Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1G:V5:V4
Extra
PDB:
ATOM 1 O3' U A 4 -108.263 20.360 -17.717 1.00100.13 O
ATOM 2 P A A 5 -108.140 21.535 -18.790 1.00118.97 P
ATOM 3 OP1 A A 5 -106.733 21.581 -19.255 1.00 98.55 O
ATOM 4 OP2 A A 5 -108.772 22.745 -18.209 1.00106.40 O
ATOM 5 O5' A A 5 -109.055 20.994 -19.986 1.00105.13 O
ATOM 6 C5' A A 5 -108.551 19.961 -20.821 1.00 97.64 C
ATOM 7 C4' A A 5 -109.649 19.324 -21.654 1.00100.33 C
ATOM 8 O4' A A 5 -110.599 18.643 -20.800 1.00106.07 O
ATOM 9 C3' A A 5 -110.510 20.296 -22.440 1.00101.88 C
ATOM 10 O3' A A 5 -109.818 20.729 -23.601 1.00107.91 O
ATOM 11 C2' A A 5 -111.718 19.411 -22.736 1.00 93.05 C
ATOM 12 O2' A A 5 -111.507 18.476 -23.770 1.00 85.03 O
ATOM 13 C1' A A 5 -111.878 18.715 -21.391 1.00 99.88 C
ATOM 14 N9 A A 5 -112.683 19.583 -20.574 1.00 99.44 N
ATOM 15 C8 A A 5 -112.270 20.669 -19.854 1.00 99.14 C
ATOM 16 N7 A A 5 -113.245 21.285 -19.234 1.00101.72 N
ATOM 17 C5 A A 5 -114.362 20.547 -19.590 1.00104.41 C
ATOM 18 C6 A A 5 -115.716 20.685 -19.259 1.00 98.60 C
ATOM 19 N6 A A 5 -116.166 21.657 -18.460 1.00 96.24 N
ATOM 20 N1 A A 5 -116.574 19.781 -19.783 1.00 93.06 N
ATOM 21 C2 A A 5 -116.096 18.810 -20.582 1.00 99.56 C
ATOM 22 N3 A A 5 -114.842 18.576 -20.967 1.00 93.61 N
ATOM 23 C4 A A 5 -114.032 19.495 -20.424 1.00 99.60 C
ATOM 24 P A A 6 -109.428 22.266 -23.784 1.00115.18 P
ATOM 25 OP1 A A 6 -108.491 22.341 -24.916 1.00106.93 O
ATOM 26 OP2 A A 6 -109.051 22.848 -22.478 1.00106.15 O
ATOM 27 O5' A A 6 -110.816 22.915 -24.230 1.00107.68 O
TER
ATOM 1 O3' G B 3 -111.602 21.907 -12.810 1.00 76.72 O
ATOM 2 P U B 4 -111.155 22.901 -13.968 1.00112.13 P
ATOM 3 OP1 U B 4 -109.983 23.695 -13.501 1.00106.29 O
ATOM 4 OP2 U B 4 -112.377 23.563 -14.477 1.00113.98 O
ATOM 5 O5' U B 4 -110.638 21.871 -15.065 1.00101.83 O
ATOM 6 C5' U B 4 -109.393 21.245 -14.856 1.00104.18 C
ATOM 7 C4' U B 4 -109.331 19.942 -15.628 1.00106.07 C
ATOM 8 O4' U B 4 -110.412 19.082 -15.210 1.00 96.92 O
ATOM 9 C3' U B 4 -109.513 20.062 -17.130 1.00 93.41 C
ATOM 10 O3' U B 4 -108.263 20.360 -17.717 1.00100.13 O
ATOM 11 C2' U B 4 -109.921 18.646 -17.493 1.00 94.26 C
ATOM 12 O2' U B 4 -108.786 17.826 -17.687 1.00 92.07 O
ATOM 13 C1' U B 4 -110.681 18.181 -16.254 1.00100.59 C
ATOM 14 N1 U B 4 -112.133 18.209 -16.409 1.00111.39 N
ATOM 15 C2 U B 4 -112.725 17.336 -17.286 1.00108.02 C
ATOM 16 O2 U B 4 -112.097 16.538 -17.951 1.00113.45 O
ATOM 17 N3 U B 4 -114.087 17.436 -17.358 1.00100.79 N
ATOM 18 C4 U B 4 -114.890 18.306 -16.644 1.00101.39 C
ATOM 19 O4 U B 4 -116.105 18.279 -16.811 1.00 99.97 O
ATOM 20 C5 U B 4 -114.191 19.188 -15.745 1.00111.66 C
ATOM 21 C6 U B 4 -112.860 19.108 -15.661 1.00109.55 C
ATOM 22 P A B 5 -108.140 21.535 -18.790 1.00118.97 P
