Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1587:A1223
Extra
PDB:
ATOM 1 O3' G A1586 -33.232 -65.866 -2.000 1.00 1.14 O
ATOM 2 P C A1587 -33.412 -67.157 -1.063 1.00 29.07 P
ATOM 3 OP1 C A1587 -32.090 -67.491 -0.457 1.00 46.30 O
ATOM 4 OP2 C A1587 -34.158 -68.197 -1.825 1.00 46.30 O
ATOM 5 O5' C A1587 -34.375 -66.637 0.093 1.00 28.28 O
ATOM 6 C5' C A1587 -33.839 -66.096 1.310 1.00 28.28 C
ATOM 7 C4' C A1587 -34.770 -65.055 1.866 1.00 28.28 C
ATOM 8 O4' C A1587 -34.767 -63.893 1.008 1.00 28.28 O
ATOM 9 C3' C A1587 -36.226 -65.464 1.968 1.00 28.28 C
ATOM 10 O3' C A1587 -36.417 -66.153 3.205 1.00 28.28 O
ATOM 11 C2' C A1587 -36.956 -64.118 1.933 1.00 28.28 C
ATOM 12 O2' C A1587 -37.016 -63.512 3.208 1.00 28.28 O
ATOM 13 C1' C A1587 -36.023 -63.251 1.082 1.00 28.28 C
ATOM 14 N1 C A1587 -36.460 -62.877 -0.281 1.00 53.26 N
ATOM 15 C2 C A1587 -36.788 -61.539 -0.543 1.00 53.26 C
ATOM 16 O2 C A1587 -36.758 -60.716 0.381 1.00 53.26 O
ATOM 17 N3 C A1587 -37.130 -61.177 -1.795 1.00 53.26 N
ATOM 18 C4 C A1587 -37.161 -62.087 -2.767 1.00 53.26 C
ATOM 19 N4 C A1587 -37.475 -61.678 -3.995 1.00 53.26 N
ATOM 20 C5 C A1587 -36.864 -63.455 -2.527 1.00 53.26 C
ATOM 21 C6 C A1587 -36.523 -63.806 -1.281 1.00 53.26 C
ATOM 22 P G A1588 -37.660 -67.150 3.390 1.00 30.39 P
ATOM 23 OP1 G A1588 -38.868 -66.567 2.752 1.00 40.70 O
ATOM 24 OP2 G A1588 -37.709 -67.568 4.813 1.00 40.70 O
ATOM 25 O5' G A1588 -37.267 -68.385 2.485 1.00 0.79 O
TER
ATOM 1 O3' U B1222 -39.463 -60.393 -6.555 1.00 12.00 O
ATOM 2 P A B1223 -39.244 -59.111 -5.624 1.00 35.06 P
ATOM 3 OP1 A B1223 -39.496 -59.530 -4.219 1.00 59.12 O
ATOM 4 OP2 A B1223 -40.010 -57.982 -6.208 1.00 59.14 O
ATOM 5 O5' A B1223 -37.694 -58.802 -5.822 1.00 12.19 O
ATOM 6 C5' A B1223 -37.172 -58.541 -7.135 1.00 12.19 C
ATOM 7 C4' A B1223 -35.864 -59.269 -7.338 1.00 12.19 C
ATOM 8 O4' A B1223 -34.828 -58.656 -6.528 1.00 12.19 O
ATOM 9 C3' A B1223 -35.851 -60.753 -6.994 1.00 12.19 C
ATOM 10 O3' A B1223 -36.273 -61.506 -8.137 1.00 12.19 O
ATOM 11 C2' A B1223 -34.380 -60.996 -6.680 1.00 12.19 C
ATOM 12 O2' A B1223 -33.657 -61.205 -7.871 1.00 12.19 O
ATOM 13 C1' A B1223 -33.946 -59.654 -6.066 1.00 12.19 C
ATOM 14 N9 A B1223 -34.024 -59.642 -4.616 1.00 9.83 N
ATOM 15 C8 A B1223 -35.142 -59.400 -3.847 1.00 9.90 C
ATOM 16 N7 A B1223 -34.922 -59.475 -2.557 1.00 9.98 N
ATOM 17 C5 A B1223 -33.569 -59.779 -2.472 1.00 10.00 C
ATOM 18 C6 A B1223 -32.729 -60.000 -1.387 1.00 10.08 C
ATOM 19 N6 A B1223 -33.132 -59.921 -0.123 1.00 10.01 N
ATOM 20 N1 A B1223 -31.441 -60.309 -1.641 1.00 10.08 N
ATOM 21 C2 A B1223 -31.038 -60.377 -2.907 1.00 10.08 C
ATOM 22 N3 A B1223 -31.729 -60.177 -4.018 1.00 10.00 N
ATOM 23 C4 A B1223 -33.005 -59.882 -3.731 1.00 9.90 C
