ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A286:A285

Extra

PDB:
ATOM 1 O3' U A 285 -60.927 8.111 -48.306 1.00 19.51 O
ATOM 2 P A A 286 -60.578 7.624 -49.790 1.00 22.25 P
ATOM 3 OP1 A A 286 -61.865 7.495 -50.528 1.00 22.25 O
ATOM 4 OP2 A A 286 -59.696 6.448 -49.663 1.00 22.25 O
ATOM 5 O5' A A 286 -59.751 8.833 -50.379 1.00 22.25 O
ATOM 6 C5' A A 286 -60.398 9.934 -50.982 1.00 22.25 C
ATOM 7 C4' A A 286 -59.392 10.871 -51.580 1.00 22.25 C
ATOM 8 O4' A A 286 -58.428 11.275 -50.573 1.00 22.25 O
ATOM 9 C3' A A 286 -58.550 10.285 -52.684 1.00 22.25 C
ATOM 10 O3' A A 286 -59.215 10.314 -53.913 1.00 22.25 O
ATOM 11 C2' A A 286 -57.310 11.150 -52.654 1.00 22.25 C
ATOM 12 O2' A A 286 -57.550 12.389 -53.312 1.00 22.25 O
ATOM 13 C1' A A 286 -57.155 11.401 -51.156 1.00 22.25 C
ATOM 14 N9 A A 286 -56.285 10.415 -50.529 1.00 22.09 N
ATOM 15 C8 A A 286 -56.722 9.351 -49.803 1.00 22.09 C
ATOM 16 N7 A A 286 -55.755 8.615 -49.331 1.00 22.09 N
ATOM 17 C5 A A 286 -54.611 9.246 -49.784 1.00 22.09 C
ATOM 18 C6 A A 286 -53.257 8.932 -49.617 1.00 22.09 C
ATOM 19 N6 A A 286 -52.867 7.864 -48.921 1.00 22.09 N
ATOM 20 N1 A A 286 -52.342 9.755 -50.187 1.00 22.09 N
ATOM 21 C2 A A 286 -52.797 10.817 -50.870 1.00 22.09 C
ATOM 22 N3 A A 286 -54.049 11.212 -51.106 1.00 22.09 N
ATOM 23 C4 A A 286 -54.920 10.371 -50.527 1.00 22.09 C
ATOM 24 P G A 287 -59.332 8.989 -54.779 1.00 15.54 P
ATOM 25 OP1 G A 287 -60.544 9.129 -55.626 1.00 15.54 O
ATOM 26 OP2 G A 287 -59.247 7.855 -53.849 1.00 15.54 O
ATOM 27 O5' G A 287 -58.019 9.056 -55.681 1.00 15.54 O
TER

ATOM 1 O3' C B 284 -59.314 5.147 -42.790 1.00 22.09 O
ATOM 2 P U B 285 -59.375 4.862 -44.376 1.00 19.51 P
ATOM 3 OP1 U B 285 -60.675 4.203 -44.657 1.00 19.51 O
ATOM 4 OP2 U B 285 -58.120 4.152 -44.749 1.00 19.51 O
ATOM 5 O5' U B 285 -59.378 6.325 -44.996 1.00 19.51 O
ATOM 6 C5' U B 285 -60.603 6.953 -45.341 1.00 19.51 C
ATOM 7 C4' U B 285 -60.394 8.317 -45.945 1.00 19.51 C
ATOM 8 O4' U B 285 -59.387 9.046 -45.201 1.00 19.51 O
ATOM 9 C3' U B 285 -59.893 8.341 -47.372 1.00 19.51 C
ATOM 10 O3' U B 285 -60.927 8.111 -48.306 1.00 19.51 O
ATOM 11 C2' U B 285 -59.256 9.725 -47.470 1.00 19.51 C
ATOM 12 O2' U B 285 -60.236 10.732 -47.671 1.00 19.51 O
ATOM 13 C1' U B 285 -58.675 9.891 -46.067 1.00 19.51 C
ATOM 14 N1 U B 285 -57.274 9.515 -46.010 1.00 19.69 N
ATOM 15 C2 U B 285 -56.385 10.540 -46.147 1.00 19.69 C
ATOM 16 O2 U B 285 -56.743 11.685 -46.317 1.00 19.69 O
ATOM 17 N3 U B 285 -55.073 10.178 -46.095 1.00 19.69 N
ATOM 18 C4 U B 285 -54.585 8.905 -45.918 1.00 19.69 C
ATOM 19 O4 U B 285 -53.356 8.748 -45.886 1.00 19.69 O
ATOM 20 C5 U B 285 -55.589 7.890 -45.778 1.00 19.69 C
ATOM 21 C6 U B 285 -56.874 8.227 -45.820 1.00 19.69 C
ATOM 22 P A B 286 -60.578 7.624 -49.790 1.00 22.25 P
ATOM 23 OP1 A B 286 -61.865 7.495 -50.528 1.00 22.25 O
ATOM 24 OP2 A B 286 -59.696 6.448 -49.663 1.00 22.25 O
ATOM 25 O5' A B 286 -59.751 8.833 -50.379 1.00 22.25 O
TER

Atoms:
OP1: (-61.865,7.495,-50.528)
OP2: (-59.696,6.448,-49.663)
C3': (-58.550,10.285,-52.684)
C1': (-57.155,11.401,-51.156)
C5': (-60.398,9.934,-50.982)
O4': (-58.428,11.275,-50.573)
C8: (-56.722,9.351,-49.803)
O2': (-57.550,12.389,-53.312)
C6: (-53.257,8.932,-49.617)
C5: (-54.611,9.246,-49.784)
C4: (-54.920,10.371,-50.527)
P: (-60.578,7.624,-49.790)
C4': (-59.392,10.871,-51.580)
C2': (-57.310,11.150,-52.654)
C2: (-52.797,10.817,-50.870)
N1: (-52.342,9.755,-50.187)
N3: (-54.049,11.212,-51.106)
N6: (-52.867,7.864,-48.921)
N7: (-55.755,8.615,-49.331)
N9: (-56.285,10.415,-50.529)
O5': (-59.751,8.833,-50.379)
O3': (-59.215,10.314,-53.913)
C4: (-54.585,8.905,-45.918)
N3: (-55.073,10.178,-46.095)
OP1: (-60.675,4.203,-44.657)
OP2: (-58.120,4.152,-44.749)
C2: (-56.385,10.540,-46.147)
C1': (-58.675,9.891,-46.067)
C3': (-59.893,8.341,-47.372)
O5': (-59.378,6.325,-44.996)
O4': (-59.387,9.046,-45.201)
C5': (-60.603,6.953,-45.341)
P: (-59.375,4.862,-44.376)
C4': (-60.394,8.317,-45.945)
C2': (-59.256,9.725,-47.470)
O2': (-60.236,10.732,-47.671)
N1: (-57.274,9.515,-46.010)
O4: (-53.356,8.748,-45.886)
O2: (-56.743,11.685,-46.317)
C6: (-56.874,8.227,-45.820)
C5: (-55.589,7.890,-45.778)
O3': (-60.927,8.111,-48.306)
Image (generated by PyMOL):
PyMOL image
show in jmol