Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2527:A2526
Extra
PDB:
ATOM 1 O3' U A2526 -87.124 -49.809 -55.025 1.00 13.57 O
ATOM 2 P A A2527 -87.207 -50.716 -53.700 1.00 9.67 P
ATOM 3 OP1 A A2527 -85.809 -50.985 -53.270 1.00 9.67 O
ATOM 4 OP2 A A2527 -88.073 -51.852 -54.019 1.00 9.67 O
ATOM 5 O5' A A2527 -87.936 -49.754 -52.646 1.00 9.67 O
ATOM 6 C5' A A2527 -87.328 -48.530 -52.262 1.00 9.67 C
ATOM 7 C4' A A2527 -88.178 -47.719 -51.293 1.00 9.67 C
ATOM 8 O4' A A2527 -89.331 -47.133 -51.974 1.00 9.67 O
ATOM 9 C3' A A2527 -88.789 -48.456 -50.111 1.00 9.67 C
ATOM 10 O3' A A2527 -87.880 -48.666 -49.060 1.00 9.67 O
ATOM 11 C2' A A2527 -89.928 -47.529 -49.731 1.00 9.67 C
ATOM 12 O2' A A2527 -89.428 -46.363 -49.085 1.00 9.67 O
ATOM 13 C1' A A2527 -90.448 -47.149 -51.109 1.00 9.67 C
ATOM 14 N9 A A2527 -91.354 -48.174 -51.605 1.00 9.35 N
ATOM 15 C8 A A2527 -90.862 -49.280 -52.244 1.00 9.35 C
ATOM 16 N7 A A2527 -91.790 -50.101 -52.608 1.00 9.35 N
ATOM 17 C5 A A2527 -92.957 -49.490 -52.157 1.00 9.35 C
ATOM 18 C6 A A2527 -94.277 -49.916 -52.234 1.00 9.35 C
ATOM 19 N6 A A2527 -94.556 -51.084 -52.825 1.00 9.35 N
ATOM 20 N1 A A2527 -95.232 -49.112 -51.694 1.00 9.35 N
ATOM 21 C2 A A2527 -94.851 -47.969 -51.123 1.00 9.35 C
ATOM 22 N3 A A2527 -93.622 -47.464 -50.982 1.00 9.35 N
ATOM 23 C4 A A2527 -92.713 -48.290 -51.523 1.00 9.35 C
ATOM 24 P G A2528 -88.347 -49.485 -47.771 1.00 0.01 P
ATOM 25 OP1 G A2528 -87.409 -49.130 -46.655 1.00 0.01 O
ATOM 26 OP2 G A2528 -88.480 -50.920 -48.189 1.00 0.01 O
ATOM 27 O5' G A2528 -89.779 -48.871 -47.468 1.00 0.01 O
TER
ATOM 1 O3' G B2525 -91.275 -51.928 -58.991 1.00 0.13 O
ATOM 2 P U B2526 -90.712 -52.438 -57.577 1.00 13.57 P
ATOM 3 OP1 U B2526 -89.734 -53.496 -57.858 1.00 13.57 O
ATOM 4 OP2 U B2526 -91.881 -52.766 -56.738 1.00 13.57 O
ATOM 5 O5' U B2526 -89.963 -51.160 -57.006 1.00 13.57 O
ATOM 6 C5' U B2526 -88.780 -50.689 -57.623 1.00 13.57 C
ATOM 7 C4' U B2526 -88.377 -49.354 -57.078 1.00 13.57 C
ATOM 8 O4' U B2526 -89.368 -48.365 -57.435 1.00 13.57 O
ATOM 9 C3' U B2526 -88.306 -49.257 -55.571 1.00 13.57 C
ATOM 10 O3' U B2526 -87.124 -49.809 -55.025 1.00 13.57 O
ATOM 11 C2' U B2526 -88.451 -47.766 -55.334 1.00 13.57 C
ATOM 12 O2' U B2526 -87.231 -47.087 -55.594 1.00 13.57 O
ATOM 13 C1' U B2526 -89.460 -47.395 -56.415 1.00 13.57 C
ATOM 14 N1 U B2526 -90.840 -47.387 -55.888 1.00 13.21 N
ATOM 15 C2 U B2526 -91.267 -46.230 -55.236 1.00 13.21 C
ATOM 16 O2 U B2526 -90.603 -45.222 -55.075 1.00 13.21 O
ATOM 17 N3 U B2526 -92.538 -46.272 -54.761 1.00 13.21 N
ATOM 18 C4 U B2526 -93.415 -47.314 -54.858 1.00 13.21 C
ATOM 19 O4 U B2526 -94.517 -47.128 -54.348 1.00 13.21 O
ATOM 20 C5 U B2526 -92.925 -48.480 -55.542 1.00 13.21 C
ATOM 21 C6 U B2526 -91.673 -48.477 -56.022 1.00 13.21 C
ATOM 22 P A B2527 -87.207 -50.716 -53.700 1.00 9.67 P
