Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A222:A221
Extra
PDB:
ATOM 1 O3' U A 221 50.103 107.592 21.256 1.00 49.76 O
ATOM 2 P A A 222 49.971 107.799 19.685 1.00 51.84 P
ATOM 3 OP1 A A 222 48.958 108.869 19.538 1.00 50.45 O
ATOM 4 OP2 A A 222 49.756 106.472 19.047 1.00 51.19 O
ATOM 5 O5' A A 222 51.412 108.315 19.247 1.00 52.23 O
ATOM 6 C5' A A 222 51.905 109.592 19.672 1.00 51.96 C
ATOM 7 C4' A A 222 53.374 109.656 19.432 1.00 51.73 C
ATOM 8 O4' A A 222 53.990 108.544 20.133 1.00 52.43 O
ATOM 9 C3' A A 222 53.744 109.398 17.992 1.00 52.62 C
ATOM 10 O3' A A 222 53.662 110.561 17.198 1.00 55.49 O
ATOM 11 C2' A A 222 55.161 108.860 18.088 1.00 52.09 C
ATOM 12 O2' A A 222 56.145 109.863 18.181 1.00 54.01 O
ATOM 13 C1' A A 222 55.084 108.047 19.377 1.00 51.03 C
ATOM 14 N9 A A 222 54.856 106.636 19.098 1.00 49.14 N
ATOM 15 C8 A A 222 53.661 105.979 18.899 1.00 47.97 C
ATOM 16 N7 A A 222 53.801 104.692 18.694 1.00 48.90 N
ATOM 17 C5 A A 222 55.178 104.489 18.760 1.00 48.37 C
ATOM 18 C6 A A 222 55.973 103.336 18.654 1.00 49.23 C
ATOM 19 N6 A A 222 55.470 102.112 18.471 1.00 50.65 N
ATOM 20 N1 A A 222 57.315 103.482 18.755 1.00 48.32 N
ATOM 21 C2 A A 222 57.810 104.704 18.957 1.00 47.74 C
ATOM 22 N3 A A 222 57.169 105.861 19.091 1.00 47.20 N
ATOM 23 C4 A A 222 55.838 105.682 18.987 1.00 48.70 C
ATOM 24 P C A 223 53.846 110.433 15.610 1.00 57.83 P
ATOM 25 OP1 C A 223 53.707 111.778 14.998 1.00 55.82 O
ATOM 26 OP2 C A 223 52.953 109.332 15.177 1.00 58.39 O
ATOM 27 O5' C A 223 55.353 109.932 15.464 1.00 56.73 O
TER
ATOM 1 O3' A B 220 48.659 101.837 22.270 1.00 48.50 O
ATOM 2 P U B 221 48.934 102.646 20.910 1.00 47.61 P
ATOM 3 OP1 U B 221 47.584 103.040 20.421 1.00 46.32 O
ATOM 4 OP2 U B 221 49.861 101.882 20.017 1.00 45.73 O
ATOM 5 O5' U B 221 49.727 103.936 21.403 1.00 46.98 O
ATOM 6 C5' U B 221 49.140 104.827 22.363 1.00 46.29 C
ATOM 7 C4' U B 221 50.163 105.833 22.845 1.00 46.90 C
ATOM 8 O4' U B 221 51.220 105.205 23.611 1.00 47.23 O
ATOM 9 C3' U B 221 50.905 106.548 21.743 1.00 46.99 C
ATOM 10 O3' U B 221 50.103 107.592 21.256 1.00 49.76 O
ATOM 11 C2' U B 221 52.130 107.083 22.455 1.00 46.12 C
ATOM 12 O2' U B 221 51.813 108.280 23.152 1.00 44.52 O
ATOM 13 C1' U B 221 52.429 105.926 23.418 1.00 45.68 C
ATOM 14 N1 U B 221 53.454 104.980 22.951 1.00 44.72 N
ATOM 15 C2 U B 221 54.783 105.241 23.265 1.00 45.71 C
ATOM 16 O2 U B 221 55.151 106.258 23.852 1.00 46.39 O
ATOM 17 N3 U B 221 55.671 104.275 22.853 1.00 45.18 N
ATOM 18 C4 U B 221 55.380 103.123 22.156 1.00 45.42 C
ATOM 19 O4 U B 221 56.298 102.378 21.801 1.00 46.03 O
ATOM 20 C5 U B 221 53.996 102.949 21.849 1.00 45.10 C
ATOM 21 C6 U B 221 53.107 103.859 22.242 1.00 44.59 C