ATOM 23 OP1 A B 5 -106.733 21.581 -19.255 1.00 98.55 O
ATOM 24 OP2 A B 5 -108.772 22.745 -18.209 1.00106.40 O
ATOM 25 O5' A B 5 -109.055 20.994 -19.986 1.00105.13 O
TER
ATOM 2 P A A 5 -108.140 21.535 -18.790 1.00118.97 P
ATOM 3 OP1 A A 5 -106.733 21.581 -19.255 1.00 98.55 O
ATOM 4 OP2 A A 5 -108.772 22.745 -18.209 1.00106.40 O
ATOM 5 O5' A A 5 -109.055 20.994 -19.986 1.00105.13 O
ATOM 6 C5' A A 5 -108.551 19.961 -20.821 1.00 97.64 C
ATOM 7 C4' A A 5 -109.649 19.324 -21.654 1.00100.33 C
ATOM 8 O4' A A 5 -110.599 18.643 -20.800 1.00106.07 O
ATOM 9 C3' A A 5 -110.510 20.296 -22.440 1.00101.88 C
ATOM 10 O3' A A 5 -109.818 20.729 -23.601 1.00107.91 O
ATOM 11 C2' A A 5 -111.718 19.411 -22.736 1.00 93.05 C
ATOM 12 O2' A A 5 -111.507 18.476 -23.770 1.00 85.03 O
ATOM 13 C1' A A 5 -111.878 18.715 -21.391 1.00 99.88 C
ATOM 14 N9 A A 5 -112.683 19.583 -20.574 1.00 99.44 N
ATOM 15 C8 A A 5 -112.270 20.669 -19.854 1.00 99.14 C
ATOM 16 N7 A A 5 -113.245 21.285 -19.234 1.00101.72 N
ATOM 17 C5 A A 5 -114.362 20.547 -19.590 1.00104.41 C
ATOM 18 C6 A A 5 -115.716 20.685 -19.259 1.00 98.60 C
ATOM 19 N6 A A 5 -116.166 21.657 -18.460 1.00 96.24 N
ATOM 20 N1 A A 5 -116.574 19.781 -19.783 1.00 93.06 N
ATOM 21 C2 A A 5 -116.096 18.810 -20.582 1.00 99.56 C
ATOM 22 N3 A A 5 -114.842 18.576 -20.967 1.00 93.61 N
ATOM 23 C4 A A 5 -114.032 19.495 -20.424 1.00 99.60 C
ATOM 24 P A A 6 -109.428 22.266 -23.784 1.00115.18 P
ATOM 25 OP1 A A 6 -108.491 22.341 -24.916 1.00106.93 O
ATOM 26 OP2 A A 6 -109.051 22.848 -22.478 1.00106.15 O
ATOM 27 O5' A A 6 -110.816 22.915 -24.230 1.00107.68 O
TER
ATOM 1 O3' G B 3 -111.602 21.907 -12.810 1.00 76.72 O
ATOM 2 P U B 4 -111.155 22.901 -13.968 1.00112.13 P
ATOM 3 OP1 U B 4 -109.983 23.695 -13.501 1.00106.29 O
ATOM 4 OP2 U B 4 -112.377 23.563 -14.477 1.00113.98 O
ATOM 5 O5' U B 4 -110.638 21.871 -15.065 1.00101.83 O
ATOM 6 C5' U B 4 -109.393 21.245 -14.856 1.00104.18 C
ATOM 7 C4' U B 4 -109.331 19.942 -15.628 1.00106.07 C
ATOM 8 O4' U B 4 -110.412 19.082 -15.210 1.00 96.92 O
ATOM 9 C3' U B 4 -109.513 20.062 -17.130 1.00 93.41 C
ATOM 10 O3' U B 4 -108.263 20.360 -17.717 1.00100.13 O
ATOM 11 C2' U B 4 -109.921 18.646 -17.493 1.00 94.26 C
ATOM 12 O2' U B 4 -108.786 17.826 -17.687 1.00 92.07 O
ATOM 13 C1' U B 4 -110.681 18.181 -16.254 1.00100.59 C
ATOM 14 N1 U B 4 -112.133 18.209 -16.409 1.00111.39 N
ATOM 15 C2 U B 4 -112.725 17.336 -17.286 1.00108.02 C
ATOM 16 O2 U B 4 -112.097 16.538 -17.951 1.00113.45 O
ATOM 17 N3 U B 4 -114.087 17.436 -17.358 1.00100.79 N
ATOM 18 C4 U B 4 -114.890 18.306 -16.644 1.00101.39 C
ATOM 19 O4 U B 4 -116.105 18.279 -16.811 1.00 99.97 O
ATOM 20 C5 U B 4 -114.191 19.188 -15.745 1.00111.66 C
ATOM 21 C6 U B 4 -112.860 19.108 -15.661 1.00109.55 C