ATOM 23 OP1 A B2527 -85.809 -50.985 -53.270 1.00 9.67 O
ATOM 24 OP2 A B2527 -88.073 -51.852 -54.019 1.00 9.67 O
ATOM 25 O5' A B2527 -87.936 -49.754 -52.646 1.00 9.67 O
TER
ATOM 2 P A A2527 -87.207 -50.716 -53.700 1.00 9.67 P
ATOM 3 OP1 A A2527 -85.809 -50.985 -53.270 1.00 9.67 O
ATOM 4 OP2 A A2527 -88.073 -51.852 -54.019 1.00 9.67 O
ATOM 5 O5' A A2527 -87.936 -49.754 -52.646 1.00 9.67 O
ATOM 6 C5' A A2527 -87.328 -48.530 -52.262 1.00 9.67 C
ATOM 7 C4' A A2527 -88.178 -47.719 -51.293 1.00 9.67 C
ATOM 8 O4' A A2527 -89.331 -47.133 -51.974 1.00 9.67 O
ATOM 9 C3' A A2527 -88.789 -48.456 -50.111 1.00 9.67 C
ATOM 10 O3' A A2527 -87.880 -48.666 -49.060 1.00 9.67 O
ATOM 11 C2' A A2527 -89.928 -47.529 -49.731 1.00 9.67 C
ATOM 12 O2' A A2527 -89.428 -46.363 -49.085 1.00 9.67 O
ATOM 13 C1' A A2527 -90.448 -47.149 -51.109 1.00 9.67 C
ATOM 14 N9 A A2527 -91.354 -48.174 -51.605 1.00 9.35 N
ATOM 15 C8 A A2527 -90.862 -49.280 -52.244 1.00 9.35 C
ATOM 16 N7 A A2527 -91.790 -50.101 -52.608 1.00 9.35 N
ATOM 17 C5 A A2527 -92.957 -49.490 -52.157 1.00 9.35 C
ATOM 18 C6 A A2527 -94.277 -49.916 -52.234 1.00 9.35 C
ATOM 19 N6 A A2527 -94.556 -51.084 -52.825 1.00 9.35 N
ATOM 20 N1 A A2527 -95.232 -49.112 -51.694 1.00 9.35 N
ATOM 21 C2 A A2527 -94.851 -47.969 -51.123 1.00 9.35 C
ATOM 22 N3 A A2527 -93.622 -47.464 -50.982 1.00 9.35 N
ATOM 23 C4 A A2527 -92.713 -48.290 -51.523 1.00 9.35 C
ATOM 24 P G A2528 -88.347 -49.485 -47.771 1.00 0.01 P
ATOM 25 OP1 G A2528 -87.409 -49.130 -46.655 1.00 0.01 O
ATOM 26 OP2 G A2528 -88.480 -50.920 -48.189 1.00 0.01 O
ATOM 27 O5' G A2528 -89.779 -48.871 -47.468 1.00 0.01 O
TER
ATOM 1 O3' G B2525 -91.275 -51.928 -58.991 1.00 0.13 O
ATOM 2 P U B2526 -90.712 -52.438 -57.577 1.00 13.57 P
ATOM 3 OP1 U B2526 -89.734 -53.496 -57.858 1.00 13.57 O
ATOM 4 OP2 U B2526 -91.881 -52.766 -56.738 1.00 13.57 O
ATOM 5 O5' U B2526 -89.963 -51.160 -57.006 1.00 13.57 O
ATOM 6 C5' U B2526 -88.780 -50.689 -57.623 1.00 13.57 C
ATOM 7 C4' U B2526 -88.377 -49.354 -57.078 1.00 13.57 C
ATOM 8 O4' U B2526 -89.368 -48.365 -57.435 1.00 13.57 O
ATOM 9 C3' U B2526 -88.306 -49.257 -55.571 1.00 13.57 C
ATOM 10 O3' U B2526 -87.124 -49.809 -55.025 1.00 13.57 O
ATOM 11 C2' U B2526 -88.451 -47.766 -55.334 1.00 13.57 C
ATOM 12 O2' U B2526 -87.231 -47.087 -55.594 1.00 13.57 O
ATOM 13 C1' U B2526 -89.460 -47.395 -56.415 1.00 13.57 C
ATOM 14 N1 U B2526 -90.840 -47.387 -55.888 1.00 13.21 N
ATOM 15 C2 U B2526 -91.267 -46.230 -55.236 1.00 13.21 C
ATOM 16 O2 U B2526 -90.603 -45.222 -55.075 1.00 13.21 O
ATOM 17 N3 U B2526 -92.538 -46.272 -54.761 1.00 13.21 N
ATOM 18 C4 U B2526 -93.415 -47.314 -54.858 1.00 13.21 C
ATOM 19 O4 U B2526 -94.517 -47.128 -54.348 1.00 13.21 O
ATOM 20 C5 U B2526 -92.925 -48.480 -55.542 1.00 13.21 C
ATOM 21 C6 U B2526 -91.673 -48.477 -56.022 1.00 13.21 C
