Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
300D:B13:B12
Extra
PDB:
ATOM 1 O3' U A 12 33.108 -3.228 5.839 1.00 32.58 O
ATOM 2 P A A 13 32.681 -3.315 7.382 1.00 36.30 P
ATOM 3 OP1 A A 13 31.242 -2.916 7.479 1.00 34.68 O
ATOM 4 OP2 A A 13 33.717 -2.583 8.182 1.00 31.68 O
ATOM 5 O5' A A 13 32.791 -4.873 7.702 1.00 34.89 O
ATOM 6 C5' A A 13 31.993 -5.824 6.991 1.00 29.94 C
ATOM 7 C4' A A 13 32.710 -7.152 6.930 1.00 25.33 C
ATOM 8 O4' A A 13 34.006 -6.915 6.352 1.00 20.32 O
ATOM 9 C3' A A 13 32.980 -7.837 8.267 1.00 28.01 C
ATOM 10 O3' A A 13 31.857 -8.697 8.541 1.00 35.79 O
ATOM 11 C2' A A 13 34.256 -8.626 7.982 1.00 20.86 C
ATOM 12 O2' A A 13 33.999 -9.827 7.296 1.00 20.96 O
ATOM 13 C1' A A 13 34.961 -7.723 6.979 1.00 14.98 C
ATOM 14 N9 A A 13 36.004 -6.845 7.473 1.00 8.68 N
ATOM 15 C8 A A 13 35.901 -5.584 7.983 1.00 7.71 C
ATOM 16 N7 A A 13 37.057 -5.043 8.279 1.00 10.37 N
ATOM 17 C5 A A 13 37.978 -6.024 7.943 1.00 8.76 C
ATOM 18 C6 A A 13 39.385 -6.082 8.012 1.00 10.08 C
ATOM 19 N6 A A 13 40.169 -5.095 8.448 1.00 4.06 N
ATOM 20 N1 A A 13 39.975 -7.215 7.606 1.00 16.06 N
ATOM 21 C2 A A 13 39.207 -8.219 7.167 1.00 16.94 C
ATOM 22 N3 A A 13 37.893 -8.285 7.061 1.00 11.11 N
ATOM 23 C4 A A 13 37.335 -7.141 7.464 1.00 8.03 C
ATOM 24 P A A 14 31.486 -9.111 10.057 1.00 36.30 P
ATOM 25 OP1 A A 14 30.305 -10.031 9.981 1.00 30.75 O
ATOM 26 OP2 A A 14 31.424 -7.909 10.924 1.00 34.72 O
ATOM 27 O5' A A 14 32.761 -9.946 10.501 1.00 34.73 O
TER
ATOM 1 O3' G B 11 37.268 0.081 8.300 1.00 31.17 O
ATOM 2 P U B 12 36.946 0.014 6.716 1.00 31.71 P
ATOM 3 OP1 U B 12 38.007 -0.752 6.025 1.00 32.56 O
ATOM 4 OP2 U B 12 36.619 1.382 6.251 1.00 28.70 O
ATOM 5 O5' U B 12 35.643 -0.869 6.609 1.00 22.65 O
ATOM 6 C5' U B 12 34.756 -0.650 5.562 1.00 17.80 C
ATOM 7 C4' U B 12 34.696 -1.862 4.719 1.00 18.74 C
ATOM 8 O4' U B 12 35.989 -2.100 4.139 1.00 18.98 O
ATOM 9 C3' U B 12 34.475 -3.124 5.506 1.00 24.75 C
ATOM 10 O3' U B 12 33.108 -3.228 5.839 1.00 32.58 O
ATOM 11 C2' U B 12 34.923 -4.184 4.513 1.00 24.86 C
ATOM 12 O2' U B 12 33.933 -4.528 3.561 1.00 24.88 O
ATOM 13 C1' U B 12 36.096 -3.476 3.831 1.00 22.51 C
ATOM 14 N1 U B 12 37.393 -3.959 4.303 1.00 22.54 N
ATOM 15 C2 U B 12 37.661 -5.290 4.136 1.00 25.58 C
ATOM 16 O2 U B 12 36.904 -6.040 3.547 1.00 29.13 O
ATOM 17 N3 U B 12 38.853 -5.712 4.659 1.00 27.50 N
ATOM 18 C4 U B 12 39.799 -4.935 5.288 1.00 33.46 C
ATOM 19 O4 U B 12 40.800 -5.468 5.787 1.00 37.06 O
ATOM 20 C5 U B 12 39.461 -3.546 5.371 1.00 33.54 C
ATOM 21 C6 U B 12 38.291 -3.122 4.893 1.00 25.86 C