ATOM 24 P A B1224 -36.995 -62.932 -7.949 1.00 25.37 P
ATOM 25 OP1 A B1224 -37.849 -63.192 -9.131 1.00 23.56 O
ATOM 26 OP2 A B1224 -37.582 -63.047 -6.589 1.00 23.64 O
ATOM 27 O5' A B1224 -35.798 -63.978 -8.057 1.00 0.79 O
TER
ATOM 2 P C A1587 -33.412 -67.157 -1.063 1.00 29.07 P
ATOM 3 OP1 C A1587 -32.090 -67.491 -0.457 1.00 46.30 O
ATOM 4 OP2 C A1587 -34.158 -68.197 -1.825 1.00 46.30 O
ATOM 5 O5' C A1587 -34.375 -66.637 0.093 1.00 28.28 O
ATOM 6 C5' C A1587 -33.839 -66.096 1.310 1.00 28.28 C
ATOM 7 C4' C A1587 -34.770 -65.055 1.866 1.00 28.28 C
ATOM 8 O4' C A1587 -34.767 -63.893 1.008 1.00 28.28 O
ATOM 9 C3' C A1587 -36.226 -65.464 1.968 1.00 28.28 C
ATOM 10 O3' C A1587 -36.417 -66.153 3.205 1.00 28.28 O
ATOM 11 C2' C A1587 -36.956 -64.118 1.933 1.00 28.28 C
ATOM 12 O2' C A1587 -37.016 -63.512 3.208 1.00 28.28 O
ATOM 13 C1' C A1587 -36.023 -63.251 1.082 1.00 28.28 C
ATOM 14 N1 C A1587 -36.460 -62.877 -0.281 1.00 53.26 N
ATOM 15 C2 C A1587 -36.788 -61.539 -0.543 1.00 53.26 C
ATOM 16 O2 C A1587 -36.758 -60.716 0.381 1.00 53.26 O
ATOM 17 N3 C A1587 -37.130 -61.177 -1.795 1.00 53.26 N
ATOM 18 C4 C A1587 -37.161 -62.087 -2.767 1.00 53.26 C
ATOM 19 N4 C A1587 -37.475 -61.678 -3.995 1.00 53.26 N
ATOM 20 C5 C A1587 -36.864 -63.455 -2.527 1.00 53.26 C
ATOM 21 C6 C A1587 -36.523 -63.806 -1.281 1.00 53.26 C
ATOM 22 P G A1588 -37.660 -67.150 3.390 1.00 30.39 P
ATOM 23 OP1 G A1588 -38.868 -66.567 2.752 1.00 40.70 O
ATOM 24 OP2 G A1588 -37.709 -67.568 4.813 1.00 40.70 O
ATOM 25 O5' G A1588 -37.267 -68.385 2.485 1.00 0.79 O
TER
ATOM 1 O3' U B1222 -39.463 -60.393 -6.555 1.00 12.00 O
ATOM 2 P A B1223 -39.244 -59.111 -5.624 1.00 35.06 P
ATOM 3 OP1 A B1223 -39.496 -59.530 -4.219 1.00 59.12 O
ATOM 4 OP2 A B1223 -40.010 -57.982 -6.208 1.00 59.14 O
ATOM 5 O5' A B1223 -37.694 -58.802 -5.822 1.00 12.19 O
ATOM 6 C5' A B1223 -37.172 -58.541 -7.135 1.00 12.19 C
ATOM 7 C4' A B1223 -35.864 -59.269 -7.338 1.00 12.19 C
ATOM 8 O4' A B1223 -34.828 -58.656 -6.528 1.00 12.19 O
ATOM 9 C3' A B1223 -35.851 -60.753 -6.994 1.00 12.19 C
ATOM 10 O3' A B1223 -36.273 -61.506 -8.137 1.00 12.19 O
ATOM 11 C2' A B1223 -34.380 -60.996 -6.680 1.00 12.19 C
ATOM 12 O2' A B1223 -33.657 -61.205 -7.871 1.00 12.19 O
ATOM 13 C1' A B1223 -33.946 -59.654 -6.066 1.00 12.19 C
ATOM 14 N9 A B1223 -34.024 -59.642 -4.616 1.00 9.83 N
ATOM 15 C8 A B1223 -35.142 -59.400 -3.847 1.00 9.90 C
ATOM 16 N7 A B1223 -34.922 -59.475 -2.557 1.00 9.98 N
ATOM 17 C5 A B1223 -33.569 -59.779 -2.472 1.00 10.00 C
ATOM 18 C6 A B1223 -32.729 -60.000 -1.387 1.00 10.08 C
ATOM 19 N6 A B1223 -33.132 -59.921 -0.123 1.00 10.01 N
ATOM 20 N1 A B1223 -31.441 -60.309 -1.641 1.00 10.08 N
ATOM 21 C2 A B1223 -31.038 -60.377 -2.907 1.00 10.08 C
ATOM 22 N3 A B1223 -31.729 -60.177 -4.018 1.00 10.00 N
