Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1557:A1554
Extra
PDB:
ATOM 1 O3' A A1556 -38.894 -64.718 11.190 1.00 18.43 O
ATOM 2 P C A1557 -39.617 -63.318 10.959 1.00 2.11 P
ATOM 3 OP1 C A1557 -38.759 -62.542 10.059 1.00 19.77 O
ATOM 4 OP2 C A1557 -39.957 -62.776 12.290 1.00 19.77 O
ATOM 5 O5' C A1557 -40.935 -63.670 10.147 1.00 3.56 O
ATOM 6 C5' C A1557 -42.168 -63.784 10.817 1.00 3.56 C
ATOM 7 C4' C A1557 -43.301 -63.328 9.936 1.00 3.56 C
ATOM 8 O4' C A1557 -44.451 -63.270 10.810 1.00 3.56 O
ATOM 9 C3' C A1557 -43.164 -61.939 9.311 1.00 3.56 C
ATOM 10 O3' C A1557 -44.004 -61.880 8.141 1.00 3.56 O
ATOM 11 C2' C A1557 -43.768 -61.037 10.387 1.00 3.56 C
ATOM 12 O2' C A1557 -44.397 -59.871 9.880 1.00 3.56 O
ATOM 13 C1' C A1557 -44.847 -61.935 10.988 1.00 3.56 C
ATOM 14 N1 C A1557 -45.054 -61.699 12.423 1.00 37.50 N
ATOM 15 C2 C A1557 -46.221 -61.083 12.825 1.00 37.50 C
ATOM 16 O2 C A1557 -47.037 -60.752 11.967 1.00 37.50 O
ATOM 17 N3 C A1557 -46.438 -60.854 14.132 1.00 37.50 N
ATOM 18 C4 C A1557 -45.523 -61.206 15.024 1.00 37.50 C
ATOM 19 N4 C A1557 -45.771 -60.940 16.305 1.00 37.50 N
ATOM 20 C5 C A1557 -44.311 -61.842 14.645 1.00 37.50 C
ATOM 21 C6 C A1557 -44.120 -62.072 13.345 1.00 37.50 C
ATOM 22 P A A1558 -43.418 -61.383 6.724 1.00 0.79 P
ATOM 23 OP1 A A1558 -44.487 -61.624 5.734 1.00 0.79 O
ATOM 24 OP2 A A1558 -42.084 -61.977 6.526 1.00 0.79 O
ATOM 25 O5' A A1558 -43.289 -59.792 6.786 1.00 9.28 O
TER
ATOM 1 O3' G B1553 -48.163 -58.799 18.879 1.00 4.88 O
ATOM 2 P A B1554 -48.791 -60.192 18.350 1.00 11.58 P
ATOM 3 OP1 A B1554 -48.994 -60.112 16.860 1.00 14.10 O
ATOM 4 OP2 A B1554 -49.910 -60.610 19.204 1.00 14.10 O
ATOM 5 O5' A B1554 -47.637 -61.212 18.686 1.00 0.79 O
ATOM 6 C5' A B1554 -47.217 -61.363 20.023 1.00 0.79 C
ATOM 7 C4' A B1554 -47.185 -62.818 20.393 1.00 0.79 C
ATOM 8 O4' A B1554 -48.507 -63.406 20.314 1.00 0.79 O
ATOM 9 C3' A B1554 -46.354 -63.737 19.512 1.00 0.79 C
ATOM 10 O3' A B1554 -45.003 -63.714 19.907 1.00 0.79 O
ATOM 11 C2' A B1554 -46.891 -65.109 19.882 1.00 0.79 C
ATOM 12 O2' A B1554 -46.199 -65.598 21.016 1.00 0.79 O
ATOM 13 C1' A B1554 -48.346 -64.809 20.266 1.00 0.79 C
ATOM 14 N9 A B1554 -49.335 -65.427 19.387 1.00 45.23 N
ATOM 15 C8 A B1554 -49.961 -66.612 19.647 1.00 45.23 C
ATOM 16 N7 A B1554 -50.763 -67.010 18.697 1.00 45.23 N
ATOM 17 C5 A B1554 -50.673 -66.014 17.754 1.00 45.23 C
ATOM 18 C6 A B1554 -51.285 -65.859 16.520 1.00 45.23 C
ATOM 19 N6 A B1554 -52.132 -66.750 16.007 1.00 45.23 N
ATOM 20 N1 A B1554 -50.996 -64.743 15.813 1.00 45.23 N
ATOM 21 C2 A B1554 -50.131 -63.853 16.342 1.00 45.23 C
ATOM 22 N3 A B1554 -49.483 -63.902 17.507 1.00 45.23 N
ATOM 23 C4 A B1554 -49.804 -65.021 18.169 1.00 45.23 C