ATOM 22 P A B2527 -87.207 -50.716 -53.700 1.00 9.67 P
ATOM 23 OP1 A B2527 -85.809 -50.985 -53.270 1.00 9.67 O
ATOM 24 OP2 A B2527 -88.073 -51.852 -54.019 1.00 9.67 O
ATOM 25 O5' A B2527 -87.936 -49.754 -52.646 1.00 9.67 O
TER
Atoms:
OP1: (-85.809,-50.985,-53.270)
OP2: (-88.073,-51.852,-54.019)
C3': (-88.789,-48.456,-50.111)
C1': (-90.448,-47.149,-51.109)
C5': (-87.328,-48.530,-52.262)
O4': (-89.331,-47.133,-51.974)
C8: (-90.862,-49.280,-52.244)
O2': (-89.428,-46.363,-49.085)
C6: (-94.277,-49.916,-52.234)
C5: (-92.957,-49.490,-52.157)
C4: (-92.713,-48.290,-51.523)
P: (-87.207,-50.716,-53.700)
C4': (-88.178,-47.719,-51.293)
C2': (-89.928,-47.529,-49.731)
C2: (-94.851,-47.969,-51.123)
N1: (-95.232,-49.112,-51.694)
N3: (-93.622,-47.464,-50.982)
N6: (-94.556,-51.084,-52.825)
N7: (-91.790,-50.101,-52.608)
N9: (-91.354,-48.174,-51.605)
O5': (-87.936,-49.754,-52.646)
O3': (-87.880,-48.666,-49.060)
OP2: (-88.073,-51.852,-54.019)
C3': (-88.789,-48.456,-50.111)
C1': (-90.448,-47.149,-51.109)
C5': (-87.328,-48.530,-52.262)
O4': (-89.331,-47.133,-51.974)
C8: (-90.862,-49.280,-52.244)
O2': (-89.428,-46.363,-49.085)
C6: (-94.277,-49.916,-52.234)
C5: (-92.957,-49.490,-52.157)
C4: (-92.713,-48.290,-51.523)
P: (-87.207,-50.716,-53.700)
C4': (-88.178,-47.719,-51.293)
C2': (-89.928,-47.529,-49.731)
C2: (-94.851,-47.969,-51.123)
N1: (-95.232,-49.112,-51.694)
N3: (-93.622,-47.464,-50.982)
N6: (-94.556,-51.084,-52.825)
N7: (-91.790,-50.101,-52.608)
N9: (-91.354,-48.174,-51.605)
O5': (-87.936,-49.754,-52.646)
O3': (-87.880,-48.666,-49.060)
C4: (-93.415,-47.314,-54.858)
N3: (-92.538,-46.272,-54.761)
OP1: (-89.734,-53.496,-57.858)
OP2: (-91.881,-52.766,-56.738)
C2: (-91.267,-46.230,-55.236)
C1': (-89.460,-47.395,-56.415)
C3': (-88.306,-49.257,-55.571)
O5': (-89.963,-51.160,-57.006)
O4': (-89.368,-48.365,-57.435)
C5': (-88.780,-50.689,-57.623)
P: (-90.712,-52.438,-57.577)
C4': (-88.377,-49.354,-57.078)
C2': (-88.451,-47.766,-55.334)
O2': (-87.231,-47.087,-55.594)
N1: (-90.840,-47.387,-55.888)
O4: (-94.517,-47.128,-54.348)
O2: (-90.603,-45.222,-55.075)
C6: (-91.673,-48.477,-56.022)
C5: (-92.925,-48.480,-55.542)
O3': (-87.124,-49.809,-55.025)
N3: (-92.538,-46.272,-54.761)
OP1: (-89.734,-53.496,-57.858)
OP2: (-91.881,-52.766,-56.738)
C2: (-91.267,-46.230,-55.236)
C1': (-89.460,-47.395,-56.415)
C3': (-88.306,-49.257,-55.571)
O5': (-89.963,-51.160,-57.006)
O4': (-89.368,-48.365,-57.435)
C5': (-88.780,-50.689,-57.623)
P: (-90.712,-52.438,-57.577)
C4': (-88.377,-49.354,-57.078)
C2': (-88.451,-47.766,-55.334)
O2': (-87.231,-47.087,-55.594)
N1: (-90.840,-47.387,-55.888)
O4: (-94.517,-47.128,-54.348)
O2: (-90.603,-45.222,-55.075)
C6: (-91.673,-48.477,-56.022)
C5: (-92.925,-48.480,-55.542)
O3': (-87.124,-49.809,-55.025)
Image (generated by PyMOL):