ATOM 22 P A B 5 -108.140 21.535 -18.790 1.00118.97 P
ATOM 23 OP1 A B 5 -106.733 21.581 -19.255 1.00 98.55 O
ATOM 24 OP2 A B 5 -108.772 22.745 -18.209 1.00106.40 O
ATOM 25 O5' A B 5 -109.055 20.994 -19.986 1.00105.13 O
TER
Atoms:
OP1: (-106.733,21.581,-19.255)
OP2: (-108.772,22.745,-18.209)
C3': (-110.510,20.296,-22.440)
C1': (-111.878,18.715,-21.391)
C5': (-108.551,19.961,-20.821)
O4': (-110.599,18.643,-20.800)
C8: (-112.270,20.669,-19.854)
O2': (-111.507,18.476,-23.770)
C6: (-115.716,20.685,-19.259)
C5: (-114.362,20.547,-19.590)
C4: (-114.032,19.495,-20.424)
P: (-108.140,21.535,-18.790)
C4': (-109.649,19.324,-21.654)
C2': (-111.718,19.411,-22.736)
C2: (-116.096,18.810,-20.582)
N1: (-116.574,19.781,-19.783)
N3: (-114.842,18.576,-20.967)
N6: (-116.166,21.657,-18.460)
N7: (-113.245,21.285,-19.234)
N9: (-112.683,19.583,-20.574)
O5': (-109.055,20.994,-19.986)
O3': (-109.818,20.729,-23.601)
OP2: (-108.772,22.745,-18.209)
C3': (-110.510,20.296,-22.440)
C1': (-111.878,18.715,-21.391)
C5': (-108.551,19.961,-20.821)
O4': (-110.599,18.643,-20.800)
C8: (-112.270,20.669,-19.854)
O2': (-111.507,18.476,-23.770)
C6: (-115.716,20.685,-19.259)
C5: (-114.362,20.547,-19.590)
C4: (-114.032,19.495,-20.424)
P: (-108.140,21.535,-18.790)
C4': (-109.649,19.324,-21.654)
C2': (-111.718,19.411,-22.736)
C2: (-116.096,18.810,-20.582)
N1: (-116.574,19.781,-19.783)
N3: (-114.842,18.576,-20.967)
N6: (-116.166,21.657,-18.460)
N7: (-113.245,21.285,-19.234)
N9: (-112.683,19.583,-20.574)
O5': (-109.055,20.994,-19.986)
O3': (-109.818,20.729,-23.601)
C4: (-114.890,18.306,-16.644)
N3: (-114.087,17.436,-17.358)
OP1: (-109.983,23.695,-13.501)
OP2: (-112.377,23.563,-14.477)
C2: (-112.725,17.336,-17.286)
C1': (-110.681,18.181,-16.254)
C3': (-109.513,20.062,-17.130)
O5': (-110.638,21.871,-15.065)
O4': (-110.412,19.082,-15.210)
C5': (-109.393,21.245,-14.856)
P: (-111.155,22.901,-13.968)
C4': (-109.331,19.942,-15.628)
C2': (-109.921,18.646,-17.493)
O2': (-108.786,17.826,-17.687)
N1: (-112.133,18.209,-16.409)
O4: (-116.105,18.279,-16.811)
O2: (-112.097,16.538,-17.951)
C6: (-112.860,19.108,-15.661)
C5: (-114.191,19.188,-15.745)
O3': (-108.263,20.360,-17.717)
N3: (-114.087,17.436,-17.358)
OP1: (-109.983,23.695,-13.501)
OP2: (-112.377,23.563,-14.477)
C2: (-112.725,17.336,-17.286)
C1': (-110.681,18.181,-16.254)
C3': (-109.513,20.062,-17.130)
O5': (-110.638,21.871,-15.065)
O4': (-110.412,19.082,-15.210)
C5': (-109.393,21.245,-14.856)
P: (-111.155,22.901,-13.968)
C4': (-109.331,19.942,-15.628)
C2': (-109.921,18.646,-17.493)
O2': (-108.786,17.826,-17.687)
N1: (-112.133,18.209,-16.409)
O4: (-116.105,18.279,-16.811)
O2: (-112.097,16.538,-17.951)
C6: (-112.860,19.108,-15.661)
C5: (-114.191,19.188,-15.745)
O3': (-108.263,20.360,-17.717)
Image (generated by PyMOL):