ATOM 22 P A B 222 49.971 107.799 19.685 1.00 51.84 P
ATOM 23 OP1 A B 222 48.958 108.869 19.538 1.00 50.45 O
ATOM 24 OP2 A B 222 49.756 106.472 19.047 1.00 51.19 O
ATOM 25 O5' A B 222 51.412 108.315 19.247 1.00 52.23 O
TER
ATOM 2 P A A 222 49.971 107.799 19.685 1.00 51.84 P
ATOM 3 OP1 A A 222 48.958 108.869 19.538 1.00 50.45 O
ATOM 4 OP2 A A 222 49.756 106.472 19.047 1.00 51.19 O
ATOM 5 O5' A A 222 51.412 108.315 19.247 1.00 52.23 O
ATOM 6 C5' A A 222 51.905 109.592 19.672 1.00 51.96 C
ATOM 7 C4' A A 222 53.374 109.656 19.432 1.00 51.73 C
ATOM 8 O4' A A 222 53.990 108.544 20.133 1.00 52.43 O
ATOM 9 C3' A A 222 53.744 109.398 17.992 1.00 52.62 C
ATOM 10 O3' A A 222 53.662 110.561 17.198 1.00 55.49 O
ATOM 11 C2' A A 222 55.161 108.860 18.088 1.00 52.09 C
ATOM 12 O2' A A 222 56.145 109.863 18.181 1.00 54.01 O
ATOM 13 C1' A A 222 55.084 108.047 19.377 1.00 51.03 C
ATOM 14 N9 A A 222 54.856 106.636 19.098 1.00 49.14 N
ATOM 15 C8 A A 222 53.661 105.979 18.899 1.00 47.97 C
ATOM 16 N7 A A 222 53.801 104.692 18.694 1.00 48.90 N
ATOM 17 C5 A A 222 55.178 104.489 18.760 1.00 48.37 C
ATOM 18 C6 A A 222 55.973 103.336 18.654 1.00 49.23 C
ATOM 19 N6 A A 222 55.470 102.112 18.471 1.00 50.65 N
ATOM 20 N1 A A 222 57.315 103.482 18.755 1.00 48.32 N
ATOM 21 C2 A A 222 57.810 104.704 18.957 1.00 47.74 C
ATOM 22 N3 A A 222 57.169 105.861 19.091 1.00 47.20 N
ATOM 23 C4 A A 222 55.838 105.682 18.987 1.00 48.70 C
ATOM 24 P C A 223 53.846 110.433 15.610 1.00 57.83 P
ATOM 25 OP1 C A 223 53.707 111.778 14.998 1.00 55.82 O
ATOM 26 OP2 C A 223 52.953 109.332 15.177 1.00 58.39 O
ATOM 27 O5' C A 223 55.353 109.932 15.464 1.00 56.73 O
TER
ATOM 1 O3' A B 220 48.659 101.837 22.270 1.00 48.50 O
ATOM 2 P U B 221 48.934 102.646 20.910 1.00 47.61 P
ATOM 3 OP1 U B 221 47.584 103.040 20.421 1.00 46.32 O
ATOM 4 OP2 U B 221 49.861 101.882 20.017 1.00 45.73 O
ATOM 5 O5' U B 221 49.727 103.936 21.403 1.00 46.98 O
ATOM 6 C5' U B 221 49.140 104.827 22.363 1.00 46.29 C
ATOM 7 C4' U B 221 50.163 105.833 22.845 1.00 46.90 C
ATOM 8 O4' U B 221 51.220 105.205 23.611 1.00 47.23 O
ATOM 9 C3' U B 221 50.905 106.548 21.743 1.00 46.99 C
ATOM 10 O3' U B 221 50.103 107.592 21.256 1.00 49.76 O
ATOM 11 C2' U B 221 52.130 107.083 22.455 1.00 46.12 C
ATOM 12 O2' U B 221 51.813 108.280 23.152 1.00 44.52 O
ATOM 13 C1' U B 221 52.429 105.926 23.418 1.00 45.68 C
ATOM 14 N1 U B 221 53.454 104.980 22.951 1.00 44.72 N
ATOM 15 C2 U B 221 54.783 105.241 23.265 1.00 45.71 C
ATOM 16 O2 U B 221 55.151 106.258 23.852 1.00 46.39 O
ATOM 17 N3 U B 221 55.671 104.275 22.853 1.00 45.18 N
ATOM 18 C4 U B 221 55.380 103.123 22.156 1.00 45.42 C
ATOM 19 O4 U B 221 56.298 102.378 21.801 1.00 46.03 O
