Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0222:0221
Extra
PDB:
ATOM 1 O3' U A 221 49.919 107.623 20.849 1.00 45.76 O
ATOM 2 P A A 222 49.736 107.776 19.262 1.00 47.52 P
ATOM 3 OP1 A A 222 48.777 108.899 19.095 1.00 44.16 O
ATOM 4 OP2 A A 222 49.437 106.445 18.660 1.00 43.94 O
ATOM 5 O5' A A 222 51.177 108.235 18.759 1.00 46.23 O
ATOM 6 C5' A A 222 51.714 109.512 19.153 1.00 45.48 C
ATOM 7 C4' A A 222 53.200 109.548 18.927 1.00 44.23 C
ATOM 8 O4' A A 222 53.828 108.505 19.714 1.00 45.00 O
ATOM 9 C3' A A 222 53.648 109.247 17.512 1.00 45.57 C
ATOM 10 O3' A A 222 53.522 110.393 16.683 1.00 49.92 O
ATOM 11 C2' A A 222 55.088 108.790 17.718 1.00 43.63 C
ATOM 12 O2' A A 222 56.003 109.847 17.919 1.00 42.45 O
ATOM 13 C1' A A 222 54.956 107.995 19.017 1.00 43.03 C
ATOM 14 N9 A A 222 54.737 106.575 18.769 1.00 39.91 N
ATOM 15 C8 A A 222 53.546 105.910 18.610 1.00 39.23 C
ATOM 16 N7 A A 222 53.688 104.628 18.377 1.00 38.41 N
ATOM 17 C5 A A 222 55.062 104.438 18.386 1.00 36.83 C
ATOM 18 C6 A A 222 55.852 103.304 18.209 1.00 36.98 C
ATOM 19 N6 A A 222 55.355 102.092 17.960 1.00 40.01 N
ATOM 20 N1 A A 222 57.193 103.451 18.294 1.00 38.08 N
ATOM 21 C2 A A 222 57.690 104.669 18.536 1.00 36.36 C
ATOM 22 N3 A A 222 57.047 105.814 18.717 1.00 36.75 N
ATOM 23 C4 A A 222 55.719 105.627 18.631 1.00 38.02 C
ATOM 24 P C A 223 53.733 110.254 15.097 1.00 53.22 P
ATOM 25 OP1 C A 223 53.603 111.626 14.536 1.00 53.29 O
ATOM 26 OP2 C A 223 52.874 109.158 14.573 1.00 52.46 O
ATOM 27 O5' C A 223 55.252 109.798 14.984 1.00 52.43 O
TER
ATOM 1 O3' A B 220 48.543 101.865 21.942 1.00 45.73 O
ATOM 2 P U B 221 48.832 102.673 20.592 1.00 44.99 P
ATOM 3 OP1 U B 221 47.506 103.109 20.087 1.00 44.77 O
ATOM 4 OP2 U B 221 49.731 101.875 19.725 1.00 41.39 O
ATOM 5 O5' U B 221 49.627 103.950 21.108 1.00 46.71 O
ATOM 6 C5' U B 221 49.019 104.851 22.058 1.00 45.94 C
ATOM 7 C4' U B 221 50.010 105.892 22.493 1.00 45.04 C
ATOM 8 O4' U B 221 51.071 105.278 23.262 1.00 46.82 O
ATOM 9 C3' U B 221 50.737 106.589 21.366 1.00 44.29 C
ATOM 10 O3' U B 221 49.919 107.623 20.849 1.00 45.76 O
ATOM 11 C2' U B 221 51.978 107.120 22.068 1.00 44.44 C
ATOM 12 O2' U B 221 51.697 108.277 22.827 1.00 45.23 O
ATOM 13 C1' U B 221 52.282 105.980 23.040 1.00 44.09 C
ATOM 14 N1 U B 221 53.294 105.026 22.570 1.00 42.99 N
ATOM 15 C2 U B 221 54.619 105.301 22.859 1.00 44.64 C
ATOM 16 O2 U B 221 54.975 106.300 23.470 1.00 45.69 O
ATOM 17 N3 U B 221 55.514 104.361 22.408 1.00 43.35 N
ATOM 18 C4 U B 221 55.224 103.204 21.714 1.00 42.61 C
ATOM 19 O4 U B 221 56.140 102.459 21.368 1.00 42.96 O
ATOM 20 C5 U B 221 53.837 102.997 21.454 1.00 41.38 C
ATOM 21 C6 U B 221 52.942 103.894 21.877 1.00 42.31 C