ATOM 24 P C B1555 -43.848 -63.806 18.807 1.00 18.85 P
ATOM 25 OP1 C B1555 -42.665 -64.388 19.477 1.00 26.16 O
ATOM 26 OP2 C B1555 -43.743 -62.470 18.192 1.00 26.16 O
ATOM 27 O5' C B1555 -44.394 -64.855 17.745 1.00 0.79 O
TER
ATOM 2 P C A1557 -39.617 -63.318 10.959 1.00 2.11 P
ATOM 3 OP1 C A1557 -38.759 -62.542 10.059 1.00 19.77 O
ATOM 4 OP2 C A1557 -39.957 -62.776 12.290 1.00 19.77 O
ATOM 5 O5' C A1557 -40.935 -63.670 10.147 1.00 3.56 O
ATOM 6 C5' C A1557 -42.168 -63.784 10.817 1.00 3.56 C
ATOM 7 C4' C A1557 -43.301 -63.328 9.936 1.00 3.56 C
ATOM 8 O4' C A1557 -44.451 -63.270 10.810 1.00 3.56 O
ATOM 9 C3' C A1557 -43.164 -61.939 9.311 1.00 3.56 C
ATOM 10 O3' C A1557 -44.004 -61.880 8.141 1.00 3.56 O
ATOM 11 C2' C A1557 -43.768 -61.037 10.387 1.00 3.56 C
ATOM 12 O2' C A1557 -44.397 -59.871 9.880 1.00 3.56 O
ATOM 13 C1' C A1557 -44.847 -61.935 10.988 1.00 3.56 C
ATOM 14 N1 C A1557 -45.054 -61.699 12.423 1.00 37.50 N
ATOM 15 C2 C A1557 -46.221 -61.083 12.825 1.00 37.50 C
ATOM 16 O2 C A1557 -47.037 -60.752 11.967 1.00 37.50 O
ATOM 17 N3 C A1557 -46.438 -60.854 14.132 1.00 37.50 N
ATOM 18 C4 C A1557 -45.523 -61.206 15.024 1.00 37.50 C
ATOM 19 N4 C A1557 -45.771 -60.940 16.305 1.00 37.50 N
ATOM 20 C5 C A1557 -44.311 -61.842 14.645 1.00 37.50 C
ATOM 21 C6 C A1557 -44.120 -62.072 13.345 1.00 37.50 C
ATOM 22 P A A1558 -43.418 -61.383 6.724 1.00 0.79 P
ATOM 23 OP1 A A1558 -44.487 -61.624 5.734 1.00 0.79 O
ATOM 24 OP2 A A1558 -42.084 -61.977 6.526 1.00 0.79 O
ATOM 25 O5' A A1558 -43.289 -59.792 6.786 1.00 9.28 O
TER
ATOM 1 O3' G B1553 -48.163 -58.799 18.879 1.00 4.88 O
ATOM 2 P A B1554 -48.791 -60.192 18.350 1.00 11.58 P
ATOM 3 OP1 A B1554 -48.994 -60.112 16.860 1.00 14.10 O
ATOM 4 OP2 A B1554 -49.910 -60.610 19.204 1.00 14.10 O
ATOM 5 O5' A B1554 -47.637 -61.212 18.686 1.00 0.79 O
ATOM 6 C5' A B1554 -47.217 -61.363 20.023 1.00 0.79 C
ATOM 7 C4' A B1554 -47.185 -62.818 20.393 1.00 0.79 C
ATOM 8 O4' A B1554 -48.507 -63.406 20.314 1.00 0.79 O
ATOM 9 C3' A B1554 -46.354 -63.737 19.512 1.00 0.79 C
ATOM 10 O3' A B1554 -45.003 -63.714 19.907 1.00 0.79 O
ATOM 11 C2' A B1554 -46.891 -65.109 19.882 1.00 0.79 C
ATOM 12 O2' A B1554 -46.199 -65.598 21.016 1.00 0.79 O
ATOM 13 C1' A B1554 -48.346 -64.809 20.266 1.00 0.79 C
ATOM 14 N9 A B1554 -49.335 -65.427 19.387 1.00 45.23 N
ATOM 15 C8 A B1554 -49.961 -66.612 19.647 1.00 45.23 C
ATOM 16 N7 A B1554 -50.763 -67.010 18.697 1.00 45.23 N
ATOM 17 C5 A B1554 -50.673 -66.014 17.754 1.00 45.23 C
ATOM 18 C6 A B1554 -51.285 -65.859 16.520 1.00 45.23 C
ATOM 19 N6 A B1554 -52.132 -66.750 16.007 1.00 45.23 N
ATOM 20 N1 A B1554 -50.996 -64.743 15.813 1.00 45.23 N
ATOM 21 C2 A B1554 -50.131 -63.853 16.342 1.00 45.23 C
ATOM 22 N3 A B1554 -49.483 -63.902 17.507 1.00 45.23 N