ATOM 20 C5 U B 221 53.996 102.949 21.849 1.00 45.10 C
ATOM 21 C6 U B 221 53.107 103.859 22.242 1.00 44.59 C
ATOM 22 P A B 222 49.971 107.799 19.685 1.00 51.84 P
ATOM 23 OP1 A B 222 48.958 108.869 19.538 1.00 50.45 O
ATOM 24 OP2 A B 222 49.756 106.472 19.047 1.00 51.19 O
ATOM 25 O5' A B 222 51.412 108.315 19.247 1.00 52.23 O
TER
Atoms:
OP1: (48.958,108.869,19.538)
OP2: (49.756,106.472,19.047)
C3': (53.744,109.398,17.992)
C1': (55.084,108.047,19.377)
C5': (51.905,109.592,19.672)
O4': (53.990,108.544,20.133)
C8: (53.661,105.979,18.899)
O2': (56.145,109.863,18.181)
C6: (55.973,103.336,18.654)
C5: (55.178,104.489,18.760)
C4: (55.838,105.682,18.987)
P: (49.971,107.799,19.685)
C4': (53.374,109.656,19.432)
C2': (55.161,108.860,18.088)
C2: (57.810,104.704,18.957)
N1: (57.315,103.482,18.755)
N3: (57.169,105.861,19.091)
N6: (55.470,102.112,18.471)
N7: (53.801,104.692,18.694)
N9: (54.856,106.636,19.098)
O5': (51.412,108.315,19.247)
O3': (53.662,110.561,17.198)
OP2: (49.756,106.472,19.047)
C3': (53.744,109.398,17.992)
C1': (55.084,108.047,19.377)
C5': (51.905,109.592,19.672)
O4': (53.990,108.544,20.133)
C8: (53.661,105.979,18.899)
O2': (56.145,109.863,18.181)
C6: (55.973,103.336,18.654)
C5: (55.178,104.489,18.760)
C4: (55.838,105.682,18.987)
P: (49.971,107.799,19.685)
C4': (53.374,109.656,19.432)
C2': (55.161,108.860,18.088)
C2: (57.810,104.704,18.957)
N1: (57.315,103.482,18.755)
N3: (57.169,105.861,19.091)
N6: (55.470,102.112,18.471)
N7: (53.801,104.692,18.694)
N9: (54.856,106.636,19.098)
O5': (51.412,108.315,19.247)
O3': (53.662,110.561,17.198)
C4: (55.380,103.123,22.156)
N3: (55.671,104.275,22.853)
OP1: (47.584,103.040,20.421)
OP2: (49.861,101.882,20.017)
C2: (54.783,105.241,23.265)
C1': (52.429,105.926,23.418)
C3': (50.905,106.548,21.743)
O5': (49.727,103.936,21.403)
O4': (51.220,105.205,23.611)
C5': (49.140,104.827,22.363)
P: (48.934,102.646,20.910)
C4': (50.163,105.833,22.845)
C2': (52.130,107.083,22.455)
O2': (51.813,108.280,23.152)
N1: (53.454,104.980,22.951)
O4: (56.298,102.378,21.801)
O2: (55.151,106.258,23.852)
C6: (53.107,103.859,22.242)
C5: (53.996,102.949,21.849)
O3': (50.103,107.592,21.256)
N3: (55.671,104.275,22.853)
OP1: (47.584,103.040,20.421)
OP2: (49.861,101.882,20.017)
C2: (54.783,105.241,23.265)
C1': (52.429,105.926,23.418)
C3': (50.905,106.548,21.743)
O5': (49.727,103.936,21.403)
O4': (51.220,105.205,23.611)
C5': (49.140,104.827,22.363)
P: (48.934,102.646,20.910)
C4': (50.163,105.833,22.845)
C2': (52.130,107.083,22.455)
O2': (51.813,108.280,23.152)
N1: (53.454,104.980,22.951)
O4: (56.298,102.378,21.801)
O2: (55.151,106.258,23.852)
C6: (53.107,103.859,22.242)
C5: (53.996,102.949,21.849)
O3': (50.103,107.592,21.256)
Image (generated by PyMOL):