Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1878:A1852
Extra
PDB:
ATOM 1 O3' C A1877 -35.968 101.803 123.008 1.00 2.22 O
ATOM 2 P C A1878 -36.065 103.249 122.327 1.00 30.44 P
ATOM 3 OP1 C A1878 -36.946 103.046 121.144 1.00 32.64 O
ATOM 4 OP2 C A1878 -34.674 103.740 122.123 1.00 32.64 O
ATOM 5 O5' C A1878 -36.842 104.161 123.402 1.00 50.23 O
ATOM 6 C5' C A1878 -37.697 105.283 122.970 1.00 50.23 C
ATOM 7 C4' C A1878 -37.882 106.308 124.081 1.00 50.23 C
ATOM 8 O4' C A1878 -36.647 106.799 124.652 1.00 50.23 O
ATOM 9 C3' C A1878 -38.747 106.037 125.295 1.00 50.23 C
ATOM 10 O3' C A1878 -39.876 105.263 124.954 1.00 50.23 O
ATOM 11 C2' C A1878 -37.736 105.403 126.255 1.00 50.23 C
ATOM 12 O2' C A1878 -37.480 104.050 125.924 1.00 50.23 O
ATOM 13 C1' C A1878 -36.495 106.241 125.939 1.00 50.23 C
ATOM 14 N1 C A1878 -35.094 105.895 126.192 1.00 6.24 N
ATOM 15 C2 C A1878 -34.529 106.138 127.445 1.00 6.24 C
ATOM 16 O2 C A1878 -35.245 106.569 128.360 1.00 6.24 O
ATOM 17 N3 C A1878 -33.207 105.898 127.626 1.00 6.24 N
ATOM 18 C4 C A1878 -32.465 105.432 126.610 1.00 6.24 C
ATOM 19 N4 C A1878 -31.158 105.241 126.812 1.00 6.24 N
ATOM 20 C5 C A1878 -33.027 105.144 125.337 1.00 6.24 C
ATOM 21 C6 C A1878 -34.331 105.376 125.178 1.00 6.24 C
ATOM 22 P U A1879 -41.355 105.854 125.225 1.00 25.28 P
ATOM 23 OP1 U A1879 -41.736 105.525 126.626 1.00139.65 O
ATOM 24 OP2 U A1879 -42.223 105.401 124.110 1.00139.65 O
ATOM 25 O5' U A1879 -41.229 107.434 125.107 1.00 60.28 O
TER
ATOM 1 O3' G B1851 -28.953 107.477 129.890 1.00 1.79 O
ATOM 2 P A B1852 -30.074 106.520 130.550 1.00 10.09 P
ATOM 3 OP1 A B1852 -29.373 105.393 131.213 1.00 33.65 O
ATOM 4 OP2 A B1852 -31.182 106.240 129.597 1.00 33.65 O
ATOM 5 O5' A B1852 -30.635 107.450 131.700 1.00 4.82 O
ATOM 6 C5' A B1852 -31.969 107.380 132.111 1.00 4.82 C
ATOM 7 C4' A B1852 -32.017 107.598 133.580 1.00 4.82 C
ATOM 8 O4' A B1852 -33.401 107.631 133.989 1.00 4.82 O
ATOM 9 C3' A B1852 -31.321 106.522 134.407 1.00 4.82 C
ATOM 10 O3' A B1852 -30.758 107.133 135.568 1.00 4.82 O
ATOM 11 C2' A B1852 -32.488 105.638 134.843 1.00 4.82 C
ATOM 12 O2' A B1852 -32.228 104.977 136.075 1.00 4.82 O
ATOM 13 C1' A B1852 -33.616 106.666 134.985 1.00 4.82 C
ATOM 14 N9 A B1852 -34.965 106.159 134.808 1.00 31.80 N
ATOM 15 C8 A B1852 -35.943 106.052 135.755 1.00 31.80 C
ATOM 16 N7 A B1852 -37.063 105.553 135.301 1.00 31.80 N
ATOM 17 C5 A B1852 -36.800 105.317 133.963 1.00 31.80 C
ATOM 18 C6 A B1852 -37.574 104.778 132.941 1.00 31.80 C
ATOM 19 N6 A B1852 -38.826 104.355 133.113 1.00 31.80 N
ATOM 20 N1 A B1852 -37.013 104.676 131.717 1.00 31.80 N
ATOM 21 C2 A B1852 -35.752 105.096 131.553 1.00 31.80 C
ATOM 22 N3 A B1852 -34.922 105.617 132.444 1.00 31.80 N
ATOM 23 C4 A B1852 -35.515 105.696 133.644 1.00 31.80 C
ATOM 24 P A B1853 -29.265 106.772 136.046 1.00 31.22 P