ATOM 23 C4 A B1223 -33.005 -59.882 -3.731 1.00 9.90 C
ATOM 24 P A B1224 -36.995 -62.932 -7.949 1.00 25.37 P
ATOM 25 OP1 A B1224 -37.849 -63.192 -9.131 1.00 23.56 O
ATOM 26 OP2 A B1224 -37.582 -63.047 -6.589 1.00 23.64 O
ATOM 27 O5' A B1224 -35.798 -63.978 -8.057 1.00 0.79 O
TER
Atoms:
C2: (-36.788,-61.539,-0.543)
OP1: (-32.090,-67.491,-0.457)
OP2: (-34.158,-68.197,-1.825)
C4: (-37.161,-62.087,-2.767)
O5': (-34.375,-66.637,0.093)
C3': (-36.226,-65.464,1.968)
C1': (-36.023,-63.251,1.082)
O4': (-34.767,-63.893,1.008)
C5': (-33.839,-66.096,1.310)
P: (-33.412,-67.157,-1.063)
O2: (-36.758,-60.716,0.381)
C4': (-34.770,-65.055,1.866)
C2': (-36.956,-64.118,1.933)
O2': (-37.016,-63.512,3.208)
N1: (-36.460,-62.877,-0.281)
N3: (-37.130,-61.177,-1.795)
N4: (-37.475,-61.678,-3.995)
C6: (-36.523,-63.806,-1.281)
C5: (-36.864,-63.455,-2.527)
O3': (-36.417,-66.153,3.205)
OP1: (-32.090,-67.491,-0.457)
OP2: (-34.158,-68.197,-1.825)
C4: (-37.161,-62.087,-2.767)
O5': (-34.375,-66.637,0.093)
C3': (-36.226,-65.464,1.968)
C1': (-36.023,-63.251,1.082)
O4': (-34.767,-63.893,1.008)
C5': (-33.839,-66.096,1.310)
P: (-33.412,-67.157,-1.063)
O2: (-36.758,-60.716,0.381)
C4': (-34.770,-65.055,1.866)
C2': (-36.956,-64.118,1.933)
O2': (-37.016,-63.512,3.208)
N1: (-36.460,-62.877,-0.281)
N3: (-37.130,-61.177,-1.795)
N4: (-37.475,-61.678,-3.995)
C6: (-36.523,-63.806,-1.281)
C5: (-36.864,-63.455,-2.527)
O3': (-36.417,-66.153,3.205)
OP1: (-39.496,-59.530,-4.219)
OP2: (-40.010,-57.982,-6.208)
C3': (-35.851,-60.753,-6.994)
C1': (-33.946,-59.654,-6.066)
C5': (-37.172,-58.541,-7.135)
O4': (-34.828,-58.656,-6.528)
C8: (-35.142,-59.400,-3.847)
O2': (-33.657,-61.205,-7.871)
C6: (-32.729,-60.000,-1.387)
C5: (-33.569,-59.779,-2.472)
C4: (-33.005,-59.882,-3.731)
P: (-39.244,-59.111,-5.624)
C4': (-35.864,-59.269,-7.338)
C2': (-34.380,-60.996,-6.680)
C2: (-31.038,-60.377,-2.907)
N1: (-31.441,-60.309,-1.641)
N3: (-31.729,-60.177,-4.018)
N6: (-33.132,-59.921,-0.123)
N7: (-34.922,-59.475,-2.557)
N9: (-34.024,-59.642,-4.616)
O5': (-37.694,-58.802,-5.822)
O3': (-36.273,-61.506,-8.137)
OP2: (-40.010,-57.982,-6.208)
C3': (-35.851,-60.753,-6.994)
C1': (-33.946,-59.654,-6.066)
C5': (-37.172,-58.541,-7.135)
O4': (-34.828,-58.656,-6.528)
C8: (-35.142,-59.400,-3.847)
O2': (-33.657,-61.205,-7.871)
C6: (-32.729,-60.000,-1.387)
C5: (-33.569,-59.779,-2.472)
C4: (-33.005,-59.882,-3.731)
P: (-39.244,-59.111,-5.624)
C4': (-35.864,-59.269,-7.338)
C2': (-34.380,-60.996,-6.680)
C2: (-31.038,-60.377,-2.907)
N1: (-31.441,-60.309,-1.641)
N3: (-31.729,-60.177,-4.018)
N6: (-33.132,-59.921,-0.123)
N7: (-34.922,-59.475,-2.557)
N9: (-34.024,-59.642,-4.616)
O5': (-37.694,-58.802,-5.822)
O3': (-36.273,-61.506,-8.137)
Image (generated by PyMOL):