ATOM 22 P A B 13 32.681 -3.315 7.382 1.00 36.30 P
ATOM 23 OP1 A B 13 31.242 -2.916 7.479 1.00 34.68 O
ATOM 24 OP2 A B 13 33.717 -2.583 8.182 1.00 31.68 O
ATOM 25 O5' A B 13 32.791 -4.873 7.702 1.00 34.89 O
TER
ATOM 2 P A A 13 32.681 -3.315 7.382 1.00 36.30 P
ATOM 3 OP1 A A 13 31.242 -2.916 7.479 1.00 34.68 O
ATOM 4 OP2 A A 13 33.717 -2.583 8.182 1.00 31.68 O
ATOM 5 O5' A A 13 32.791 -4.873 7.702 1.00 34.89 O
ATOM 6 C5' A A 13 31.993 -5.824 6.991 1.00 29.94 C
ATOM 7 C4' A A 13 32.710 -7.152 6.930 1.00 25.33 C
ATOM 8 O4' A A 13 34.006 -6.915 6.352 1.00 20.32 O
ATOM 9 C3' A A 13 32.980 -7.837 8.267 1.00 28.01 C
ATOM 10 O3' A A 13 31.857 -8.697 8.541 1.00 35.79 O
ATOM 11 C2' A A 13 34.256 -8.626 7.982 1.00 20.86 C
ATOM 12 O2' A A 13 33.999 -9.827 7.296 1.00 20.96 O
ATOM 13 C1' A A 13 34.961 -7.723 6.979 1.00 14.98 C
ATOM 14 N9 A A 13 36.004 -6.845 7.473 1.00 8.68 N
ATOM 15 C8 A A 13 35.901 -5.584 7.983 1.00 7.71 C
ATOM 16 N7 A A 13 37.057 -5.043 8.279 1.00 10.37 N
ATOM 17 C5 A A 13 37.978 -6.024 7.943 1.00 8.76 C
ATOM 18 C6 A A 13 39.385 -6.082 8.012 1.00 10.08 C
ATOM 19 N6 A A 13 40.169 -5.095 8.448 1.00 4.06 N
ATOM 20 N1 A A 13 39.975 -7.215 7.606 1.00 16.06 N
ATOM 21 C2 A A 13 39.207 -8.219 7.167 1.00 16.94 C
ATOM 22 N3 A A 13 37.893 -8.285 7.061 1.00 11.11 N
ATOM 23 C4 A A 13 37.335 -7.141 7.464 1.00 8.03 C
ATOM 24 P A A 14 31.486 -9.111 10.057 1.00 36.30 P
ATOM 25 OP1 A A 14 30.305 -10.031 9.981 1.00 30.75 O
ATOM 26 OP2 A A 14 31.424 -7.909 10.924 1.00 34.72 O
ATOM 27 O5' A A 14 32.761 -9.946 10.501 1.00 34.73 O
TER
ATOM 1 O3' G B 11 37.268 0.081 8.300 1.00 31.17 O
ATOM 2 P U B 12 36.946 0.014 6.716 1.00 31.71 P
ATOM 3 OP1 U B 12 38.007 -0.752 6.025 1.00 32.56 O
ATOM 4 OP2 U B 12 36.619 1.382 6.251 1.00 28.70 O
ATOM 5 O5' U B 12 35.643 -0.869 6.609 1.00 22.65 O
ATOM 6 C5' U B 12 34.756 -0.650 5.562 1.00 17.80 C
ATOM 7 C4' U B 12 34.696 -1.862 4.719 1.00 18.74 C
ATOM 8 O4' U B 12 35.989 -2.100 4.139 1.00 18.98 O
ATOM 9 C3' U B 12 34.475 -3.124 5.506 1.00 24.75 C
ATOM 10 O3' U B 12 33.108 -3.228 5.839 1.00 32.58 O
ATOM 11 C2' U B 12 34.923 -4.184 4.513 1.00 24.86 C
ATOM 12 O2' U B 12 33.933 -4.528 3.561 1.00 24.88 O
ATOM 13 C1' U B 12 36.096 -3.476 3.831 1.00 22.51 C
ATOM 14 N1 U B 12 37.393 -3.959 4.303 1.00 22.54 N
ATOM 15 C2 U B 12 37.661 -5.290 4.136 1.00 25.58 C
ATOM 16 O2 U B 12 36.904 -6.040 3.547 1.00 29.13 O
ATOM 17 N3 U B 12 38.853 -5.712 4.659 1.00 27.50 N
ATOM 18 C4 U B 12 39.799 -4.935 5.288 1.00 33.46 C
ATOM 19 O4 U B 12 40.800 -5.468 5.787 1.00 37.06 O