ATOM 25 OP1 A B1853 -28.934 105.410 135.572 1.00 32.84 O
ATOM 26 OP2 A B1853 -29.191 107.082 137.501 1.00 32.84 O
ATOM 27 O5' A B1853 -28.371 107.839 135.278 1.00 30.24 O
TER
ATOM 2 P C A1878 -36.065 103.249 122.327 1.00 30.44 P
ATOM 3 OP1 C A1878 -36.946 103.046 121.144 1.00 32.64 O
ATOM 4 OP2 C A1878 -34.674 103.740 122.123 1.00 32.64 O
ATOM 5 O5' C A1878 -36.842 104.161 123.402 1.00 50.23 O
ATOM 6 C5' C A1878 -37.697 105.283 122.970 1.00 50.23 C
ATOM 7 C4' C A1878 -37.882 106.308 124.081 1.00 50.23 C
ATOM 8 O4' C A1878 -36.647 106.799 124.652 1.00 50.23 O
ATOM 9 C3' C A1878 -38.747 106.037 125.295 1.00 50.23 C
ATOM 10 O3' C A1878 -39.876 105.263 124.954 1.00 50.23 O
ATOM 11 C2' C A1878 -37.736 105.403 126.255 1.00 50.23 C
ATOM 12 O2' C A1878 -37.480 104.050 125.924 1.00 50.23 O
ATOM 13 C1' C A1878 -36.495 106.241 125.939 1.00 50.23 C
ATOM 14 N1 C A1878 -35.094 105.895 126.192 1.00 6.24 N
ATOM 15 C2 C A1878 -34.529 106.138 127.445 1.00 6.24 C
ATOM 16 O2 C A1878 -35.245 106.569 128.360 1.00 6.24 O
ATOM 17 N3 C A1878 -33.207 105.898 127.626 1.00 6.24 N
ATOM 18 C4 C A1878 -32.465 105.432 126.610 1.00 6.24 C
ATOM 19 N4 C A1878 -31.158 105.241 126.812 1.00 6.24 N
ATOM 20 C5 C A1878 -33.027 105.144 125.337 1.00 6.24 C
ATOM 21 C6 C A1878 -34.331 105.376 125.178 1.00 6.24 C
ATOM 22 P U A1879 -41.355 105.854 125.225 1.00 25.28 P
ATOM 23 OP1 U A1879 -41.736 105.525 126.626 1.00139.65 O
ATOM 24 OP2 U A1879 -42.223 105.401 124.110 1.00139.65 O
ATOM 25 O5' U A1879 -41.229 107.434 125.107 1.00 60.28 O
TER
ATOM 1 O3' G B1851 -28.953 107.477 129.890 1.00 1.79 O
ATOM 2 P A B1852 -30.074 106.520 130.550 1.00 10.09 P
ATOM 3 OP1 A B1852 -29.373 105.393 131.213 1.00 33.65 O
ATOM 4 OP2 A B1852 -31.182 106.240 129.597 1.00 33.65 O
ATOM 5 O5' A B1852 -30.635 107.450 131.700 1.00 4.82 O
ATOM 6 C5' A B1852 -31.969 107.380 132.111 1.00 4.82 C
ATOM 7 C4' A B1852 -32.017 107.598 133.580 1.00 4.82 C
ATOM 8 O4' A B1852 -33.401 107.631 133.989 1.00 4.82 O
ATOM 9 C3' A B1852 -31.321 106.522 134.407 1.00 4.82 C
ATOM 10 O3' A B1852 -30.758 107.133 135.568 1.00 4.82 O
ATOM 11 C2' A B1852 -32.488 105.638 134.843 1.00 4.82 C
ATOM 12 O2' A B1852 -32.228 104.977 136.075 1.00 4.82 O
ATOM 13 C1' A B1852 -33.616 106.666 134.985 1.00 4.82 C
ATOM 14 N9 A B1852 -34.965 106.159 134.808 1.00 31.80 N
ATOM 15 C8 A B1852 -35.943 106.052 135.755 1.00 31.80 C
ATOM 16 N7 A B1852 -37.063 105.553 135.301 1.00 31.80 N
ATOM 17 C5 A B1852 -36.800 105.317 133.963 1.00 31.80 C
ATOM 18 C6 A B1852 -37.574 104.778 132.941 1.00 31.80 C
ATOM 19 N6 A B1852 -38.826 104.355 133.113 1.00 31.80 N
ATOM 20 N1 A B1852 -37.013 104.676 131.717 1.00 31.80 N
ATOM 21 C2 A B1852 -35.752 105.096 131.553 1.00 31.80 C
ATOM 22 N3 A B1852 -34.922 105.617 132.444 1.00 31.80 N
ATOM 23 C4 A B1852 -35.515 105.696 133.644 1.00 31.80 C