ATOM 23 C4 A B1554 -49.804 -65.021 18.169 1.00 45.23 C
ATOM 24 P C B1555 -43.848 -63.806 18.807 1.00 18.85 P
ATOM 25 OP1 C B1555 -42.665 -64.388 19.477 1.00 26.16 O
ATOM 26 OP2 C B1555 -43.743 -62.470 18.192 1.00 26.16 O
ATOM 27 O5' C B1555 -44.394 -64.855 17.745 1.00 0.79 O
TER
Atoms:
C2: (-46.221,-61.083,12.825)
OP1: (-38.759,-62.542,10.059)
OP2: (-39.957,-62.776,12.290)
C4: (-45.523,-61.206,15.024)
O5': (-40.935,-63.670,10.147)
C3': (-43.164,-61.939,9.311)
C1': (-44.847,-61.935,10.988)
O4': (-44.451,-63.270,10.810)
C5': (-42.168,-63.784,10.817)
P: (-39.617,-63.318,10.959)
O2: (-47.037,-60.752,11.967)
C4': (-43.301,-63.328,9.936)
C2': (-43.768,-61.037,10.387)
O2': (-44.397,-59.871,9.880)
N1: (-45.054,-61.699,12.423)
N3: (-46.438,-60.854,14.132)
N4: (-45.771,-60.940,16.305)
C6: (-44.120,-62.072,13.345)
C5: (-44.311,-61.842,14.645)
O3': (-44.004,-61.880,8.141)
OP1: (-38.759,-62.542,10.059)
OP2: (-39.957,-62.776,12.290)
C4: (-45.523,-61.206,15.024)
O5': (-40.935,-63.670,10.147)
C3': (-43.164,-61.939,9.311)
C1': (-44.847,-61.935,10.988)
O4': (-44.451,-63.270,10.810)
C5': (-42.168,-63.784,10.817)
P: (-39.617,-63.318,10.959)
O2: (-47.037,-60.752,11.967)
C4': (-43.301,-63.328,9.936)
C2': (-43.768,-61.037,10.387)
O2': (-44.397,-59.871,9.880)
N1: (-45.054,-61.699,12.423)
N3: (-46.438,-60.854,14.132)
N4: (-45.771,-60.940,16.305)
C6: (-44.120,-62.072,13.345)
C5: (-44.311,-61.842,14.645)
O3': (-44.004,-61.880,8.141)
OP1: (-48.994,-60.112,16.860)
OP2: (-49.910,-60.610,19.204)
C3': (-46.354,-63.737,19.512)
C1': (-48.346,-64.809,20.266)
C5': (-47.217,-61.363,20.023)
O4': (-48.507,-63.406,20.314)
C8: (-49.961,-66.612,19.647)
O2': (-46.199,-65.598,21.016)
C6: (-51.285,-65.859,16.520)
C5: (-50.673,-66.014,17.754)
C4: (-49.804,-65.021,18.169)
P: (-48.791,-60.192,18.350)
C4': (-47.185,-62.818,20.393)
C2': (-46.891,-65.109,19.882)
C2: (-50.131,-63.853,16.342)
N1: (-50.996,-64.743,15.813)
N3: (-49.483,-63.902,17.507)
N6: (-52.132,-66.750,16.007)
N7: (-50.763,-67.010,18.697)
N9: (-49.335,-65.427,19.387)
O5': (-47.637,-61.212,18.686)
O3': (-45.003,-63.714,19.907)
OP2: (-49.910,-60.610,19.204)
C3': (-46.354,-63.737,19.512)
C1': (-48.346,-64.809,20.266)
C5': (-47.217,-61.363,20.023)
O4': (-48.507,-63.406,20.314)
C8: (-49.961,-66.612,19.647)
O2': (-46.199,-65.598,21.016)
C6: (-51.285,-65.859,16.520)
C5: (-50.673,-66.014,17.754)
C4: (-49.804,-65.021,18.169)
P: (-48.791,-60.192,18.350)
C4': (-47.185,-62.818,20.393)
C2': (-46.891,-65.109,19.882)
C2: (-50.131,-63.853,16.342)
N1: (-50.996,-64.743,15.813)
N3: (-49.483,-63.902,17.507)
N6: (-52.132,-66.750,16.007)
N7: (-50.763,-67.010,18.697)
N9: (-49.335,-65.427,19.387)
O5': (-47.637,-61.212,18.686)
O3': (-45.003,-63.714,19.907)
Image (generated by PyMOL):