ATOM 12 O2' A A 34 24.671 -1.731 18.982 1.00 60.59 O
ATOM 13 C1' A A 34 23.746 -3.876 19.539 1.00 59.67 C
ATOM 14 N9 A A 34 22.546 -4.657 19.247 1.00 60.18 N
ATOM 15 C8 A A 34 21.770 -5.396 20.107 1.00 54.22 C
ATOM 16 N7 A A 34 20.731 -5.954 19.532 1.00 51.36 N
ATOM 17 C5 A A 34 20.835 -5.561 18.203 1.00 56.50 C
ATOM 18 C6 A A 34 20.037 -5.814 17.074 1.00 56.97 C
ATOM 19 N6 A A 34 18.922 -6.546 17.103 1.00 62.23 N
ATOM 20 N1 A A 34 20.426 -5.277 15.895 1.00 57.46 N
ATOM 21 C2 A A 34 21.538 -4.535 15.868 1.00 62.40 C
ATOM 22 N3 A A 34 22.368 -4.224 16.860 1.00 61.42 N
ATOM 23 C4 A A 34 21.954 -4.772 18.013 1.00 59.46 C
ATOM 24 P U A 35 22.062 0.359 21.155 1.00 61.40 P
ATOM 25 OP1 U A 35 22.587 1.729 21.352 1.00 73.77 O
ATOM 26 OP2 U A 35 21.069 -0.187 22.111 1.00 78.58 O
ATOM 27 O5' U A 35 21.470 0.272 19.682 1.00 53.83 O
TER

ATOM 1 O3' C B 31 19.398 -12.199 18.300 1.00 86.89 O
ATOM 2 P U B 32 20.110 -10.876 17.733 1.00 63.81 P
ATOM 3 OP1 U B 32 19.119 -9.777 17.770 1.00 62.94 O
ATOM 4 OP2 U B 32 20.790 -11.201 16.456 1.00 65.18 O
ATOM 5 O5' U B 32 21.235 -10.565 18.819 1.00 64.68 O
ATOM 6 C5' U B 32 22.332 -11.463 19.025 1.00 66.80 C
ATOM 7 C4' U B 32 23.641 -10.716 18.918 1.00 66.44 C
ATOM 8 O4' U B 32 23.744 -10.144 17.605 1.00 68.96 O
ATOM 9 C3' U B 32 23.803 -9.550 19.884 1.00 67.07 C
ATOM 10 O3' U B 32 24.597 -10.014 20.973 1.00 64.80 O
ATOM 11 C2' U B 32 24.636 -8.514 19.118 1.00 72.81 C
ATOM 12 O2' U B 32 25.986 -8.460 19.527 1.00 90.45 O
ATOM 13 C1' U B 32 24.587 -9.026 17.678 1.00 68.43 C
ATOM 14 N1 U B 32 24.256 -8.080 16.607 1.00 56.93 N
ATOM 15 C2 U B 32 25.237 -7.173 16.260 1.00 54.64 C
ATOM 16 O2 U B 32 26.295 -7.085 16.870 1.00 48.11 O
ATOM 17 N3 U B 32 24.933 -6.374 15.186 1.00 52.91 N
ATOM 18 C4 U B 32 23.761 -6.378 14.462 1.00 58.37 C
ATOM 19 O4 U B 32 23.628 -5.595 13.526 1.00 60.37 O
ATOM 20 C5 U B 32 22.779 -7.319 14.915 1.00 60.98 C
ATOM 21 C6 U B 32 23.053 -8.114 15.950 1.00 56.80 C
ATOM 22 P G B 33 23.948 -10.217 22.422 1.00 54.65 P
ATOM 23 OP1 G B 33 24.891 -9.646 23.417 1.00 48.09 O
ATOM 24 OP2 G B 33 23.549 -11.643 22.536 1.00 69.56 O
ATOM 25 O5' G B 33 22.626 -9.328 22.361 1.00 58.50 O
TER

Atoms:
OP1: (22.294,-3.559,25.557)
OP2: (20.182,-3.529,24.095)
C3': (23.112,-2.029,20.856)
C1': (23.746,-3.876,19.539)
C5': (23.653,-3.239,23.057)
O4': (24.131,-4.132,20.879)
C8: (21.770,-5.396,20.107)
O2': (24.671,-1.731,18.982)
C6: (20.037,-5.814,17.074)
C5: (20.835,-5.561,18.203)
C4: (21.954,-4.772,18.013)
P: (21.535,-4.065,24.380)
C4': (24.072,-2.903,21.647)
C2': (23.491,-2.374,19.422)
C2: (21.538,-4.535,15.868)
N1: (20.426,-5.277,15.895)
N3: (22.368,-4.224,16.860)
N6: (18.922,-6.546,17.103)
N7: (20.731,-5.954,19.532)
N9: (22.546,-4.657,19.247)
O5': (22.402,-3.920,23.050)
O3': (23.316,-0.647,21.137)
C4: (23.761,-6.378,14.462)
N3: (24.933,-6.374,15.186)
OP1: (19.119,-9.777,17.770)
OP2: (20.790,-11.201,16.456)
C2: (25.237,-7.173,16.260)
C1': (24.587,-9.026,17.678)
C3': (23.803,-9.550,19.884)
O5': (21.235,-10.565,18.819)
O4': (23.744,-10.144,17.605)
C5': (22.332,-11.463,19.025)
P: (20.110,-10.876,17.733)
C4': (23.641,-10.716,18.918)
C2': (24.636,-8.514,19.118)
O2': (25.986,-8.460,19.527)
N1: (24.256,-8.080,16.607)
O4: (23.628,-5.595,13.526)
O2: (26.295,-7.085,16.870)
C6: (23.053,-8.114,15.950)
C5: (22.779,-7.319,14.915)
O3': (24.597,-10.014,20.973)
Image (generated by PyMOL):
PyMOL image
show in jmol