ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A26:A25

Extra

PDB:
ATOM 1 O3' U A 25 35.758 6.176 94.145 1.00 69.63 O
ATOM 2 P A A 26 34.334 6.282 94.868 1.00 65.09 P
ATOM 3 OP1 A A 26 34.467 7.316 95.920 1.00 64.07 O
ATOM 4 OP2 A A 26 33.905 4.905 95.234 1.00 69.69 O
ATOM 5 O5' A A 26 33.364 6.859 93.746 1.00 62.08 O
ATOM 6 C5' A A 26 33.418 8.239 93.428 1.00 62.92 C
ATOM 7 C4' A A 26 33.044 8.477 91.988 1.00 60.78 C
ATOM 8 O4' A A 26 33.633 7.431 91.176 1.00 58.47 O
ATOM 9 C3' A A 26 31.563 8.407 91.668 1.00 57.17 C
ATOM 10 O3' A A 26 30.969 9.681 91.886 1.00 58.28 O
ATOM 11 C2' A A 26 31.588 8.084 90.184 1.00 60.17 C
ATOM 12 O2' A A 26 31.884 9.238 89.424 1.00 63.12 O
ATOM 13 C1' A A 26 32.779 7.131 90.097 1.00 56.01 C
ATOM 14 N9 A A 26 32.444 5.714 90.173 1.00 57.21 N
ATOM 15 C8 A A 26 32.308 4.956 91.303 1.00 59.46 C
ATOM 16 N7 A A 26 32.040 3.694 91.063 1.00 62.60 N
ATOM 17 C5 A A 26 31.988 3.620 89.680 1.00 63.90 C
ATOM 18 C6 A A 26 31.753 2.548 88.800 1.00 67.34 C
ATOM 19 N6 A A 26 31.512 1.301 89.204 1.00 68.23 N
ATOM 20 N1 A A 26 31.775 2.806 87.474 1.00 71.05 N
ATOM 21 C2 A A 26 32.011 4.065 87.072 1.00 69.78 C
ATOM 22 N3 A A 26 32.244 5.157 87.805 1.00 66.21 N
ATOM 23 C4 A A 26 32.224 4.861 89.117 1.00 62.79 C
ATOM 24 P A A 27 29.528 9.784 92.603 1.00 66.58 P
ATOM 25 OP1 A A 27 29.354 11.194 93.030 1.00 66.64 O
ATOM 26 OP2 A A 27 29.392 8.698 93.603 1.00 61.41 O
ATOM 27 O5' A A 27 28.481 9.480 91.436 1.00 63.82 O
TER

ATOM 1 O3' G B 24 34.797 0.125 93.545 1.00 74.02 O
ATOM 2 P U B 25 36.217 0.697 94.050 1.00 77.05 P
ATOM 3 OP1 U B 25 37.236 0.408 93.008 1.00 71.49 O
ATOM 4 OP2 U B 25 36.411 0.178 95.438 1.00 70.49 O
ATOM 5 O5' U B 25 35.988 2.280 94.109 1.00 74.43 O
ATOM 6 C5' U B 25 36.975 3.159 94.653 1.00 69.59 C
ATOM 7 C4' U B 25 37.238 4.304 93.699 1.00 71.47 C
ATOM 8 O4' U B 25 37.810 3.771 92.483 1.00 71.10 O
ATOM 9 C3' U B 25 36.019 5.101 93.242 1.00 73.85 C
ATOM 10 O3' U B 25 35.758 6.176 94.145 1.00 69.63 O
ATOM 11 C2' U B 25 36.471 5.656 91.894 1.00 73.12 C
ATOM 12 O2' U B 25 37.234 6.842 91.964 1.00 72.57 O
ATOM 13 C1' U B 25 37.334 4.509 91.369 1.00 72.19 C
ATOM 14 N1 U B 25 36.615 3.588 90.484 1.00 70.36 N
ATOM 15 C2 U B 25 36.284 4.051 89.244 1.00 70.47 C
ATOM 16 O2 U B 25 36.526 5.192 88.890 1.00 66.84 O
ATOM 17 N3 U B 25 35.657 3.136 88.436 1.00 78.13 N
ATOM 18 C4 U B 25 35.330 1.829 88.759 1.00 81.58 C
ATOM 19 O4 U B 25 34.765 1.114 87.924 1.00 86.29 O
ATOM 20 C5 U B 25 35.693 1.437 90.081 1.00 79.68 C
ATOM 21 C6 U B 25 36.304 2.310 90.878 1.00 75.92 C
ATOM 22 P A B 26 34.334 6.282 94.868 1.00 65.09 P
ATOM 23 OP1 A B 26 34.467 7.316 95.920 1.00 64.07 O
ATOM 24 OP2 A B 26 33.905 4.905 95.234 1.00 69.69 O
ATOM 25 O5' A B 26 33.364 6.859 93.746 1.00 62.08 O
TER

Atoms:
OP1: (34.467,7.316,95.920)
OP2: (33.905,4.905,95.234)
C3': (31.563,8.407,91.668)
C1': (32.779,7.131,90.097)
C5': (33.418,8.239,93.428)
O4': (33.633,7.431,91.176)
C8: (32.308,4.956,91.303)
O2': (31.884,9.238,89.424)
C6: (31.753,2.548,88.800)
C5: (31.988,3.620,89.680)
C4: (32.224,4.861,89.117)
P: (34.334,6.282,94.868)
C4': (33.044,8.477,91.988)
C2': (31.588,8.084,90.184)
C2: (32.011,4.065,87.072)
N1: (31.775,2.806,87.474)
N3: (32.244,5.157,87.805)
N6: (31.512,1.301,89.204)
N7: (32.040,3.694,91.063)
N9: (32.444,5.714,90.173)
O5': (33.364,6.859,93.746)
O3': (30.969,9.681,91.886)
C4: (35.330,1.829,88.759)
N3: (35.657,3.136,88.436)
OP1: (37.236,0.408,93.008)
OP2: (36.411,0.178,95.438)
C2: (36.284,4.051,89.244)
C1': (37.334,4.509,91.369)
C3': (36.019,5.101,93.242)
O5': (35.988,2.280,94.109)
O4': (37.810,3.771,92.483)
C5': (36.975,3.159,94.653)
P: (36.217,0.697,94.050)
C4': (37.238,4.304,93.699)
C2': (36.471,5.656,91.894)
O2': (37.234,6.842,91.964)
N1: (36.615,3.588,90.484)
O4: (34.765,1.114,87.924)
O2: (36.526,5.192,88.890)
C6: (36.304,2.310,90.878)
C5: (35.693,1.437,90.081)
O3': (35.758,6.176,94.145)
Image (generated by PyMOL):
PyMOL image
show in jmol