ATOM 20 C5 U B 12 39.461 -3.546 5.371 1.00 33.54 C
ATOM 21 C6 U B 12 38.291 -3.122 4.893 1.00 25.86 C
ATOM 22 P A B 13 32.681 -3.315 7.382 1.00 36.30 P
ATOM 23 OP1 A B 13 31.242 -2.916 7.479 1.00 34.68 O
ATOM 24 OP2 A B 13 33.717 -2.583 8.182 1.00 31.68 O
ATOM 25 O5' A B 13 32.791 -4.873 7.702 1.00 34.89 O
TER
Atoms:
OP1: (31.242,-2.916,7.479)
OP2: (33.717,-2.583,8.182)
C3': (32.980,-7.837,8.267)
C1': (34.961,-7.723,6.979)
C5': (31.993,-5.824,6.991)
O4': (34.006,-6.915,6.352)
C8: (35.901,-5.584,7.983)
O2': (33.999,-9.827,7.296)
C6: (39.385,-6.082,8.012)
C5: (37.978,-6.024,7.943)
C4: (37.335,-7.141,7.464)
P: (32.681,-3.315,7.382)
C4': (32.710,-7.152,6.930)
C2': (34.256,-8.626,7.982)
C2: (39.207,-8.219,7.167)
N1: (39.975,-7.215,7.606)
N3: (37.893,-8.285,7.061)
N6: (40.169,-5.095,8.448)
N7: (37.057,-5.043,8.279)
N9: (36.004,-6.845,7.473)
O5': (32.791,-4.873,7.702)
O3': (31.857,-8.697,8.541)
OP2: (33.717,-2.583,8.182)
C3': (32.980,-7.837,8.267)
C1': (34.961,-7.723,6.979)
C5': (31.993,-5.824,6.991)
O4': (34.006,-6.915,6.352)
C8: (35.901,-5.584,7.983)
O2': (33.999,-9.827,7.296)
C6: (39.385,-6.082,8.012)
C5: (37.978,-6.024,7.943)
C4: (37.335,-7.141,7.464)
P: (32.681,-3.315,7.382)
C4': (32.710,-7.152,6.930)
C2': (34.256,-8.626,7.982)
C2: (39.207,-8.219,7.167)
N1: (39.975,-7.215,7.606)
N3: (37.893,-8.285,7.061)
N6: (40.169,-5.095,8.448)
N7: (37.057,-5.043,8.279)
N9: (36.004,-6.845,7.473)
O5': (32.791,-4.873,7.702)
O3': (31.857,-8.697,8.541)
C4: (39.799,-4.935,5.288)
N3: (38.853,-5.712,4.659)
OP1: (38.007,-0.752,6.025)
OP2: (36.619,1.382,6.251)
C2: (37.661,-5.290,4.136)
C1': (36.096,-3.476,3.831)
C3': (34.475,-3.124,5.506)
O5': (35.643,-0.869,6.609)
O4': (35.989,-2.100,4.139)
C5': (34.756,-0.650,5.562)
P: (36.946,0.014,6.716)
C4': (34.696,-1.862,4.719)
C2': (34.923,-4.184,4.513)
O2': (33.933,-4.528,3.561)
N1: (37.393,-3.959,4.303)
O4: (40.800,-5.468,5.787)
O2: (36.904,-6.040,3.547)
C6: (38.291,-3.122,4.893)
C5: (39.461,-3.546,5.371)
O3': (33.108,-3.228,5.839)
N3: (38.853,-5.712,4.659)
OP1: (38.007,-0.752,6.025)
OP2: (36.619,1.382,6.251)
C2: (37.661,-5.290,4.136)
C1': (36.096,-3.476,3.831)
C3': (34.475,-3.124,5.506)
O5': (35.643,-0.869,6.609)
O4': (35.989,-2.100,4.139)
C5': (34.756,-0.650,5.562)
P: (36.946,0.014,6.716)
C4': (34.696,-1.862,4.719)
C2': (34.923,-4.184,4.513)
O2': (33.933,-4.528,3.561)
N1: (37.393,-3.959,4.303)
O4: (40.800,-5.468,5.787)
O2: (36.904,-6.040,3.547)
C6: (38.291,-3.122,4.893)
C5: (39.461,-3.546,5.371)
O3': (33.108,-3.228,5.839)
Image (generated by PyMOL):