ATOM 24 P A B1853 -29.265 106.772 136.046 1.00 31.22 P
ATOM 25 OP1 A B1853 -28.934 105.410 135.572 1.00 32.84 O
ATOM 26 OP2 A B1853 -29.191 107.082 137.501 1.00 32.84 O
ATOM 27 O5' A B1853 -28.371 107.839 135.278 1.00 30.24 O
TER
Atoms:
C2: (-34.529,106.138,127.445)
OP1: (-36.946,103.046,121.144)
OP2: (-34.674,103.740,122.123)
C4: (-32.465,105.432,126.610)
O5': (-36.842,104.161,123.402)
C3': (-38.747,106.037,125.295)
C1': (-36.495,106.241,125.939)
O4': (-36.647,106.799,124.652)
C5': (-37.697,105.283,122.970)
P: (-36.065,103.249,122.327)
O2: (-35.245,106.569,128.360)
C4': (-37.882,106.308,124.081)
C2': (-37.736,105.403,126.255)
O2': (-37.480,104.050,125.924)
N1: (-35.094,105.895,126.192)
N3: (-33.207,105.898,127.626)
N4: (-31.158,105.241,126.812)
C6: (-34.331,105.376,125.178)
C5: (-33.027,105.144,125.337)
O3': (-39.876,105.263,124.954)
OP1: (-36.946,103.046,121.144)
OP2: (-34.674,103.740,122.123)
C4: (-32.465,105.432,126.610)
O5': (-36.842,104.161,123.402)
C3': (-38.747,106.037,125.295)
C1': (-36.495,106.241,125.939)
O4': (-36.647,106.799,124.652)
C5': (-37.697,105.283,122.970)
P: (-36.065,103.249,122.327)
O2: (-35.245,106.569,128.360)
C4': (-37.882,106.308,124.081)
C2': (-37.736,105.403,126.255)
O2': (-37.480,104.050,125.924)
N1: (-35.094,105.895,126.192)
N3: (-33.207,105.898,127.626)
N4: (-31.158,105.241,126.812)
C6: (-34.331,105.376,125.178)
C5: (-33.027,105.144,125.337)
O3': (-39.876,105.263,124.954)
OP1: (-29.373,105.393,131.213)
OP2: (-31.182,106.240,129.597)
C3': (-31.321,106.522,134.407)
C1': (-33.616,106.666,134.985)
C5': (-31.969,107.380,132.111)
O4': (-33.401,107.631,133.989)
C8: (-35.943,106.052,135.755)
O2': (-32.228,104.977,136.075)
C6: (-37.574,104.778,132.941)
C5: (-36.800,105.317,133.963)
C4: (-35.515,105.696,133.644)
P: (-30.074,106.520,130.550)
C4': (-32.017,107.598,133.580)
C2': (-32.488,105.638,134.843)
C2: (-35.752,105.096,131.553)
N1: (-37.013,104.676,131.717)
N3: (-34.922,105.617,132.444)
N6: (-38.826,104.355,133.113)
N7: (-37.063,105.553,135.301)
N9: (-34.965,106.159,134.808)
O5': (-30.635,107.450,131.700)
O3': (-30.758,107.133,135.568)
OP2: (-31.182,106.240,129.597)
C3': (-31.321,106.522,134.407)
C1': (-33.616,106.666,134.985)
C5': (-31.969,107.380,132.111)
O4': (-33.401,107.631,133.989)
C8: (-35.943,106.052,135.755)
O2': (-32.228,104.977,136.075)
C6: (-37.574,104.778,132.941)
C5: (-36.800,105.317,133.963)
C4: (-35.515,105.696,133.644)
P: (-30.074,106.520,130.550)
C4': (-32.017,107.598,133.580)
C2': (-32.488,105.638,134.843)
C2: (-35.752,105.096,131.553)
N1: (-37.013,104.676,131.717)
N3: (-34.922,105.617,132.444)
N6: (-38.826,104.355,133.113)
N7: (-37.063,105.553,135.301)
N9: (-34.965,106.159,134.808)
O5': (-30.635,107.450,131.700)
O3': (-30.758,107.133,135.568)
Image (generated by PyMOL):