ATOM 22 P A B 222 49.736 107.776 19.262 1.00 47.52 P
ATOM 23 OP1 A B 222 48.777 108.899 19.095 1.00 44.16 O
ATOM 24 OP2 A B 222 49.437 106.445 18.660 1.00 43.94 O
ATOM 25 O5' A B 222 51.177 108.235 18.759 1.00 46.23 O
TER
ATOM 2 P A A 222 49.736 107.776 19.262 1.00 47.52 P
ATOM 3 OP1 A A 222 48.777 108.899 19.095 1.00 44.16 O
ATOM 4 OP2 A A 222 49.437 106.445 18.660 1.00 43.94 O
ATOM 5 O5' A A 222 51.177 108.235 18.759 1.00 46.23 O
ATOM 6 C5' A A 222 51.714 109.512 19.153 1.00 45.48 C
ATOM 7 C4' A A 222 53.200 109.548 18.927 1.00 44.23 C
ATOM 8 O4' A A 222 53.828 108.505 19.714 1.00 45.00 O
ATOM 9 C3' A A 222 53.648 109.247 17.512 1.00 45.57 C
ATOM 10 O3' A A 222 53.522 110.393 16.683 1.00 49.92 O
ATOM 11 C2' A A 222 55.088 108.790 17.718 1.00 43.63 C
ATOM 12 O2' A A 222 56.003 109.847 17.919 1.00 42.45 O
ATOM 13 C1' A A 222 54.956 107.995 19.017 1.00 43.03 C
ATOM 14 N9 A A 222 54.737 106.575 18.769 1.00 39.91 N
ATOM 15 C8 A A 222 53.546 105.910 18.610 1.00 39.23 C
ATOM 16 N7 A A 222 53.688 104.628 18.377 1.00 38.41 N
ATOM 17 C5 A A 222 55.062 104.438 18.386 1.00 36.83 C
ATOM 18 C6 A A 222 55.852 103.304 18.209 1.00 36.98 C
ATOM 19 N6 A A 222 55.355 102.092 17.960 1.00 40.01 N
ATOM 20 N1 A A 222 57.193 103.451 18.294 1.00 38.08 N
ATOM 21 C2 A A 222 57.690 104.669 18.536 1.00 36.36 C
ATOM 22 N3 A A 222 57.047 105.814 18.717 1.00 36.75 N
ATOM 23 C4 A A 222 55.719 105.627 18.631 1.00 38.02 C
ATOM 24 P C A 223 53.733 110.254 15.097 1.00 53.22 P
ATOM 25 OP1 C A 223 53.603 111.626 14.536 1.00 53.29 O
ATOM 26 OP2 C A 223 52.874 109.158 14.573 1.00 52.46 O
ATOM 27 O5' C A 223 55.252 109.798 14.984 1.00 52.43 O
TER
ATOM 1 O3' A B 220 48.543 101.865 21.942 1.00 45.73 O
ATOM 2 P U B 221 48.832 102.673 20.592 1.00 44.99 P
ATOM 3 OP1 U B 221 47.506 103.109 20.087 1.00 44.77 O
ATOM 4 OP2 U B 221 49.731 101.875 19.725 1.00 41.39 O
ATOM 5 O5' U B 221 49.627 103.950 21.108 1.00 46.71 O
ATOM 6 C5' U B 221 49.019 104.851 22.058 1.00 45.94 C
ATOM 7 C4' U B 221 50.010 105.892 22.493 1.00 45.04 C
ATOM 8 O4' U B 221 51.071 105.278 23.262 1.00 46.82 O
ATOM 9 C3' U B 221 50.737 106.589 21.366 1.00 44.29 C
ATOM 10 O3' U B 221 49.919 107.623 20.849 1.00 45.76 O
ATOM 11 C2' U B 221 51.978 107.120 22.068 1.00 44.44 C
ATOM 12 O2' U B 221 51.697 108.277 22.827 1.00 45.23 O
ATOM 13 C1' U B 221 52.282 105.980 23.040 1.00 44.09 C
ATOM 14 N1 U B 221 53.294 105.026 22.570 1.00 42.99 N
ATOM 15 C2 U B 221 54.619 105.301 22.859 1.00 44.64 C
ATOM 16 O2 U B 221 54.975 106.300 23.470 1.00 45.69 O
ATOM 17 N3 U B 221 55.514 104.361 22.408 1.00 43.35 N
ATOM 18 C4 U B 221 55.224 103.204 21.714 1.00 42.61 C
ATOM 19 O4 U B 221 56.140 102.459 21.368 1.00 42.96 O
ATOM 20 C5 U B 221 53.837 102.997 21.454 1.00 41.38 C
ATOM 21 C6 U B 221 52.942 103.894 21.877 1.00 42.31 C
ATOM 22 P A B 222 49.736 107.776 19.262 1.00 47.52 P
ATOM 23 OP1 A B 222 48.777 108.899 19.095 1.00 44.16 O
ATOM 24 OP2 A B 222 49.437 106.445 18.660 1.00 43.94 O
ATOM 25 O5' A B 222 51.177 108.235 18.759 1.00 46.23 O
TER
Atoms:
OP1: (48.777,108.899,19.095)
OP2: (49.437,106.445,18.660)
C3': (53.648,109.247,17.512)
C1': (54.956,107.995,19.017)
C5': (51.714,109.512,19.153)
O4': (53.828,108.505,19.714)
C8: (53.546,105.910,18.610)
O2': (56.003,109.847,17.919)
C6: (55.852,103.304,18.209)
C5: (55.062,104.438,18.386)
C4: (55.719,105.627,18.631)
P: (49.736,107.776,19.262)
C4': (53.200,109.548,18.927)
C2': (55.088,108.790,17.718)
C2: (57.690,104.669,18.536)
N1: (57.193,103.451,18.294)
N3: (57.047,105.814,18.717)
N6: (55.355,102.092,17.960)
N7: (53.688,104.628,18.377)
N9: (54.737,106.575,18.769)
O5': (51.177,108.235,18.759)
O3': (53.522,110.393,16.683)
OP2: (49.437,106.445,18.660)
C3': (53.648,109.247,17.512)
C1': (54.956,107.995,19.017)
C5': (51.714,109.512,19.153)
O4': (53.828,108.505,19.714)
C8: (53.546,105.910,18.610)
O2': (56.003,109.847,17.919)
C6: (55.852,103.304,18.209)
C5: (55.062,104.438,18.386)
C4: (55.719,105.627,18.631)
P: (49.736,107.776,19.262)
C4': (53.200,109.548,18.927)
C2': (55.088,108.790,17.718)
C2: (57.690,104.669,18.536)
N1: (57.193,103.451,18.294)
N3: (57.047,105.814,18.717)
N6: (55.355,102.092,17.960)
N7: (53.688,104.628,18.377)
N9: (54.737,106.575,18.769)
O5': (51.177,108.235,18.759)
O3': (53.522,110.393,16.683)
C4: (55.224,103.204,21.714)
N3: (55.514,104.361,22.408)
OP1: (47.506,103.109,20.087)
OP2: (49.731,101.875,19.725)
C2: (54.619,105.301,22.859)
C1': (52.282,105.980,23.040)
C3': (50.737,106.589,21.366)
O5': (49.627,103.950,21.108)
O4': (51.071,105.278,23.262)
C5': (49.019,104.851,22.058)
P: (48.832,102.673,20.592)
C4': (50.010,105.892,22.493)
C2': (51.978,107.120,22.068)
O2': (51.697,108.277,22.827)
N1: (53.294,105.026,22.570)
O4: (56.140,102.459,21.368)
O2: (54.975,106.300,23.470)
C6: (52.942,103.894,21.877)
C5: (53.837,102.997,21.454)
O3': (49.919,107.623,20.849)
N3: (55.514,104.361,22.408)
OP1: (47.506,103.109,20.087)
OP2: (49.731,101.875,19.725)
C2: (54.619,105.301,22.859)
C1': (52.282,105.980,23.040)
C3': (50.737,106.589,21.366)
O5': (49.627,103.950,21.108)
O4': (51.071,105.278,23.262)
C5': (49.019,104.851,22.058)
P: (48.832,102.673,20.592)
C4': (50.010,105.892,22.493)
C2': (51.978,107.120,22.068)
O2': (51.697,108.277,22.827)
N1: (53.294,105.026,22.570)
O4: (56.140,102.459,21.368)
O2: (54.975,106.300,23.470)
C6: (52.942,103.894,21.877)
C5: (53.837,102.997,21.454)
O3': (49.919,107.623,20.849)
Image (generated by PyMOL):